RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 MRPL17Q9NRX2 175 aaKnown RBP13.14□□□□□ -0.31
TRAIP-209ENST00000488860 CHD7Q9P2D1 2997 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 LZTS1Q9Y250 596 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 LUC7L2Q9Y383 392 aaKnown RBP13.14□□□□□ -0.31
TRAIP-209ENST00000488860 NME7Q9Y5B8 376 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 MYO16Q9Y6X6 1858 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 LAMA3Q16787 3333 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 MYO9BQ13459 2157 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 PATJQ8NI35 1801 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 EPOPA6NHQ4 379 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 H3BNC9 293 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 RNF225M0QZC1 329 aaPredicted RBP13.13□□□□□ -0.31
TRAIP-209ENST00000488860 FOXN3O00409 490 aaPredicted RBP13.13□□□□□ -0.31
TRAIP-209ENST00000488860 LPXNO60711 386 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 MFAP3LO75121 409 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 EFEMP2O95967 443 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 CALCAP01258 141 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 OR4Q2P0C623 313 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 CTSAP10619 480 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 CPB1P15086 417 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 CD19P15391 556 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 RPL17P18621 184 aaKnown RBP13.13□□□□□ -0.31
TRAIP-209ENST00000488860 DNAJB1P25685 340 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 LMO2P25791 158 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 PCSK1P29120 753 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 KRT9P35527 623 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 SOX5P35711 763 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 ZBED6P86452 979 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 TSPY1Q01534 308 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 DSG1Q02413 1049 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 UBE3AQ05086 875 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 SMC1AQ14683 1233 aaKnown RBP13.13□□□□□ -0.31
TRAIP-209ENST00000488860 BMS1Q14692 1282 aaKnown RBP13.13□□□□□ -0.31
TRAIP-209ENST00000488860 ASIC2Q16515 512 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 CCDC142Q17RM4 750 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 ACOT1Q86TX2 421 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 OR10T2Q8NGX3 314 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 SPATA18Q8TC71 538 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 MICAL1Q8TDZ2 1067 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 PIK3R5Q8WYR1 880 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 JAKMIP2Q96AA8 810 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 TMEM176AQ96HP8 235 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 RTP3Q9BQQ7 232 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 DNAI2Q9GZS0 605 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 CAPN11Q9UMQ6 739 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 STXBP5LQ9Y2K9 1186 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 PCDHGC5Q9Y5F6 944 aa13.13□□□□□ -0.31
TRAIP-209ENST00000488860 MTCL1Q9Y4B5 1905 aaKnown RBP13.13□□□□□ -0.31
TRAIP-209ENST00000488860 OR6C75A6NL08 312 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 AKR1B15C9JRZ8 316 aaPredicted RBP13.12□□□□□ -0.31
TRAIP-209ENST00000488860 RFXAPO00287 272 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 SOX1O00570 391 aaPredicted RBP13.12□□□□□ -0.31
TRAIP-209ENST00000488860 GABRDO14764 452 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 CYP26A1O43174 497 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 ATP2C2O75185 946 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 CXCL14O95715 111 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 GNA15P30679 374 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 RAD23BP54727 409 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 ADKP55263 362 aaKnown RBP13.12□□□□□ -0.31
TRAIP-209ENST00000488860 ERVFC1P60507 584 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 TBX2Q13207 712 aaPredicted RBP13.12□□□□□ -0.31
TRAIP-209ENST00000488860 PTPN14Q15678 1187 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 MDH1BQ5I0G3 518 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 INTS6LQ5JSJ4 861 aaKnown RBP13.12□□□□□ -0.31
TRAIP-209ENST00000488860 SFMBT2Q5VUG0 894 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 UNC93AQ86WB7 457 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 CNGA4Q8IV77 575 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 SLC4A11Q8NBS3 891 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 B3GALNT2Q8NCR0 500 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 LNX1Q8TBB1 728 aaPredicted RBP13.12□□□□□ -0.31
TRAIP-209ENST00000488860 WHAMMQ8TF30 809 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 TNIP3Q96KP6 325 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 HEXIM2Q96MH2 286 aaKnown RBP13.12□□□□□ -0.31
TRAIP-209ENST00000488860 LPIN3Q9BQK8 851 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 EDEM3Q9BZQ6 932 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 ZNF576Q9H609 170 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 CHST7Q9NS84 486 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 FAM49BQ9NUQ9 324 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 MTRRQ9UBK8 725 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 CDH9Q9ULB4 789 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 SSX2IPQ9Y2D8 614 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 CDY1Q9Y6F8 540 aa13.12□□□□□ -0.31
TRAIP-209ENST00000488860 THAP12O43422 761 aa13.11□□□□□ -0.31
TRAIP-209ENST00000488860 OAZ2O95190 189 aa13.11□□□□□ -0.31
TRAIP-209ENST00000488860 FAM163BP0C2L3 166 aa13.11□□□□□ -0.31
TRAIP-209ENST00000488860 CCDC130P13994 396 aa13.11□□□□□ -0.31
TRAIP-209ENST00000488860 BRD2P25440 801 aaKnown RBP13.11□□□□□ -0.31
TRAIP-209ENST00000488860 SSTR3P32745 418 aaPredicted RBP13.11□□□□□ -0.31
TRAIP-209ENST00000488860 IRS1P35568 1242 aa13.11□□□□□ -0.31
TRAIP-209ENST00000488860 PDE6CP51160 858 aa13.11□□□□□ -0.31
TRAIP-209ENST00000488860 ZNF132P52740 706 aa13.11□□□□□ -0.31
TRAIP-209ENST00000488860 CYP27A1Q02318 531 aa13.11□□□□□ -0.31
TRAIP-209ENST00000488860 CREMQ03060 361 aa13.11□□□□□ -0.31
TRAIP-209ENST00000488860 MRPL58Q14197 206 aaKnown RBP13.11□□□□□ -0.31
TRAIP-209ENST00000488860 SLC39A12Q504Y0 691 aa13.11□□□□□ -0.31
TRAIP-209ENST00000488860 TDRD12Q587J7 1177 aaKnown RBP13.11□□□□□ -0.31
TRAIP-209ENST00000488860 KIAA0319Q5VV43 1072 aa13.11□□□□□ -0.31
TRAIP-209ENST00000488860 E4F1Q66K89 784 aaPredicted RBP13.11□□□□□ -0.31
TRAIP-209ENST00000488860 RSPO2Q6UXX9 243 aaPredicted RBP13.11□□□□□ -0.31
TRAIP-209ENST00000488860 FAM71AQ8IYT1 594 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms