RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 PRRX2Q99811 253 aa19.07■□□□□ 0.64
ITGB1-215ENST00000488494 LPIN3Q9BQK8 851 aa19.07■□□□□ 0.64
ITGB1-215ENST00000488494 SLITRK6Q9H5Y7 841 aa19.07■□□□□ 0.64
ITGB1-215ENST00000488494 TBC1D17Q9HA65 648 aa19.07■□□□□ 0.64
ITGB1-215ENST00000488494 DDX43Q9NXZ2 648 aaKnown RBP19.07■□□□□ 0.64
ITGB1-215ENST00000488494 COL4A3Q01955 1670 aa19.06■□□□□ 0.64
ITGB1-215ENST00000488494 A0A1W2PRU2 124 aa19.06■□□□□ 0.64
ITGB1-215ENST00000488494 PRPF40AO75400 957 aaKnown RBP19.06■□□□□ 0.64
ITGB1-215ENST00000488494 TNNI1P19237 187 aa19.06■□□□□ 0.64
ITGB1-215ENST00000488494 CLCN5P51795 746 aa19.06■□□□□ 0.64
ITGB1-215ENST00000488494 PTPN5P54829 565 aa19.06■□□□□ 0.64
ITGB1-215ENST00000488494 VEPH1Q14D04 833 aa19.06■□□□□ 0.64
ITGB1-215ENST00000488494 TEAD2Q15562 447 aa19.06■□□□□ 0.64
ITGB1-215ENST00000488494 TRAPPC11Q7Z392 1133 aa19.06■□□□□ 0.64
ITGB1-215ENST00000488494 TOP6BLQ8N6T0 577 aa19.06■□□□□ 0.64
ITGB1-215ENST00000488494 FAM200AQ8TCP9 573 aa19.06■□□□□ 0.64
ITGB1-215ENST00000488494 SPPL2BQ8TCT7 592 aa19.06■□□□□ 0.64
ITGB1-215ENST00000488494 PSMG2Q969U7 264 aa19.06■□□□□ 0.64
ITGB1-215ENST00000488494 ZSWIM3Q96MP5 696 aa19.06■□□□□ 0.64
ITGB1-215ENST00000488494 ASB16Q96NS5 453 aa19.06■□□□□ 0.64
ITGB1-215ENST00000488494 LRRC3Q9BY71 257 aa19.06■□□□□ 0.64
ITGB1-215ENST00000488494 GZF1Q9H116 711 aaPredicted RBP19.06■□□□□ 0.64
ITGB1-215ENST00000488494 ZNF334Q9HCZ1 680 aaPredicted RBP19.06■□□□□ 0.64
ITGB1-215ENST00000488494 TMLHEQ9NVH6 421 aa19.06■□□□□ 0.64
ITGB1-215ENST00000488494 ASB3Q9Y575 518 aa19.06■□□□□ 0.64
ITGB1-215ENST00000488494 STK25O00506 426 aa19.05■□□□□ 0.64
ITGB1-215ENST00000488494 HCRTO43612 131 aa19.05■□□□□ 0.64
ITGB1-215ENST00000488494 HAPLN1P10915 354 aaPredicted RBP19.05■□□□□ 0.64
ITGB1-215ENST00000488494 AOC1P19801 751 aa19.05■□□□□ 0.64
ITGB1-215ENST00000488494 TUFMP49411 452 aaKnown RBP19.05■□□□□ 0.64
ITGB1-215ENST00000488494 NUCB2P80303 420 aa19.05■□□□□ 0.64
ITGB1-215ENST00000488494 MYL7Q01449 175 aa19.05■□□□□ 0.64
ITGB1-215ENST00000488494 SMARCB1Q12824 385 aa19.05■□□□□ 0.64
ITGB1-215ENST00000488494 TCF15Q12870 199 aa19.05■□□□□ 0.64
ITGB1-215ENST00000488494 DPYDQ12882 1025 aa19.05■□□□□ 0.64
ITGB1-215ENST00000488494 CCDC142Q17RM4 750 aa19.05■□□□□ 0.64
ITGB1-215ENST00000488494 SOWAHAQ2M3V2 549 aa19.05■□□□□ 0.64
ITGB1-215ENST00000488494 INTS6LQ5JSJ4 861 aaKnown RBP19.05■□□□□ 0.64
ITGB1-215ENST00000488494 TANGO2Q6ICL3 276 aa19.05■□□□□ 0.64
ITGB1-215ENST00000488494 ITIH5Q86UX2 942 aa19.05■□□□□ 0.64
ITGB1-215ENST00000488494 OSTM1Q86WC4 334 aa19.05■□□□□ 0.64
ITGB1-215ENST00000488494 ZSCAN18Q8TBC5 510 aaPredicted RBP19.05■□□□□ 0.64
ITGB1-215ENST00000488494 SMARCD2Q92925 531 aa19.05■□□□□ 0.64
ITGB1-215ENST00000488494 CCDC47Q96A33 483 aaKnown RBP19.05■□□□□ 0.64
ITGB1-215ENST00000488494 ELSPBP1Q96BH3 223 aa19.05■□□□□ 0.64
ITGB1-215ENST00000488494 PLA2G2FQ9BZM2 168 aa19.05■□□□□ 0.64
ITGB1-215ENST00000488494 KCTD10Q9H3F6 313 aa19.05■□□□□ 0.64
ITGB1-215ENST00000488494 PCDHB5Q9Y5E4 795 aa19.05■□□□□ 0.64
ITGB1-215ENST00000488494 GALR2O43603 387 aaPredicted RBP19.04■□□□□ 0.64
ITGB1-215ENST00000488494 PI15O43692 258 aa19.04■□□□□ 0.64
ITGB1-215ENST00000488494 ZNF202O95125 648 aa19.04■□□□□ 0.64
ITGB1-215ENST00000488494 NR3C1P04150 777 aa19.04■□□□□ 0.64
ITGB1-215ENST00000488494 CASP4P49662 377 aa19.04■□□□□ 0.64
ITGB1-215ENST00000488494 GRM2Q14416 872 aa19.04■□□□□ 0.64
ITGB1-215ENST00000488494 STXBP5Q5T5C0 1151 aa19.04■□□□□ 0.64
ITGB1-215ENST00000488494 DNAJB7Q7Z6W7 309 aaPredicted RBP19.04■□□□□ 0.64
ITGB1-215ENST00000488494 SPATA18Q8TC71 538 aa19.04■□□□□ 0.64
ITGB1-215ENST00000488494 PLEKHO2Q8TD55 490 aa19.04■□□□□ 0.64
ITGB1-215ENST00000488494 GIPC2Q8TF65 315 aa19.04■□□□□ 0.64
ITGB1-215ENST00000488494 KBTBD7Q8WVZ9 684 aa19.04■□□□□ 0.64
ITGB1-215ENST00000488494 ACBD6Q9BR61 282 aa19.04■□□□□ 0.64
ITGB1-215ENST00000488494 PI4K2AQ9BTU6 479 aa19.04■□□□□ 0.64
ITGB1-215ENST00000488494 GABRDO14764 452 aa19.03■□□□□ 0.64
ITGB1-215ENST00000488494 RHOBTB3O94955 611 aa19.03■□□□□ 0.64
ITGB1-215ENST00000488494 PCSK1P29120 753 aa19.03■□□□□ 0.64
ITGB1-215ENST00000488494 LHX1P48742 406 aa19.03■□□□□ 0.64
ITGB1-215ENST00000488494 NUBP1P53384 320 aa19.03■□□□□ 0.64
ITGB1-215ENST00000488494 NFE2Q16621 373 aaPredicted RBP19.03■□□□□ 0.64
ITGB1-215ENST00000488494 GAREM2Q75VX8 874 aa19.03■□□□□ 0.64
ITGB1-215ENST00000488494 SLC9A9Q8IVB4 645 aa19.03■□□□□ 0.64
ITGB1-215ENST00000488494 STKLD1Q8NE28 680 aa19.03■□□□□ 0.64
ITGB1-215ENST00000488494 PKMYT1Q99640 499 aa19.03■□□□□ 0.64
ITGB1-215ENST00000488494 ZFP14Q9HCL3 533 aa19.03■□□□□ 0.64
ITGB1-215ENST00000488494 DMAC2Q9NW81 257 aa19.03■□□□□ 0.64
ITGB1-215ENST00000488494 NCANO14594 1321 aa19.02■□□□□ 0.64
ITGB1-215ENST00000488494 PDXKO00764 312 aa19.02■□□□□ 0.64
ITGB1-215ENST00000488494 FGF19O95750 216 aa19.02■□□□□ 0.64
ITGB1-215ENST00000488494 GABRR2P28476 465 aa19.02■□□□□ 0.64
ITGB1-215ENST00000488494 VIPR2P41587 438 aa19.02■□□□□ 0.64
ITGB1-215ENST00000488494 GPR15P49685 360 aa19.02■□□□□ 0.64
ITGB1-215ENST00000488494 PSMC1P62191 440 aaKnown RBP19.02■□□□□ 0.64
ITGB1-215ENST00000488494 PFKPQ01813 784 aa19.02■□□□□ 0.64
ITGB1-215ENST00000488494 BIRC3Q13489 604 aa19.02■□□□□ 0.64
ITGB1-215ENST00000488494 SNW1Q13573 536 aaKnown RBP19.02■□□□□ 0.64
ITGB1-215ENST00000488494 MLF2Q15773 248 aaPredicted RBP19.02■□□□□ 0.64
ITGB1-215ENST00000488494 TAF12Q16514 161 aa19.02■□□□□ 0.64
ITGB1-215ENST00000488494 LIMS2Q7Z4I7 341 aa19.02■□□□□ 0.64
ITGB1-215ENST00000488494 ZNF516Q92618 1163 aa19.02■□□□□ 0.64
ITGB1-215ENST00000488494 GCNAQ96QF7 691 aa19.02■□□□□ 0.64
ITGB1-215ENST00000488494 MMS19Q96T76 1030 aa19.02■□□□□ 0.64
ITGB1-215ENST00000488494 SYT15Q9BQS2 421 aa19.02■□□□□ 0.64
ITGB1-215ENST00000488494 FOXQ1Q9C009 403 aa19.02■□□□□ 0.64
ITGB1-215ENST00000488494 ATXN3LQ9H3M9 355 aa19.02■□□□□ 0.64
ITGB1-215ENST00000488494 ABCB6Q9NP58 842 aa19.02■□□□□ 0.64
ITGB1-215ENST00000488494 GTF3C4Q9UKN8 822 aa19.02■□□□□ 0.64
ITGB1-215ENST00000488494 MAPK8IP1Q9UQF2 711 aa19.02■□□□□ 0.64
ITGB1-215ENST00000488494 COL4A2P08572 1712 aa19.01■□□□□ 0.63
ITGB1-215ENST00000488494 LRRIQ3A6PVS8 624 aaPredicted RBP19.01■□□□□ 0.63
ITGB1-215ENST00000488494 PHACTR2O75167 634 aa19.01■□□□□ 0.63
ITGB1-215ENST00000488494 CLSTN1O94985 981 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms