RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 A0A1W2PRU2 124 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 H0Y858 1186 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 PI15O43692 258 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 MOSPD3O75425 235 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 FCARP24071 287 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 LHX1P48742 406 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 CYP2J2P51589 502 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 PSMD2Q13200 908 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 TEAD2Q15562 447 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 TAF12Q16514 161 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 KNOP1Q1ED39 458 aaKnown RBP14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 ARHGAP15Q53QZ3 475 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 FAM78AQ5JUQ0 283 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 LMBRD2Q68DH5 695 aaPredicted RBP14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 TANGO2Q6ICL3 276 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 DPH6Q7L8W6 267 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 C12orf56Q8IXR9 622 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 TTC9BQ8N6N2 239 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 DTWD2Q8NBA8 298 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 PJA1Q8NG27 643 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 CXorf38Q8TB03 319 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 SHKBP1Q8TBC3 707 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 PAGE5Q96GU1 130 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 ACBD6Q9BR61 282 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 LRRC3Q9BY71 257 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 TRPV4Q9HBA0 871 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 DDX43Q9NXZ2 648 aaKnown RBP14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 ABI2Q9NYB9 513 aaPredicted RBP14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 SIX4Q9UIU6 781 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 SIT1Q9Y3P8 196 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 SNX9Q9Y5X1 595 aa14.84□□□□□ -0.03
SPTLC1-207ENST00000488921 A0A1B0GVL5 298 aa14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 KANSL1LA0AUZ9 987 aa14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 CLIC2O15247 247 aa14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 PSMC3P17980 439 aa14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 TNNI1P19237 187 aa14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 PCSK1P29120 753 aa14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 CDC25CP30307 473 aa14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 SNW1Q13573 536 aaKnown RBP14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 PSMD6Q15008 389 aa14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 SLC44A4Q53GD3 710 aa14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 DNAJB7Q7Z6W7 309 aaPredicted RBP14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 GRAMD1CQ8IYS0 662 aa14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 ADGRF2Q8IZF7 708 aa14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 ZSCAN18Q8TBC5 510 aaPredicted RBP14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 IRF7Q92985 503 aa14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 CCDC47Q96A33 483 aaKnown RBP14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 HPDLQ96IR7 371 aa14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 CGRRF1Q99675 332 aa14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 DDX23Q9BUQ8 820 aaKnown RBP14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 TRMT61BQ9BVS5 477 aaKnown RBP14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 PLA2G2FQ9BZM2 168 aa14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 BRD9Q9H8M2 597 aa14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 ABCB6Q9NP58 842 aa14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 ZMYM5Q9UJ78 669 aa14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 HPSEQ9Y251 543 aa14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 ZDHHC9Q9Y397 364 aa14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 PTPRJQ12913 1337 aa14.83□□□□□ -0.04
SPTLC1-207ENST00000488921 PTPRDP23468 1912 aa14.82□□□□□ -0.04
SPTLC1-207ENST00000488921 SOAT2O75908 522 aa14.82□□□□□ -0.04
SPTLC1-207ENST00000488921 KIF20AO95235 890 aa14.82□□□□□ -0.04
SPTLC1-207ENST00000488921 DLATP10515 647 aaKnown RBP14.82□□□□□ -0.04
SPTLC1-207ENST00000488921 HAPLN1P10915 354 aaPredicted RBP14.82□□□□□ -0.04
SPTLC1-207ENST00000488921 GJA1P17302 382 aa14.82□□□□□ -0.04
SPTLC1-207ENST00000488921 ATF6P18850 670 aa14.82□□□□□ -0.04
SPTLC1-207ENST00000488921 GABRR2P28476 465 aa14.82□□□□□ -0.04
SPTLC1-207ENST00000488921 MAGEA9P43362 315 aa14.82□□□□□ -0.04
SPTLC1-207ENST00000488921 SYKP43405 635 aa14.82□□□□□ -0.04
SPTLC1-207ENST00000488921 CYP24A1Q07973 514 aa14.82□□□□□ -0.04
SPTLC1-207ENST00000488921 ANGPT1Q15389 498 aa14.82□□□□□ -0.04
SPTLC1-207ENST00000488921 INTS6LQ5JSJ4 861 aaKnown RBP14.82□□□□□ -0.04
SPTLC1-207ENST00000488921 POTEHQ6S545 545 aa14.82□□□□□ -0.04
SPTLC1-207ENST00000488921 RDH13Q8NBN7 331 aa14.82□□□□□ -0.04
SPTLC1-207ENST00000488921 OR5B17Q8NGF7 314 aa14.82□□□□□ -0.04
SPTLC1-207ENST00000488921 CCDC34Q96HJ3 373 aa14.82□□□□□ -0.04
SPTLC1-207ENST00000488921 ZSWIM3Q96MP5 696 aa14.82□□□□□ -0.04
SPTLC1-207ENST00000488921 OSBPL6Q9BZF3 934 aa14.82□□□□□ -0.04
SPTLC1-207ENST00000488921 ATXN3LQ9H3M9 355 aa14.82□□□□□ -0.04
SPTLC1-207ENST00000488921 FAM86C1Q9NVL1 165 aa14.82□□□□□ -0.04
SPTLC1-207ENST00000488921 MRPS17Q9Y2R5 130 aaKnown RBP14.82□□□□□ -0.04
SPTLC1-207ENST00000488921 KIF26AQ9ULI4 1882 aaPredicted RBP14.82□□□□□ -0.04
SPTLC1-207ENST00000488921 FAM237AA0A1B0GTK4 181 aa14.81□□□□□ -0.04
SPTLC1-207ENST00000488921 KLRC4O43908 158 aa14.81□□□□□ -0.04
SPTLC1-207ENST00000488921 EXOC3O60645 756 aa14.81□□□□□ -0.04
SPTLC1-207ENST00000488921 RPL10AP62906 217 aaKnown RBP14.81□□□□□ -0.04
SPTLC1-207ENST00000488921 GRM2Q14416 872 aa14.81□□□□□ -0.04
SPTLC1-207ENST00000488921 KMT5BQ4FZB7 885 aa14.81□□□□□ -0.04
SPTLC1-207ENST00000488921 VITQ6UXI7 678 aa14.81□□□□□ -0.04
SPTLC1-207ENST00000488921 TPRG1Q6ZUI0 275 aa14.81□□□□□ -0.04
SPTLC1-207ENST00000488921 GAREM2Q75VX8 874 aa14.81□□□□□ -0.04
SPTLC1-207ENST00000488921 TRAPPC11Q7Z392 1133 aa14.81□□□□□ -0.04
SPTLC1-207ENST00000488921 LRRTM3Q86VH5 581 aa14.81□□□□□ -0.04
SPTLC1-207ENST00000488921 MFSD6LQ8IWD5 586 aa14.81□□□□□ -0.04
SPTLC1-207ENST00000488921 YAF2Q8IY57 180 aa14.81□□□□□ -0.04
SPTLC1-207ENST00000488921 CCDC127Q96BQ5 260 aa14.81□□□□□ -0.04
SPTLC1-207ENST00000488921 FUBP3Q96I24 572 aaKnown RBP eCLIP14.81□□□□□ -0.04
SPTLC1-207ENST00000488921 FAM84AQ96KN4 292 aa14.81□□□□□ -0.04
SPTLC1-207ENST00000488921 NELL2Q99435 816 aa14.81□□□□□ -0.04
SPTLC1-207ENST00000488921 LPIN3Q9BQK8 851 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms