RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 PTPAQ15257 358 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 FAM187BQ17R55 369 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 USP39Q53GS9 565 aaKnown RBP10.07□□□□□ -0.8
SSBP1-212ENST00000489378 NCAPH2Q6IBW4 605 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 MOXD1Q6UVY6 613 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 CCNI2Q6ZMN8 369 aaPredicted RBP10.07□□□□□ -0.8
SSBP1-212ENST00000489378 ARMCX6Q7L4S7 300 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 DHX32Q7L7V1 743 aaKnown RBP10.07□□□□□ -0.8
SSBP1-212ENST00000489378 C11orf74Q86VG3 221 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 TPH2Q8IWU9 490 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 PNPLA1Q8N8W4 532 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 BEST2Q8NFU1 509 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 TSTD1Q8NFU3 115 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 HAS1Q92839 578 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 PGLYRP2Q96PD5 576 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 NUSAP1Q9BXS6 441 aaKnown RBP10.07□□□□□ -0.8
SSBP1-212ENST00000489378 ATXN3LQ9H3M9 355 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 EBF3Q9H4W6 596 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 MAFFQ9ULX9 164 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 GOLGA4Q13439 2230 aaKnown RBP10.06□□□□□ -0.8
SSBP1-212ENST00000489378 A0A087WWV3 80 aa10.06□□□□□ -0.8
SSBP1-212ENST00000489378 CCDC196A0A1B0GTZ2 297 aa10.06□□□□□ -0.8
SSBP1-212ENST00000489378 M0R2N6 131 aa10.06□□□□□ -0.8
SSBP1-212ENST00000489378 SLITRK3O94933 977 aa10.06□□□□□ -0.8
SSBP1-212ENST00000489378 OR4Q2P0C623 313 aa10.06□□□□□ -0.8
SSBP1-212ENST00000489378 ARSAP15289 507 aa10.06□□□□□ -0.8
SSBP1-212ENST00000489378 LIG1P18858 919 aa10.06□□□□□ -0.8
SSBP1-212ENST00000489378 DRD1P21728 446 aa10.06□□□□□ -0.8
SSBP1-212ENST00000489378 GABRR2P28476 465 aa10.06□□□□□ -0.8
SSBP1-212ENST00000489378 PTGER3P43115 390 aa10.06□□□□□ -0.8
SSBP1-212ENST00000489378 EPHB3P54753 998 aa10.06□□□□□ -0.8
SSBP1-212ENST00000489378 CYP4F8P98187 520 aa10.06□□□□□ -0.8
SSBP1-212ENST00000489378 AKAP17AQ02040 695 aaKnown RBP10.06□□□□□ -0.8
SSBP1-212ENST00000489378 INF2Q27J81 1249 aa10.06□□□□□ -0.8
SSBP1-212ENST00000489378 CDCA2Q69YH5 1023 aaPredicted RBP10.06□□□□□ -0.8
SSBP1-212ENST00000489378 ZNF280DQ6N043 979 aa10.06□□□□□ -0.8
SSBP1-212ENST00000489378 MAEAQ7L5Y9 396 aa10.06□□□□□ -0.8
SSBP1-212ENST00000489378 OR2I1PQ8NGU4 316 aa10.06□□□□□ -0.8
SSBP1-212ENST00000489378 FAM20AQ96MK3 541 aa10.06□□□□□ -0.8
SSBP1-212ENST00000489378 CAMK1GQ96NX5 476 aa10.06□□□□□ -0.8
SSBP1-212ENST00000489378 SLC26A6Q9BXS9 759 aa10.06□□□□□ -0.8
SSBP1-212ENST00000489378 C22orf23Q9BZE7 217 aa10.06□□□□□ -0.8
SSBP1-212ENST00000489378 THG1LQ9NWX6 298 aaKnown RBP10.06□□□□□ -0.8
SSBP1-212ENST00000489378 TPCN1Q9ULQ1 816 aa10.06□□□□□ -0.8
SSBP1-212ENST00000489378 PCDHA4Q9UN74 947 aa10.06□□□□□ -0.8
SSBP1-212ENST00000489378 ATXN2Q99700 1313 aaKnown RBP10.06□□□□□ -0.8
SSBP1-212ENST00000489378 PTPRBP23467 1997 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 SOAT2O75908 522 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 CD59P13987 128 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 DUSP4Q13115 394 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 NTRK3Q16288 839 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 ADCK5Q3MIX3 580 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 FBXO43Q4G163 708 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 ANO7Q6IWH7 933 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 DNAJB7Q7Z6W7 309 aaPredicted RBP10.05□□□□□ -0.8
SSBP1-212ENST00000489378 RASSF3Q86WH2 238 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 SYT12Q8IV01 421 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 LURAP1LQ8IV03 231 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 TMEFF1Q8IYR6 380 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 HDDC3Q8N4P3 179 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 TTC9BQ8N6N2 239 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 FRMD1Q8N878 549 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 RLN3Q8WXF3 142 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 ADAMTS14Q8WXS8 1223 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 BSNDQ8WZ55 320 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 ACDQ96AP0 544 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 ZMAT2Q96NC0 199 aaKnown RBP10.05□□□□□ -0.8
SSBP1-212ENST00000489378 UBL7Q96S82 380 aaPredicted RBP10.05□□□□□ -0.8
SSBP1-212ENST00000489378 P2RY13Q9BPV8 354 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 ADPGKQ9BRR6 497 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 GTPBP2Q9BX10 602 aaKnown RBP10.05□□□□□ -0.8
SSBP1-212ENST00000489378 CCDC113Q9H0I3 377 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 TASP1Q9H6P5 420 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 CCL26Q9Y258 94 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 NUB1Q9Y5A7 615 aa10.05□□□□□ -0.8
SSBP1-212ENST00000489378 ANTXRLA6NF34 631 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 TNFRSF10BO14763 440 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 USO1O60763 962 aaKnown RBP10.04□□□□□ -0.8
SSBP1-212ENST00000489378 CFIP05156 583 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 FTH1P19P0C7X4 201 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 WEE1P30291 646 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 RARRES1P49788 294 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 SMCPP49901 116 aaPredicted RBP10.04□□□□□ -0.8
SSBP1-212ENST00000489378 PSMD2Q13200 908 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 PLD1Q13393 1074 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 NPY5RQ15761 445 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 MAPK6Q16659 721 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 ARHGAP15Q53QZ3 475 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 SLC23A3Q6PIS1 610 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 ZBTB8OSQ8IWT0 167 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 BLIDQ8IZY5 108 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 CYP4X1Q8N118 509 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 CEP120Q8N960 986 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 MDGA1Q8NFP4 955 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 RIN3Q8TB24 985 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 SUSD3Q96L08 255 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 PCDH15Q96QU1 1955 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 FNBP1Q96RU3 617 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 SLC46A2Q9BY10 475 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms