RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 CLUL1Q15846 466 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 KIAA0753Q2KHM9 967 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 BEAN1Q3B7T3 259 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 FAM102AQ5T9C2 384 aaPredicted RBP3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 HECTD2Q5U5R9 776 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 Q6ZVL8 140 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 PDZD4Q76G19 769 aaPredicted RBP3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 RSRC2Q7L4I2 434 aaKnown RBP3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 ARHGEF19Q8IW93 802 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 OR2C3Q8N628 320 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 LMBR1Q8WVP7 490 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 CCT6BQ92526 530 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 HPS3Q969F9 1004 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 RAX2Q96IS3 184 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 PKNOX2Q96KN3 472 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 PHACTR3Q96KR7 559 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 NEU1Q99519 415 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 RSPH9Q9H1X1 276 aaPredicted RBP3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 CYP4F11Q9HBI6 524 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 ITM2CQ9NQX7 267 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 CCM2LQ9NUG4 571 aaPredicted RBP3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 BLOC1S4Q9NUP1 217 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 TUBD1Q9UJT1 453 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 USP15Q9Y4E8 981 aaPredicted RBP3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 ERCC6Q03468 1493 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 SALL3Q9BXA9 1300 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 A0A1B0GVC2 190 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 KLHL33A6NCF5 533 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 SERINC4A6NH21 518 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 DRGXA6NNA5 263 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 CXorf49A8MYA2 514 aaPredicted RBP3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 RASA4BC9J798 803 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 DIRC3C9JPN6 131 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 NCAM2O15394 837 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 RASA4O43374 803 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 PHF2O75151 1096 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 MBD4O95243 580 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 GLULP15104 373 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 VEGFAP15692 232 aaPredicted RBP3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 HSPA6P17066 643 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 MGAT1P26572 445 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 ADD2P35612 726 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 PPM1AP35813 382 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 FLT3LGP49771 235 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 CHN2P52757 468 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 KRT85P78386 507 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 MPP1Q00013 466 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 G3BP1Q13283 466 aaKnown RBP eCLIP3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 MST1LQ2TV78 715 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 FAM47AQ5JRC9 791 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 AGAP9Q5VTM2 703 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 Q6YL49 198 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 PLXDC1Q8IUK5 500 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 TRMT2AQ8IZ69 625 aaKnown RBP3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 CPEB3Q8NE35 698 aaKnown RBP3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 GPR156Q8NFN8 814 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 ZFP28Q8NHY6 868 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 DEPTORQ8TB45 409 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 TBC1D20Q96BZ9 403 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 PAWRQ96IZ0 340 aaKnown RBP3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 NT5C1BQ96P26 610 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 B3GNT5Q9BYG0 378 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 SMYD2Q9NRG4 433 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 FBXO2Q9UK22 296 aaPredicted RBP3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 TMX2Q9Y320 296 aa3.76□□□□□ -1.81
DEPDC1-204ENST00000489862 PNPLA7Q6ZV29 1317 aa3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 CUX2O14529 1486 aa3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 GAGE12BA1L429 117 aa3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 GAGE12HA6NDE8 117 aa3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 MYADML2A6NDP7 307 aa3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 OFD1O75665 1012 aa3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 TUSC2O75896 110 aa3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 ALDH2P05091 517 aa3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 POU2F2P09086 479 aa3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 IFIT1P09914 478 aaKnown RBP3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 OSMP13725 252 aa3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 CLRN1P58418 232 aa3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 MRPS9P82933 396 aaKnown RBP3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 ADRM1Q16186 407 aa3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 TOR2AQ5JU69 321 aa3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 ATXN7L2Q5T6C5 722 aaPredicted RBP3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 TLDC1Q6P9B6 456 aa3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 KCNK18Q7Z418 384 aa3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 OR8H2Q8N162 312 aa3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 Q8N9P0 234 aaPredicted RBP3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 STON2Q8WXE9 905 aa3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 AUTS2Q8WXX7 1259 aa3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 ADAM2Q99965 735 aa3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 TOR3AQ9H497 397 aa3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 RIC8AQ9NPQ8 531 aa3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 DMRT3Q9NQL9 472 aa3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 LRRFIP2Q9Y608 721 aaKnown RBP3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 ATRNL1Q5VV63 1379 aa3.75□□□□□ -1.81
DEPDC1-204ENST00000489862 SPATA31A6Q5VVP1 1343 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 WASHC2AQ641Q2 1341 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 MRC2Q9UBG0 1479 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 A0A087WV62 115 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 KIAA0355O15063 1070 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 GFPT2O94808 682 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms