RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 TUBB4BP68371 445 aa20.69■□□□□ 0.9
CCM2-216ENST00000488727 ZNF699Q32M78 642 aa20.69■□□□□ 0.9
CCM2-216ENST00000488727 USP41Q3LFD5 358 aa20.69■□□□□ 0.9
CCM2-216ENST00000488727 SPOPLQ6IQ16 392 aa20.69■□□□□ 0.9
CCM2-216ENST00000488727 DSTYKQ6XUX3 929 aa20.69■□□□□ 0.9
CCM2-216ENST00000488727 CEP57Q86XR8 500 aa20.69■□□□□ 0.9
CCM2-216ENST00000488727 TCF25Q9BQ70 676 aa20.69■□□□□ 0.9
CCM2-216ENST00000488727 VRTNQ9H8Y1 702 aa20.69■□□□□ 0.9
CCM2-216ENST00000488727 RAB20Q9NX57 234 aa20.69■□□□□ 0.9
CCM2-216ENST00000488727 GDAP2Q9NXN4 497 aa20.69■□□□□ 0.9
CCM2-216ENST00000488727 TIMM13Q9Y5L4 95 aaPredicted RBP20.69■□□□□ 0.9
CCM2-216ENST00000488727 SNX9Q9Y5X1 595 aa20.69■□□□□ 0.9
CCM2-216ENST00000488727 FSCN2O14926 492 aa20.68■□□□□ 0.9
CCM2-216ENST00000488727 N4BP1O75113 896 aaKnown RBP20.68■□□□□ 0.9
CCM2-216ENST00000488727 IPO7O95373 1038 aaKnown RBP20.68■□□□□ 0.9
CCM2-216ENST00000488727 CTSAP10619 480 aa20.68■□□□□ 0.9
CCM2-216ENST00000488727 PAX3P23760 479 aa20.68■□□□□ 0.9
CCM2-216ENST00000488727 ADGRE1Q14246 886 aa20.68■□□□□ 0.9
CCM2-216ENST00000488727 WHAMMP3Q1A5X7 153 aa20.68■□□□□ 0.9
CCM2-216ENST00000488727 SGSM1Q2NKQ1 1148 aa20.68■□□□□ 0.9
CCM2-216ENST00000488727 WDR72Q3MJ13 1102 aa20.68■□□□□ 0.9
CCM2-216ENST00000488727 BAP1Q92560 729 aa20.68■□□□□ 0.9
CCM2-216ENST00000488727 TTPALQ9BTX7 342 aa20.68■□□□□ 0.9
CCM2-216ENST00000488727 LMAN2LQ9H0V9 348 aa20.68■□□□□ 0.9
CCM2-216ENST00000488727 APOBEC3GQ9HC16 384 aaKnown RBP20.68■□□□□ 0.9
CCM2-216ENST00000488727 STK39Q9UEW8 545 aa20.68■□□□□ 0.9
CCM2-216ENST00000488727 PCDHB8Q9UN66 801 aa20.68■□□□□ 0.9
CCM2-216ENST00000488727 CYB561D2O14569 222 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 EPHB6O15197 1021 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 P4HA2O15460 535 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 KRT86O43790 486 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 LCA5LO95447 670 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 GLUD2P49448 558 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 AMPD2Q01433 879 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 DSG1Q02413 1049 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 KIAA0319Q5VV43 1072 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 TMC7Q7Z402 723 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 DEFB123Q8N688 67 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 NEK11Q8NG66 645 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 LMO3Q8TAP4 145 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 JAKMIP2Q96AA8 810 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 ENTPD7Q9NQZ7 604 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 FAM53CQ9NYF3 392 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 POLIQ9UNA4 740 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 REV3LO60673 3130 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 C2CD2LO14523 706 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 SYN3O14994 580 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 KCNMA1Q12791 1236 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 PLPP4Q5VZY2 271 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 PDXDC1Q6P996 788 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 PRSS55Q6UWB4 352 aaPredicted RBP20.67■□□□□ 0.9
CCM2-216ENST00000488727 KIAA1328Q86T90 577 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 RIN2Q8WYP3 895 aaPredicted RBP20.67■□□□□ 0.9
CCM2-216ENST00000488727 MRPL38Q96DV4 380 aaKnown RBP20.67■□□□□ 0.9
CCM2-216ENST00000488727 ARID3AQ99856 593 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 TSGA10Q9BZW7 698 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 NUCKS1Q9H1E3 243 aaKnown RBP20.67■□□□□ 0.9
CCM2-216ENST00000488727 FAM207AQ9NSI2 230 aaPredicted RBP20.67■□□□□ 0.9
CCM2-216ENST00000488727 L1RE1Q9UN81 338 aa20.67■□□□□ 0.9
CCM2-216ENST00000488727 HIDE1A8MVS5 230 aa20.66■□□□□ 0.9
CCM2-216ENST00000488727 LILRB3O75022 631 aa20.66■□□□□ 0.9
CCM2-216ENST00000488727 URODP06132 367 aa20.66■□□□□ 0.9
CCM2-216ENST00000488727 ODC1P11926 461 aa20.66■□□□□ 0.9
CCM2-216ENST00000488727 CLCN6P51797 869 aa20.66■□□□□ 0.9
CCM2-216ENST00000488727 VAV2P52735 878 aa20.66■□□□□ 0.9
CCM2-216ENST00000488727 NOP14P78316 857 aaKnown RBP20.66■□□□□ 0.9
CCM2-216ENST00000488727 SOWAHAQ2M3V2 549 aa20.66■□□□□ 0.9
CCM2-216ENST00000488727 ZNF667Q5HYK9 610 aa20.66■□□□□ 0.9
CCM2-216ENST00000488727 CCDC122Q5T0U0 273 aa20.66■□□□□ 0.9
CCM2-216ENST00000488727 WSCD1Q658N2 575 aa20.66■□□□□ 0.9
CCM2-216ENST00000488727 KIAA1841Q6NSI8 718 aa20.66■□□□□ 0.9
CCM2-216ENST00000488727 LIMS2Q7Z4I7 341 aa20.66■□□□□ 0.9
CCM2-216ENST00000488727 MICAL1Q8TDZ2 1067 aa20.66■□□□□ 0.9
CCM2-216ENST00000488727 TAF4BQ92750 862 aa20.66■□□□□ 0.9
CCM2-216ENST00000488727 GUCD1Q96NT3 240 aa20.66■□□□□ 0.9
CCM2-216ENST00000488727 CEP72Q9P209 647 aa20.66■□□□□ 0.9
CCM2-216ENST00000488727 NXF1Q9UBU9 619 aaKnown RBP20.66■□□□□ 0.9
CCM2-216ENST00000488727 GUCA1BQ9UMX6 200 aa20.66■□□□□ 0.9
CCM2-216ENST00000488727 PRRC2BQ5JSZ5 2229 aaKnown RBP20.66■□□□□ 0.9
CCM2-216ENST00000488727 CLSTN1O94985 981 aa20.65■□□□□ 0.9
CCM2-216ENST00000488727 CYP11A1P05108 521 aa20.65■□□□□ 0.9
CCM2-216ENST00000488727 TYMPP19971 482 aa20.65■□□□□ 0.9
CCM2-216ENST00000488727 VARS2Q5ST30 1063 aaKnown RBP20.65■□□□□ 0.9
CCM2-216ENST00000488727 LNX1Q8TBB1 728 aaPredicted RBP20.65■□□□□ 0.9
CCM2-216ENST00000488727 PIK3R5Q8WYR1 880 aa20.65■□□□□ 0.9
CCM2-216ENST00000488727 SYN2Q92777 582 aaPredicted RBP20.65■□□□□ 0.9
CCM2-216ENST00000488727 CCDC42Q96M95 316 aa20.65■□□□□ 0.9
CCM2-216ENST00000488727 CRACR2AQ9BSW2 395 aa20.65■□□□□ 0.9
CCM2-216ENST00000488727 IMPG2Q9BZV3 1241 aa20.65■□□□□ 0.9
CCM2-216ENST00000488727 MRPL17Q9NRX2 175 aaKnown RBP20.65■□□□□ 0.9
CCM2-216ENST00000488727 ZNF446Q9NWS9 450 aa20.65■□□□□ 0.9
CCM2-216ENST00000488727 ARHGAP20Q9P2F6 1191 aa20.65■□□□□ 0.9
CCM2-216ENST00000488727 TRIM10Q9UDY6 481 aa20.65■□□□□ 0.9
CCM2-216ENST00000488727 IRAK3Q9Y616 596 aa20.65■□□□□ 0.9
CCM2-216ENST00000488727 HUS1O60921 280 aa20.64■□□□□ 0.9
CCM2-216ENST00000488727 CXCL14O95715 111 aa20.64■□□□□ 0.9
CCM2-216ENST00000488727 ASPAP45381 313 aa20.64■□□□□ 0.9
CCM2-216ENST00000488727 MRPL58Q14197 206 aaKnown RBP20.64■□□□□ 0.9
CCM2-216ENST00000488727 SMC1AQ14683 1233 aaKnown RBP20.64■□□□□ 0.9
CCM2-216ENST00000488727 TEX35Q5T0J7 233 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms