RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 IER5Q5VY09 327 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 LMBRD2Q68DH5 695 aaPredicted RBP10.38□□□□□ -0.75
NOD1-208ENST00000489614 MAP7D3Q8IWC1 876 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 KLHL7Q8IXQ5 586 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 PTPRN2Q92932 1015 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 SLC35C1Q96A29 364 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 RNPEPL1Q9HAU8 725 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 ETNK1Q9HBU6 452 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 PTPRHQ9HD43 1115 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 SIX2Q9NPC8 291 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 UTP6Q9NYH9 597 aaKnown RBP10.38□□□□□ -0.75
NOD1-208ENST00000489614 CAPN11Q9UMQ6 739 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 TSC2P49815 1807 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 K7ENM7 598 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 P4HA2O15460 535 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 AKR1B10O60218 316 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 CYP1A1P04798 512 aaPredicted RBP10.37□□□□□ -0.75
NOD1-208ENST00000489614 PEX3P56589 373 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 TNFAIP2Q03169 654 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 TRIM14Q14142 442 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 MEA1Q16626 185 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 AMHR2Q16671 573 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 TMEM53Q6P2H8 277 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 STXBP4Q6ZWJ1 553 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 CACNA2D4Q7Z3S7 1137 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 OLIG1Q8TAK6 271 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 LMO3Q8TAP4 145 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 ZNF653Q96CK0 615 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 IFT74Q96LB3 600 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 PRMT1Q99873 361 aaKnown RBP10.37□□□□□ -0.75
NOD1-208ENST00000489614 GANQ9H2C0 597 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 FBXL5Q9UKA1 691 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 ITM2BQ9Y287 266 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 HYOU1Q9Y4L1 999 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 GMEB1Q9Y692 573 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 MSCO60682 206 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 CCDC166P0CW27 439 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 TPBGLP0DKB5 382 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 NR2F2P24468 414 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 VARSP26640 1264 aaKnown RBP10.37□□□□□ -0.75
NOD1-208ENST00000489614 CST5P28325 142 aaPredicted RBP10.37□□□□□ -0.75
NOD1-208ENST00000489614 VEGFBP49765 207 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 KRT83P78385 493 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 ERMARDQ5T6L9 678 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 FAM102BQ5T8I3 360 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 TMCO5AQ8N6Q1 288 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 KLHDC9Q8NEP7 349 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 BAP1Q92560 729 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 RNF25Q96BH1 459 aaPredicted RBP10.37□□□□□ -0.75
NOD1-208ENST00000489614 MFSD14AQ96MC6 490 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 RAB17Q9H0T7 212 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 EFR3BQ9Y2G0 817 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 LUC7L2Q9Y383 392 aaKnown RBP10.37□□□□□ -0.75
NOD1-208ENST00000489614 SLC16A4O15374 487 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 ADCY3O60266 1144 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 ADAMTS4O75173 837 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 GARTP22102 1010 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 GALK1P51570 392 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 DMP1Q13316 513 aaPredicted RBP10.37□□□□□ -0.75
NOD1-208ENST00000489614 BRDTQ58F21 947 aaPredicted RBP10.37□□□□□ -0.75
NOD1-208ENST00000489614 PRAMEF19Q5SWL8 479 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 WDR78Q5VTH9 848 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 ZNF280DQ6N043 979 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 C15orf39Q6ZRI6 1047 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 ZSWIM2Q8NEG5 633 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 OR6J1Q8NGC5 347 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 TTC8Q8TAM2 541 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 UHMK1Q8TAS1 419 aaKnown RBP10.37□□□□□ -0.75
NOD1-208ENST00000489614 IQCDQ96DY2 449 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 ZNF317Q96PQ6 595 aaPredicted RBP10.37□□□□□ -0.75
NOD1-208ENST00000489614 ARHGEF3Q9NR81 526 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 HSFX1Q9UBD0 423 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 HEY1Q9Y5J3 304 aa10.37□□□□□ -0.75
NOD1-208ENST00000489614 A0A0J9YVX5 310 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 TISP43B9A030 160 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 H0YCG3 227 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 ENTPD5O75356 428 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 GNRH1P01148 92 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 GSTA2P09210 222 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 GM2AP17900 193 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 CDK17Q00537 523 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 ITIH4Q14624 930 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 CCDC6Q16204 474 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 UAP1Q16222 522 aaPredicted RBP10.36□□□□□ -0.75
NOD1-208ENST00000489614 GRAMD4Q6IC98 578 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 IRGCQ6NXR0 463 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 ZNF554Q86TJ5 538 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 IQCF2Q8IXL9 164 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 STK32AQ8WU08 396 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 HAUS1Q96CS2 278 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 NMD3Q96D46 503 aaKnown RBP10.36□□□□□ -0.75
NOD1-208ENST00000489614 KIFC3Q9BVG8 833 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 SPATA16Q9BXB7 569 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 EDEM3Q9BZQ6 932 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 FAM129AQ9BZQ8 928 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 FZD8Q9H461 694 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 IFT122Q9HBG6 1241 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 SPO11Q9Y5K1 396 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 ANO9A1A5B4 782 aa10.36□□□□□ -0.75
NOD1-208ENST00000489614 EPHB6O15197 1021 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms