RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 TAOK1Q7L7X3 1001 aa13.4□□□□□ -0.27
CLIC4-202ENST00000488683 RHPN2Q8IUC4 686 aa13.4□□□□□ -0.27
CLIC4-202ENST00000488683 GRK7Q8WTQ7 553 aa13.4□□□□□ -0.27
CLIC4-202ENST00000488683 SLITRK1Q96PX8 696 aa13.4□□□□□ -0.27
CLIC4-202ENST00000488683 EVPLQ92817 2033 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 SGK1O00141 431 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 LIASO43766 372 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 FAM189A1O60320 539 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 IL1R2P27930 398 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 STX2P32856 288 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 RFC1P35251 1148 aaPredicted RBP13.39□□□□□ -0.27
CLIC4-202ENST00000488683 ELF3P78545 371 aaPredicted RBP13.39□□□□□ -0.27
CLIC4-202ENST00000488683 STXBP2Q15833 593 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 MSS51Q4VC12 460 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 WDR78Q5VTH9 848 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 SYDE1Q6ZW31 735 aaPredicted RBP13.39□□□□□ -0.27
CLIC4-202ENST00000488683 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.39□□□□□ -0.27
CLIC4-202ENST00000488683 CROCCP2Q86T23 111 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 FITM2Q8N6M3 262 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 UBR7Q8N806 425 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 MAIP1Q8WWC4 291 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 RGS17Q9UGC6 210 aaPredicted RBP13.39□□□□□ -0.27
CLIC4-202ENST00000488683 SSC5DA1L4H1 1573 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 WDR90Q96KV7 1748 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 GRAP2O75791 330 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 RPSAP08865 295 aaKnown RBP13.39□□□□□ -0.27
CLIC4-202ENST00000488683 MMP8P22894 467 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 SSTR1P30872 391 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 MAN1A1P33908 653 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 ZNF132P52740 706 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 WDR4P57081 412 aaKnown RBP13.39□□□□□ -0.27
CLIC4-202ENST00000488683 RNASELQ05823 741 aaKnown RBP13.39□□□□□ -0.27
CLIC4-202ENST00000488683 ACCSLQ4AC99 568 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 EEF1DP3Q658K8 133 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 ARFGAP1Q8N6T3 406 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 ANKS4BQ8N8V4 417 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 KLRG1Q96E93 195 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 STMN4Q9H169 189 aaPredicted RBP13.39□□□□□ -0.27
CLIC4-202ENST00000488683 ASCC2Q9H1I8 757 aaPredicted RBP13.39□□□□□ -0.27
CLIC4-202ENST00000488683 KDM4CQ9H3R0 1056 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 MINDY3Q9H8M7 445 aa13.39□□□□□ -0.27
CLIC4-202ENST00000488683 MRPL47Q9HD33 250 aaKnown RBP13.39□□□□□ -0.27
CLIC4-202ENST00000488683 MCM3APO60318 1980 aa13.38□□□□□ -0.27
CLIC4-202ENST00000488683 EXOC1LA0A1B0GW35 172 aa13.38□□□□□ -0.27
CLIC4-202ENST00000488683 SOWAHBA6NEL2 793 aa13.38□□□□□ -0.27
CLIC4-202ENST00000488683 EIF4E1BA6NMX2 242 aaKnown RBP13.38□□□□□ -0.27
CLIC4-202ENST00000488683 FGFR1P11362 822 aa13.38□□□□□ -0.27
CLIC4-202ENST00000488683 CDC25CP30307 473 aa13.38□□□□□ -0.27
CLIC4-202ENST00000488683 GCLCP48506 637 aaPredicted RBP13.38□□□□□ -0.27
CLIC4-202ENST00000488683 SLFN12LQ6IEE8 588 aa13.38□□□□□ -0.27
CLIC4-202ENST00000488683 DNAJC24Q6P3W2 148 aa13.38□□□□□ -0.27
CLIC4-202ENST00000488683 NPNTQ6UXI9 565 aa13.38□□□□□ -0.27
CLIC4-202ENST00000488683 TRIM72Q6ZMU5 477 aa13.38□□□□□ -0.27
CLIC4-202ENST00000488683 ANKLE1Q8NAG6 615 aa13.38□□□□□ -0.27
CLIC4-202ENST00000488683 EXD1Q8NHP7 514 aa13.38□□□□□ -0.27
CLIC4-202ENST00000488683 TWNKQ96RR1 684 aa13.38□□□□□ -0.27
CLIC4-202ENST00000488683 IGKV6D-21A0A0A0MT36 114 aa13.38□□□□□ -0.27
CLIC4-202ENST00000488683 TCRBV5S1A1TA0A578 114 aa13.38□□□□□ -0.27
CLIC4-202ENST00000488683 TMEM191CA6NGB0 347 aa13.38□□□□□ -0.27
CLIC4-202ENST00000488683 STAM2O75886 525 aa13.38□□□□□ -0.27
CLIC4-202ENST00000488683 FARP2O94887 1054 aaPredicted RBP13.38□□□□□ -0.27
CLIC4-202ENST00000488683 IQCF3P0C7M6 154 aa13.38□□□□□ -0.27
CLIC4-202ENST00000488683 TMEM191BP0C7N4 346 aa13.38□□□□□ -0.27
CLIC4-202ENST00000488683 STAT5BP51692 787 aa13.38□□□□□ -0.27
CLIC4-202ENST00000488683 CLCN3P51790 818 aa13.38□□□□□ -0.27
CLIC4-202ENST00000488683 C1QBPQ07021 282 aaKnown RBP13.38□□□□□ -0.27
CLIC4-202ENST00000488683 TARBP2Q15633 366 aaKnown RBP13.38□□□□□ -0.27
CLIC4-202ENST00000488683 SMAD1Q15797 465 aaKnown RBP13.38□□□□□ -0.27
CLIC4-202ENST00000488683 VCPIP1Q96JH7 1222 aa13.38□□□□□ -0.27
CLIC4-202ENST00000488683 NIFKQ9BYG3 293 aaKnown RBP13.38□□□□□ -0.27
CLIC4-202ENST00000488683 ECT2Q9H8V3 914 aa13.38□□□□□ -0.27
CLIC4-202ENST00000488683 C19orf81C9J6K1 198 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 ADCY3O60266 1144 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 ASS1P00966 412 aaKnown RBP13.37□□□□□ -0.27
CLIC4-202ENST00000488683 CXCL8P10145 99 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 TBXAS1P24557 533 aaPredicted RBP13.37□□□□□ -0.27
CLIC4-202ENST00000488683 ICAM3P32942 547 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 RPA3P35244 121 aaPredicted RBP13.37□□□□□ -0.27
CLIC4-202ENST00000488683 ALDH5A1P51649 535 aaPredicted RBP13.37□□□□□ -0.27
CLIC4-202ENST00000488683 PDIA2Q13087 525 aaKnown RBP13.37□□□□□ -0.27
CLIC4-202ENST00000488683 MMRN1Q13201 1228 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 SPOCD1Q6ZMY3 1216 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 HSPH1Q92598 858 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 CXCL16Q9H2A7 254 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 HOMER3Q9NSC5 361 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 PARVAQ9NVD7 372 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 SCINQ9Y6U3 715 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 INO80B-WBP1J3KQ70 363 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 MSCO60682 206 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 LDHAP00338 332 aaKnown RBP13.37□□□□□ -0.27
CLIC4-202ENST00000488683 OAS1P00973 400 aaKnown RBP13.37□□□□□ -0.27
CLIC4-202ENST00000488683 KRT15P19012 456 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 ITIH4Q14624 930 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 SNCBQ16143 134 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 PTPN20Q4JDL3 420 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 FNBP1LQ5T0N5 605 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 GADL1Q6ZQY3 521 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 CCDC89Q8N998 374 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 CCDC63Q8NA47 563 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 KCNN1Q92952 543 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms