RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 KRBA1A5PL33 1030 aa21.22■□□□□ 0.99
SMC4-222ENST00000490207 MOSPD3O75425 235 aa21.22■□□□□ 0.99
SMC4-222ENST00000490207 ECI2O75521 394 aa21.22■□□□□ 0.99
SMC4-222ENST00000490207 GJA1P17302 382 aa21.22■□□□□ 0.99
SMC4-222ENST00000490207 NPR3P17342 541 aa21.22■□□□□ 0.99
SMC4-222ENST00000490207 RFX1P22670 979 aa21.22■□□□□ 0.99
SMC4-222ENST00000490207 TUFMP49411 452 aaKnown RBP21.22■□□□□ 0.99
SMC4-222ENST00000490207 CLCN5P51795 746 aa21.22■□□□□ 0.99
SMC4-222ENST00000490207 TRAPPC11Q7Z392 1133 aa21.22■□□□□ 0.99
SMC4-222ENST00000490207 ITIH5Q86UX2 942 aa21.22■□□□□ 0.99
SMC4-222ENST00000490207 LRRTM3Q86VH5 581 aa21.22■□□□□ 0.99
SMC4-222ENST00000490207 OSTM1Q86WC4 334 aa21.22■□□□□ 0.99
SMC4-222ENST00000490207 SHKBP1Q8TBC3 707 aa21.22■□□□□ 0.99
SMC4-222ENST00000490207 FAM200AQ8TCP9 573 aa21.22■□□□□ 0.99
SMC4-222ENST00000490207 PSMG2Q969U7 264 aa21.22■□□□□ 0.99
SMC4-222ENST00000490207 LPIN3Q9BQK8 851 aa21.22■□□□□ 0.99
SMC4-222ENST00000490207 ZNF202O95125 648 aa21.21■□□□□ 0.99
SMC4-222ENST00000490207 ATF6P18850 670 aa21.21■□□□□ 0.99
SMC4-222ENST00000490207 AOC1P19801 751 aa21.21■□□□□ 0.99
SMC4-222ENST00000490207 NUBP1P53384 320 aa21.21■□□□□ 0.99
SMC4-222ENST00000490207 PTPN5P54829 565 aa21.21■□□□□ 0.99
SMC4-222ENST00000490207 GPC5P78333 572 aa21.21■□□□□ 0.99
SMC4-222ENST00000490207 NHLH1Q02575 133 aa21.21■□□□□ 0.99
SMC4-222ENST00000490207 DPYDQ12882 1025 aa21.21■□□□□ 0.99
SMC4-222ENST00000490207 VEPH1Q14D04 833 aa21.21■□□□□ 0.99
SMC4-222ENST00000490207 TEAD2Q15562 447 aa21.21■□□□□ 0.99
SMC4-222ENST00000490207 INTS6LQ5JSJ4 861 aaKnown RBP21.21■□□□□ 0.99
SMC4-222ENST00000490207 ELSPBP1Q96BH3 223 aa21.21■□□□□ 0.99
SMC4-222ENST00000490207 ACBD6Q9BR61 282 aa21.21■□□□□ 0.99
SMC4-222ENST00000490207 LRRC3Q9BY71 257 aa21.21■□□□□ 0.99
SMC4-222ENST00000490207 KCTD10Q9H3F6 313 aa21.21■□□□□ 0.99
SMC4-222ENST00000490207 PCDHB5Q9Y5E4 795 aa21.21■□□□□ 0.99
SMC4-222ENST00000490207 OBSL1O75147 1896 aa21.2■□□□□ 0.98
SMC4-222ENST00000490207 A0A1W2PRU2 124 aa21.2■□□□□ 0.98
SMC4-222ENST00000490207 RHOBTB3O94955 611 aa21.2■□□□□ 0.98
SMC4-222ENST00000490207 HAPLN1P10915 354 aaPredicted RBP21.2■□□□□ 0.98
SMC4-222ENST00000490207 FCARP24071 287 aa21.2■□□□□ 0.98
SMC4-222ENST00000490207 ACAT1P24752 427 aaKnown RBP21.2■□□□□ 0.98
SMC4-222ENST00000490207 LHX1P48742 406 aa21.2■□□□□ 0.98
SMC4-222ENST00000490207 NFE2Q16621 373 aaPredicted RBP21.2■□□□□ 0.98
SMC4-222ENST00000490207 FAM78AQ5JUQ0 283 aa21.2■□□□□ 0.98
SMC4-222ENST00000490207 TANGO2Q6ICL3 276 aa21.2■□□□□ 0.98
SMC4-222ENST00000490207 DNAJB7Q7Z6W7 309 aaPredicted RBP21.2■□□□□ 0.98
SMC4-222ENST00000490207 ASB16Q96NS5 453 aa21.2■□□□□ 0.98
SMC4-222ENST00000490207 SLITRK6Q9H5Y7 841 aa21.2■□□□□ 0.98
SMC4-222ENST00000490207 TBC1D17Q9HA65 648 aa21.2■□□□□ 0.98
SMC4-222ENST00000490207 ZNF334Q9HCZ1 680 aaPredicted RBP21.2■□□□□ 0.98
SMC4-222ENST00000490207 TMLHEQ9NVH6 421 aa21.2■□□□□ 0.98
SMC4-222ENST00000490207 MIA3Q5JRA6 1907 aa21.19■□□□□ 0.98
SMC4-222ENST00000490207 COL4A3Q01955 1670 aa21.19■□□□□ 0.98
SMC4-222ENST00000490207 COL4A2P08572 1712 aa21.19■□□□□ 0.98
SMC4-222ENST00000490207 STK25O00506 426 aa21.19■□□□□ 0.98
SMC4-222ENST00000490207 PDXKO00764 312 aa21.19■□□□□ 0.98
SMC4-222ENST00000490207 KIF20AO95235 890 aa21.19■□□□□ 0.98
SMC4-222ENST00000490207 PCSK1P29120 753 aa21.19■□□□□ 0.98
SMC4-222ENST00000490207 TCF15Q12870 199 aa21.19■□□□□ 0.98
SMC4-222ENST00000490207 SOWAHAQ2M3V2 549 aa21.19■□□□□ 0.98
SMC4-222ENST00000490207 DPH6Q7L8W6 267 aa21.19■□□□□ 0.98
SMC4-222ENST00000490207 SLC9A9Q8IVB4 645 aa21.19■□□□□ 0.98
SMC4-222ENST00000490207 SMARCD2Q92925 531 aa21.19■□□□□ 0.98
SMC4-222ENST00000490207 CCDC34Q96HJ3 373 aa21.19■□□□□ 0.98
SMC4-222ENST00000490207 ZSWIM3Q96MP5 696 aa21.19■□□□□ 0.98
SMC4-222ENST00000490207 PLA2G2FQ9BZM2 168 aa21.19■□□□□ 0.98
SMC4-222ENST00000490207 GZF1Q9H116 711 aaPredicted RBP21.19■□□□□ 0.98
SMC4-222ENST00000490207 ZFP14Q9HCL3 533 aa21.19■□□□□ 0.98
SMC4-222ENST00000490207 DENND4CQ5VZ89 1909 aa21.19■□□□□ 0.98
SMC4-222ENST00000490207 PTPRDP23468 1912 aa21.18■□□□□ 0.98
SMC4-222ENST00000490207 GABRDO14764 452 aa21.18■□□□□ 0.98
SMC4-222ENST00000490207 GALR2O43603 387 aaPredicted RBP21.18■□□□□ 0.98
SMC4-222ENST00000490207 HCRTO43612 131 aa21.18■□□□□ 0.98
SMC4-222ENST00000490207 FGF19O95750 216 aa21.18■□□□□ 0.98
SMC4-222ENST00000490207 NR3C1P04150 777 aa21.18■□□□□ 0.98
SMC4-222ENST00000490207 GABRR2P28476 465 aa21.18■□□□□ 0.98
SMC4-222ENST00000490207 CASP4P49662 377 aa21.18■□□□□ 0.98
SMC4-222ENST00000490207 PFKPQ01813 784 aa21.18■□□□□ 0.98
SMC4-222ENST00000490207 ZSCAN18Q8TBC5 510 aaPredicted RBP21.18■□□□□ 0.98
SMC4-222ENST00000490207 PLEKHO2Q8TD55 490 aa21.18■□□□□ 0.98
SMC4-222ENST00000490207 GIPC2Q8TF65 315 aa21.18■□□□□ 0.98
SMC4-222ENST00000490207 KBTBD7Q8WVZ9 684 aa21.18■□□□□ 0.98
SMC4-222ENST00000490207 PKMYT1Q99640 499 aa21.18■□□□□ 0.98
SMC4-222ENST00000490207 PI4K2AQ9BTU6 479 aa21.18■□□□□ 0.98
SMC4-222ENST00000490207 GPR88Q9GZN0 384 aa21.18■□□□□ 0.98
SMC4-222ENST00000490207 DMAC2Q9NW81 257 aa21.18■□□□□ 0.98
SMC4-222ENST00000490207 TICRRQ7Z2Z1 1910 aa21.17■□□□□ 0.98
SMC4-222ENST00000490207 GOLGA6L4A6NEF3 574 aa21.17■□□□□ 0.98
SMC4-222ENST00000490207 LRRIQ3A6PVS8 624 aaPredicted RBP21.17■□□□□ 0.98
SMC4-222ENST00000490207 CALUO43852 315 aaPredicted RBP21.17■□□□□ 0.98
SMC4-222ENST00000490207 TRPC3Q13507 836 aa21.17■□□□□ 0.98
SMC4-222ENST00000490207 KCNB1Q14721 858 aa21.17■□□□□ 0.98
SMC4-222ENST00000490207 TAF12Q16514 161 aa21.17■□□□□ 0.98
SMC4-222ENST00000490207 GAREM2Q75VX8 874 aa21.17■□□□□ 0.98
SMC4-222ENST00000490207 LIMS2Q7Z4I7 341 aa21.17■□□□□ 0.98
SMC4-222ENST00000490207 TMEM174Q8WUU8 243 aa21.17■□□□□ 0.98
SMC4-222ENST00000490207 ZNF516Q92618 1163 aa21.17■□□□□ 0.98
SMC4-222ENST00000490207 GCNAQ96QF7 691 aa21.17■□□□□ 0.98
SMC4-222ENST00000490207 MMS19Q96T76 1030 aa21.17■□□□□ 0.98
SMC4-222ENST00000490207 ATXN3LQ9H3M9 355 aa21.17■□□□□ 0.98
SMC4-222ENST00000490207 PI15O43692 258 aa21.16■□□□□ 0.98
SMC4-222ENST00000490207 CST3P01034 146 aaPredicted RBP21.16■□□□□ 0.98
SMC4-222ENST00000490207 WARSP23381 471 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms