RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 PPP4R4Q6NUP7 873 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 DRICH1Q6PGQ1 229 aaPredicted RBP3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 DARS2Q6PI48 645 aaKnown RBP3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 C9orf106Q8NAJ2 232 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 PCSK9Q8NBP7 692 aaKnown RBP3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 TBC1D15Q8TC07 691 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 BRIX1Q8TDN6 353 aaKnown RBP3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 MAML1Q92585 1016 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 TTC17Q96AE7 1141 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 ZSWIM1Q9BR11 485 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 SLC29A3Q9BZD2 475 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 SIDT1Q9NXL6 827 aaKnown RBP3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 FAM30AQ9NZY2 134 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 JKAMPQ9P055 326 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 FNIP2Q9P278 1114 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 CPNE7Q9UBL6 633 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 AATKQ6ZMQ8 1374 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 F8W8V4 182 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 PHGDHO43175 533 aaKnown RBP3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 PQBP1O60828 265 aaKnown RBP3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 DNAJB5O75953 348 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 NCR1O76036 304 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 ZFPL1O95159 310 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 MYF5P13349 255 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 SLC7A1P30825 629 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 PIK3CBP42338 1070 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 PTH2RP49190 550 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 ARFIP2P53365 341 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 RNASE9P60153 205 aaKnown RBP3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 MXRA7P84157 204 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 FOXI1Q12951 378 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 MPP3Q13368 585 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 UBE4AQ14139 1066 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 KIF22Q14807 665 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 BEAN1Q3B7T3 259 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 EMC10Q5UCC4 262 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 AGAP9Q5VTM2 703 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 SESTD1Q86VW0 696 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 PDPRQ8NCN5 879 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 SLC17A8Q8NDX2 589 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 NSUN7Q8NE18 718 aaKnown RBP3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 MTFMTQ96DP5 389 aaKnown RBP3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 MARS2Q96GW9 593 aaKnown RBP3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 LRIG1Q96JA1 1093 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 DUSP26Q9BV47 211 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 TRIM54Q9BYV2 358 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 BRD9Q9H8M2 597 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 SARS2Q9NP81 518 aaKnown RBP3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 HSFX1Q9UBD0 423 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 USP25Q9UHP3 1055 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 CHST2Q9Y4C5 530 aa3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 USP15Q9Y4E8 981 aaPredicted RBP3.59□□□□□ -1.83
R3HDM1-219ENST00000488035 ANO9A1A5B4 782 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 DNAJC9-AS1A6NH13 148 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 TMEM233B4DJY2 109 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 PEX14O75381 377 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 IGLV2-14P01704 120 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 ELANEP08246 267 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 GNAI3P08754 354 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 RARBP10826 455 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 ALAS1P13196 640 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 GCSHP23434 173 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 SERPINB3P29508 390 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 ABCG1P45844 678 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 ZNF135P52742 658 aaPredicted RBP3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 CACNB3P54284 484 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 SUMO3P55854 103 aaPredicted RBP3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 RHBDL3P58872 404 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 GNAI1P63096 354 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 FMO1Q01740 532 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 BOP1Q14137 746 aaKnown RBP3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 POLD3Q15054 466 aaPredicted RBP3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 ATP2B3Q16720 1220 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 PDCD4Q53EL6 469 aaKnown RBP3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 C3orf38Q5JPI3 329 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 KRT78Q8N1N4 520 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 FITM2Q8N6M3 262 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 ZNF366Q8N895 744 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 NLGN4YQ8NFZ3 816 aaPredicted RBP3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 SVIPQ8NHG7 77 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 APIPQ96GX9 242 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 TBCBQ99426 244 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 IMPG2Q9BZV3 1241 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 TINAGL1Q9GZM7 467 aaPredicted RBP3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 SMURF2Q9HAU4 748 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 GPR35Q9HC97 309 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 KLHL11Q9NVR0 708 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 DKK2Q9UBU2 259 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 ZDHHC8Q9ULC8 765 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 TPCN1Q9ULQ1 816 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 PHTF1Q9UMS5 762 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 CORO2BQ9UQ03 480 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 CDYLQ9Y232 598 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 MED16Q9Y2X0 877 aa3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.58□□□□□ -1.84
R3HDM1-219ENST00000488035 M0QYG6 137 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms