RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 ARNT2Q9HBZ2 717 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 SLAMF7Q9NQ25 335 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 CASS4Q9NQ75 786 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 ASB6Q9NWX5 421 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 ZDHHC8Q9ULC8 765 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 TPCN1Q9ULQ1 816 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 POLR2AP24928 1970 aaKnown RBP4.65□□□□□ -1.66
HMGB1P36-201ENST00000487709 LRRC14BA6NHZ5 514 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 DRGXA6NNA5 263 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 CHEK2O96017 543 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 MYBP10242 640 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 ZNF280AP59817 542 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 PIGFQ07326 219 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 PLS1Q14651 629 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 LLGL1Q15334 1064 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 CNN3Q15417 329 aaKnown RBP4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 CCDC93Q567U6 631 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 RNF220Q5VTB9 566 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 TSHZ3Q63HK5 1081 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 ZNF365Q70YC5 407 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 C1QL2Q7Z5L3 287 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 FAM43AQ8N2R8 423 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 TMEM132CQ8N3T6 1108 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 FAM156AQ8NDB6 213 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 IL17RDQ8NFM7 739 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 SLC35B2Q8TB61 432 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 TNPO1Q92973 898 aaKnown RBP4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 TIFAQ96CG3 184 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 IL17RBQ9NRM6 502 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 TBCCD1Q9NVR7 557 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 JKAMPQ9P055 326 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 FOXJ2Q9P0K8 574 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 DDX20Q9UHI6 824 aaKnown RBP4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 USP25Q9UHP3 1055 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 CPA4Q9UI42 421 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 ATRNL1Q5VV63 1379 aa4.65□□□□□ -1.67
HMGB1P36-201ENST00000487709 TCRBV7S2A1N4TA0A589 114 aa4.64□□□□□ -1.67
HMGB1P36-201ENST00000487709 ANO9A1A5B4 782 aa4.64□□□□□ -1.67
HMGB1P36-201ENST00000487709 CGB1A6NKQ9 187 aa4.64□□□□□ -1.67
HMGB1P36-201ENST00000487709 MYO1CO00159 1063 aa4.64□□□□□ -1.67
HMGB1P36-201ENST00000487709 FRS3O43559 492 aa4.64□□□□□ -1.67
HMGB1P36-201ENST00000487709 IFIT2P09913 472 aaKnown RBP4.64□□□□□ -1.67
HMGB1P36-201ENST00000487709 PEX2P28328 305 aa4.64□□□□□ -1.67
HMGB1P36-201ENST00000487709 IFIT5Q13325 482 aaKnown RBP4.64□□□□□ -1.67
HMGB1P36-201ENST00000487709 SNAPC2Q13487 334 aa4.64□□□□□ -1.67
HMGB1P36-201ENST00000487709 B3GNTL1Q67FW5 361 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P36-201ENST00000487709 FOXR2Q6PJQ5 311 aa4.64□□□□□ -1.67
HMGB1P36-201ENST00000487709 UBE3BQ7Z3V4 1068 aa4.64□□□□□ -1.67
HMGB1P36-201ENST00000487709 PDSS2Q86YH6 399 aa4.64□□□□□ -1.67
HMGB1P36-201ENST00000487709 RHOT2Q8IXI1 618 aa4.64□□□□□ -1.67
HMGB1P36-201ENST00000487709 KIAA0319LQ8IZA0 1049 aa4.64□□□□□ -1.67
HMGB1P36-201ENST00000487709 PJA1Q8NG27 643 aa4.64□□□□□ -1.67
HMGB1P36-201ENST00000487709 TNIP3Q96KP6 325 aa4.64□□□□□ -1.67
HMGB1P36-201ENST00000487709 C1QTNF7Q9BXJ2 289 aa4.64□□□□□ -1.67
HMGB1P36-201ENST00000487709 KLHL11Q9NVR0 708 aa4.64□□□□□ -1.67
HMGB1P36-201ENST00000487709 FAM30AQ9NZY2 134 aa4.64□□□□□ -1.67
HMGB1P36-201ENST00000487709 OGDHLQ9ULD0 1010 aa4.64□□□□□ -1.67
HMGB1P36-201ENST00000487709 L1RE1Q9UN81 338 aa4.64□□□□□ -1.67
HMGB1P36-201ENST00000487709 FAM50BQ9Y247 325 aa4.64□□□□□ -1.67
HMGB1P36-201ENST00000487709 WDR91A4D1P6 747 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 CDHR4A6H8M9 788 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 ISM1B1AKI9 464 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 F2RL2O00254 374 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 PQBP1O60828 265 aaKnown RBP4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 SLC43A1O75387 559 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 GJB1P08034 283 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 RARBP10826 455 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 PRDX5P30044 214 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 SLC7A1P30825 629 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 PROK1P58294 105 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 NKX6-1P78426 367 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 OCA2Q04671 838 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 MAPK7Q13164 816 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 UBXN2BQ14CS0 331 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 AKNAD1Q5T1N1 836 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 ZNF783Q6ZMS7 281 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 OR6B3Q8NGW1 331 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 TBC1D15Q8TC07 691 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 NUP133Q8WUM0 1156 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 MOGAT1Q96PD6 335 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 BTBD1Q9H0C5 482 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 MRPL46Q9H2W6 279 aaKnown RBP4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 RNPEPQ9H4A4 650 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 ZNF287Q9HBT7 754 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 DDX21Q9NR30 783 aaKnown RBP eCLIP4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 SLC17A6Q9P2U8 582 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 PCDHA1Q9Y5I3 950 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 SNX13Q9Y5W8 968 aa4.63□□□□□ -1.67
HMGB1P36-201ENST00000487709 NT5C1B-RDH14C9J2C7 533 aa4.62□□□□□ -1.67
HMGB1P36-201ENST00000487709 BRAFP15056 766 aa4.62□□□□□ -1.67
HMGB1P36-201ENST00000487709 NOMO3P69849 1222 aa4.62□□□□□ -1.67
HMGB1P36-201ENST00000487709 POU6F2P78424 691 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P36-201ENST00000487709 ZNF844Q08AG5 666 aa4.62□□□□□ -1.67
HMGB1P36-201ENST00000487709 AMOTQ4VCS5 1084 aa4.62□□□□□ -1.67
HMGB1P36-201ENST00000487709 EMC10Q5UCC4 262 aa4.62□□□□□ -1.67
HMGB1P36-201ENST00000487709 ZNF788Q6ZQV5 615 aa4.62□□□□□ -1.67
HMGB1P36-201ENST00000487709 MED25Q71SY5 747 aa4.62□□□□□ -1.67
HMGB1P36-201ENST00000487709 Q8N9P0 234 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P36-201ENST00000487709 ACRBPQ8NEB7 543 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms