RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 GCNT3O95395 438 aa28.02■■■□□ 2.08
RNF220-216ENST00000488865 LDHAP00338 332 aaKnown RBP28.02■■■□□ 2.08
RNF220-216ENST00000488865 HAPLN1P10915 354 aaPredicted RBP28.02■■■□□ 2.08
RNF220-216ENST00000488865 KPNA1P52294 538 aaPredicted RBP28.02■■■□□ 2.08
RNF220-216ENST00000488865 CEBPZQ03701 1054 aaKnown RBP28.02■■■□□ 2.08
RNF220-216ENST00000488865 BRSK2Q8IWQ3 736 aa28.02■■■□□ 2.08
RNF220-216ENST00000488865 DCP1BQ8IZD4 617 aaKnown RBP28.02■■■□□ 2.08
RNF220-216ENST00000488865 GPR161Q8N6U8 529 aaKnown RBP28.02■■■□□ 2.08
RNF220-216ENST00000488865 SECISBP2LQ93073 1101 aaKnown RBP28.02■■■□□ 2.08
RNF220-216ENST00000488865 LRRC3BQ96PB8 259 aa28.02■■■□□ 2.08
RNF220-216ENST00000488865 GCNAQ96QF7 691 aa28.02■■■□□ 2.08
RNF220-216ENST00000488865 IL21Q9HBE4 155 aa28.02■■■□□ 2.08
RNF220-216ENST00000488865 SMG5Q9UPR3 1016 aaKnown RBP28.02■■■□□ 2.08
RNF220-216ENST00000488865 CACNA1AO00555 2505 aa28.01■■■□□ 2.08
RNF220-216ENST00000488865 FRMD3A2A2Y4 597 aa28.01■■■□□ 2.07
RNF220-216ENST00000488865 MYBPHLA2RUH7 354 aa28.01■■■□□ 2.07
RNF220-216ENST00000488865 GARTP22102 1010 aa28.01■■■□□ 2.07
RNF220-216ENST00000488865 LRRC32Q14392 662 aa28.01■■■□□ 2.07
RNF220-216ENST00000488865 TAF12Q16514 161 aa28.01■■■□□ 2.07
RNF220-216ENST00000488865 RALGPS2Q86X27 583 aaPredicted RBP28.01■■■□□ 2.07
RNF220-216ENST00000488865 GPIHBP1Q8IV16 184 aa28.01■■■□□ 2.07
RNF220-216ENST00000488865 CACTINQ8WUQ7 758 aaKnown RBP28.01■■■□□ 2.07
RNF220-216ENST00000488865 INTS4Q96HW7 963 aaKnown RBP28.01■■■□□ 2.07
RNF220-216ENST00000488865 SLC38A8A6NNN8 435 aa28■■■□□ 2.07
RNF220-216ENST00000488865 STAT6P42226 847 aa28■■■□□ 2.07
RNF220-216ENST00000488865 TFAMQ00059 246 aaKnown RBP28■■■□□ 2.07
RNF220-216ENST00000488865 PLCB2Q00722 1185 aa28■■■□□ 2.07
RNF220-216ENST00000488865 SLC39A14Q15043 492 aa28■■■□□ 2.07
RNF220-216ENST00000488865 SYCP3Q8IZU3 236 aa28■■■□□ 2.07
RNF220-216ENST00000488865 ABI2Q9NYB9 513 aaPredicted RBP28■■■□□ 2.07
RNF220-216ENST00000488865 IDEP14735 1019 aa27.99■■■□□ 2.07
RNF220-216ENST00000488865 POLR2BP30876 1174 aaKnown RBP27.99■■■□□ 2.07
RNF220-216ENST00000488865 CASP5P51878 434 aa27.99■■■□□ 2.07
RNF220-216ENST00000488865 WNT7BP56706 349 aa27.99■■■□□ 2.07
RNF220-216ENST00000488865 CYP4F8P98187 520 aa27.99■■■□□ 2.07
RNF220-216ENST00000488865 TSPY1Q01534 308 aa27.99■■■□□ 2.07
RNF220-216ENST00000488865 PUM1Q14671 1186 aaKnown RBP eCLIP27.99■■■□□ 2.077e-7■□□□□ 9.3
RNF220-216ENST00000488865 SPEM1Q8N4L4 309 aa27.99■■■□□ 2.07
RNF220-216ENST00000488865 ZSWIM2Q8NEG5 633 aa27.99■■■□□ 2.07
RNF220-216ENST00000488865 BPIFB1Q8TDL5 484 aa27.99■■■□□ 2.07
RNF220-216ENST00000488865 GIPC2Q8TF65 315 aa27.99■■■□□ 2.07
RNF220-216ENST00000488865 SAAL1Q96ER3 474 aa27.99■■■□□ 2.07
RNF220-216ENST00000488865 USP28Q96RU2 1077 aa27.99■■■□□ 2.07
RNF220-216ENST00000488865 ZSCAN16Q9H4T2 348 aaPredicted RBP27.99■■■□□ 2.07
RNF220-216ENST00000488865 RBAKQ9NYW8 714 aaPredicted RBP27.99■■■□□ 2.07
RNF220-216ENST00000488865 PCDHB5Q9Y5E4 795 aa27.99■■■□□ 2.07
RNF220-216ENST00000488865 SPECC1L-ADORA2AF8WAN1 911 aa27.98■■■□□ 2.07
RNF220-216ENST00000488865 PRAMEF12O95522 483 aa27.98■■■□□ 2.07
RNF220-216ENST00000488865 ITGB3P05106 788 aa27.98■■■□□ 2.07
RNF220-216ENST00000488865 CTHP32929 405 aa27.98■■■□□ 2.07
RNF220-216ENST00000488865 CXCL12P48061 93 aa27.98■■■□□ 2.07
RNF220-216ENST00000488865 CDR1P51861 262 aa27.98■■■□□ 2.07
RNF220-216ENST00000488865 NFE2Q16621 373 aaPredicted RBP27.98■■■□□ 2.07
RNF220-216ENST00000488865 LRRC52Q8N7C0 313 aa27.98■■■□□ 2.07
RNF220-216ENST00000488865 C1orf127Q8N9H9 656 aa27.98■■■□□ 2.07
RNF220-216ENST00000488865 ZFYVE19Q96K21 471 aa27.98■■■□□ 2.07
RNF220-216ENST00000488865 SLC46A2Q9BY10 475 aa27.98■■■□□ 2.07
RNF220-216ENST00000488865 PANK4Q9NVE7 773 aa27.98■■■□□ 2.07
RNF220-216ENST00000488865 GTSE1Q9NYZ3 720 aa27.98■■■□□ 2.07
RNF220-216ENST00000488865 AGAP1Q9UPQ3 857 aa27.98■■■□□ 2.07
RNF220-216ENST00000488865 MTMR6Q9Y217 621 aa27.98■■■□□ 2.07
RNF220-216ENST00000488865 DNAH14Q0VDD8 3507 aa27.97■■■□□ 2.07
RNF220-216ENST00000488865 EXTL3O43909 919 aa27.97■■■□□ 2.07
RNF220-216ENST00000488865 SOX9P48436 509 aa27.97■■■□□ 2.07
RNF220-216ENST00000488865 GAS6Q14393 721 aa27.97■■■□□ 2.07
RNF220-216ENST00000488865 DGKKQ5KSL6 1271 aa27.97■■■□□ 2.07
RNF220-216ENST00000488865 PDCL2Q8N4E4 241 aa27.97■■■□□ 2.07
RNF220-216ENST00000488865 CELF5Q8N6W0 485 aaKnown RBP27.97■■■□□ 2.07
RNF220-216ENST00000488865 LEO1Q8WVC0 666 aaPredicted RBP27.97■■■□□ 2.07
RNF220-216ENST00000488865 ACBD6Q9BR61 282 aa27.97■■■□□ 2.07
RNF220-216ENST00000488865 PANK2Q9BZ23 570 aa27.97■■■□□ 2.07
RNF220-216ENST00000488865 TMEM206Q9H813 350 aa27.97■■■□□ 2.07
RNF220-216ENST00000488865 THG1LQ9NWX6 298 aaKnown RBP27.97■■■□□ 2.07
RNF220-216ENST00000488865 DLL3Q9NYJ7 618 aa27.97■■■□□ 2.07
RNF220-216ENST00000488865 ITGA11Q9UKX5 1188 aa27.97■■■□□ 2.07
RNF220-216ENST00000488865 A0A087X0B3 334 aa27.96■■■□□ 2.07
RNF220-216ENST00000488865 HUS1O60921 280 aa27.96■■■□□ 2.07
RNF220-216ENST00000488865 HMGA1P17096 107 aaKnown RBP27.96■■■□□ 2.07
RNF220-216ENST00000488865 DDX6P26196 483 aaKnown RBP eCLIP27.96■■■□□ 2.07
RNF220-216ENST00000488865 SATB1Q01826 763 aa27.96■■■□□ 2.07
RNF220-216ENST00000488865 DGLUCYQ7Z3D6 616 aa27.96■■■□□ 2.07
RNF220-216ENST00000488865 CMTM8Q8IZV2 173 aa27.96■■■□□ 2.07
RNF220-216ENST00000488865 TMEM86AQ8N2M4 240 aa27.96■■■□□ 2.07
RNF220-216ENST00000488865 CXorf38Q8TB03 319 aa27.96■■■□□ 2.07
RNF220-216ENST00000488865 SPATA18Q8TC71 538 aa27.96■■■□□ 2.07
RNF220-216ENST00000488865 CBWD1Q9BRT8 395 aa27.96■■■□□ 2.07
RNF220-216ENST00000488865 TMLHEQ9NVH6 421 aa27.96■■■□□ 2.07
RNF220-216ENST00000488865 L1RE1Q9UN81 338 aa27.96■■■□□ 2.07
RNF220-216ENST00000488865 CEP250Q9BV73 2442 aa27.96■■■□□ 2.07
RNF220-216ENST00000488865 SOBPA7XYQ1 873 aa27.95■■■□□ 2.06
RNF220-216ENST00000488865 PAPSS2O95340 614 aaPredicted RBP27.95■■■□□ 2.06
RNF220-216ENST00000488865 F11P03951 625 aa27.95■■■□□ 2.06
RNF220-216ENST00000488865 NLRP12P59046 1061 aa27.95■■■□□ 2.06
RNF220-216ENST00000488865 TXNDC11Q6PKC3 985 aa27.95■■■□□ 2.06
RNF220-216ENST00000488865 TMEM150AQ86TG1 271 aa27.95■■■□□ 2.06
RNF220-216ENST00000488865 CCDC65Q8IXS2 484 aa27.95■■■□□ 2.06
RNF220-216ENST00000488865 CSGALNACT2Q8N6G5 542 aa27.95■■■□□ 2.06
RNF220-216ENST00000488865 FGFBP2Q9BYJ0 223 aa27.95■■■□□ 2.06
RNF220-216ENST00000488865 ABCB6Q9NP58 842 aa27.95■■■□□ 2.06
RNF220-216ENST00000488865 RBM12Q9NTZ6 932 aaKnown RBP27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms