RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 ACAT1P24752 427 aaKnown RBP21.94■■□□□ 1.1
HDAC4-209ENST00000487617 GPC5P78333 572 aa21.94■■□□□ 1.1
HDAC4-209ENST00000487617 SOWAHAQ2M3V2 549 aa21.94■■□□□ 1.1
HDAC4-209ENST00000487617 ASTLQ6HA08 431 aaPredicted RBP21.94■■□□□ 1.1
HDAC4-209ENST00000487617 DNAJB7Q7Z6W7 309 aaPredicted RBP21.94■■□□□ 1.1
HDAC4-209ENST00000487617 ITIH5Q86UX2 942 aa21.94■■□□□ 1.1
HDAC4-209ENST00000487617 OSTM1Q86WC4 334 aa21.94■■□□□ 1.1
HDAC4-209ENST00000487617 SLC9A9Q8IVB4 645 aa21.94■■□□□ 1.1
HDAC4-209ENST00000487617 SPATA18Q8TC71 538 aa21.94■■□□□ 1.1
HDAC4-209ENST00000487617 ACBD6Q9BR61 282 aa21.94■■□□□ 1.1
HDAC4-209ENST00000487617 LRRC3Q9BY71 257 aa21.94■■□□□ 1.1
HDAC4-209ENST00000487617 PCDHB5Q9Y5E4 795 aa21.94■■□□□ 1.1
HDAC4-209ENST00000487617 ZDBF2Q9HCK1 2354 aa21.94■■□□□ 1.1
HDAC4-209ENST00000487617 KRBA1A5PL33 1030 aa21.93■■□□□ 1.1
HDAC4-209ENST00000487617 ECI2O75521 394 aa21.93■■□□□ 1.1
HDAC4-209ENST00000487617 CST3P01034 146 aaPredicted RBP21.93■■□□□ 1.1
HDAC4-209ENST00000487617 NR3C1P04150 777 aa21.93■■□□□ 1.1
HDAC4-209ENST00000487617 HAPLN1P10915 354 aaPredicted RBP21.93■■□□□ 1.1
HDAC4-209ENST00000487617 LHX1P48742 406 aa21.93■■□□□ 1.1
HDAC4-209ENST00000487617 CASP4P49662 377 aa21.93■■□□□ 1.1
HDAC4-209ENST00000487617 VEPH1Q14D04 833 aa21.93■■□□□ 1.1
HDAC4-209ENST00000487617 TEAD2Q15562 447 aa21.93■■□□□ 1.1
HDAC4-209ENST00000487617 NFE2Q16621 373 aaPredicted RBP21.93■■□□□ 1.1
HDAC4-209ENST00000487617 FAM78AQ5JUQ0 283 aa21.93■■□□□ 1.1
HDAC4-209ENST00000487617 DPH6Q7L8W6 267 aa21.93■■□□□ 1.1
HDAC4-209ENST00000487617 TMC8Q8IU68 726 aa21.93■■□□□ 1.1
HDAC4-209ENST00000487617 ZNF516Q92618 1163 aa21.93■■□□□ 1.1
HDAC4-209ENST00000487617 PSMG2Q969U7 264 aa21.93■■□□□ 1.1
HDAC4-209ENST00000487617 LPIN3Q9BQK8 851 aa21.93■■□□□ 1.1
HDAC4-209ENST00000487617 GZF1Q9H116 711 aaPredicted RBP21.93■■□□□ 1.1
HDAC4-209ENST00000487617 TMLHEQ9NVH6 421 aa21.93■■□□□ 1.1
HDAC4-209ENST00000487617 ZNF318Q5VUA4 2279 aa21.92■■□□□ 1.1
HDAC4-209ENST00000487617 A0A1W2PRU2 124 aa21.92■■□□□ 1.1
HDAC4-209ENST00000487617 STK25O00506 426 aa21.92■■□□□ 1.1
HDAC4-209ENST00000487617 GABRDO14764 452 aa21.92■■□□□ 1.1
HDAC4-209ENST00000487617 CALUO43852 315 aaPredicted RBP21.92■■□□□ 1.1
HDAC4-209ENST00000487617 PHACTR2O75167 634 aa21.92■■□□□ 1.1
HDAC4-209ENST00000487617 NPR3P17342 541 aa21.92■■□□□ 1.1
HDAC4-209ENST00000487617 PCSK1P29120 753 aa21.92■■□□□ 1.1
HDAC4-209ENST00000487617 CLCN5P51795 746 aa21.92■■□□□ 1.1
HDAC4-209ENST00000487617 TRPC3Q13507 836 aa21.92■■□□□ 1.1
HDAC4-209ENST00000487617 KCNB1Q14721 858 aa21.92■■□□□ 1.1
HDAC4-209ENST00000487617 INTS6LQ5JSJ4 861 aaKnown RBP21.92■■□□□ 1.1
HDAC4-209ENST00000487617 CWF19L1Q69YN2 538 aaKnown RBP21.92■■□□□ 1.1
HDAC4-209ENST00000487617 TANGO2Q6ICL3 276 aa21.92■■□□□ 1.1
HDAC4-209ENST00000487617 FMR1NBQ8N0W7 255 aaPredicted RBP21.92■■□□□ 1.1
HDAC4-209ENST00000487617 TMEM105Q8N8V8 129 aa21.92■■□□□ 1.1
HDAC4-209ENST00000487617 SHKBP1Q8TBC3 707 aa21.92■■□□□ 1.1
HDAC4-209ENST00000487617 PLEKHO2Q8TD55 490 aa21.92■■□□□ 1.1
HDAC4-209ENST00000487617 TMEM174Q8WUU8 243 aa21.92■■□□□ 1.1
HDAC4-209ENST00000487617 ZSWIM3Q96MP5 696 aa21.92■■□□□ 1.1
HDAC4-209ENST00000487617 MMS19Q96T76 1030 aa21.92■■□□□ 1.1
HDAC4-209ENST00000487617 PRRX2Q99811 253 aa21.92■■□□□ 1.1
HDAC4-209ENST00000487617 PI4K2AQ9BTU6 479 aa21.92■■□□□ 1.1
HDAC4-209ENST00000487617 SLITRK6Q9H5Y7 841 aa21.92■■□□□ 1.1
HDAC4-209ENST00000487617 ZFP14Q9HCL3 533 aa21.92■■□□□ 1.1
HDAC4-209ENST00000487617 ZNF334Q9HCZ1 680 aaPredicted RBP21.92■■□□□ 1.1
HDAC4-209ENST00000487617 MAPK8IP1Q9UQF2 711 aa21.92■■□□□ 1.1
HDAC4-209ENST00000487617 HCRTO43612 131 aa21.91■■□□□ 1.1
HDAC4-209ENST00000487617 ATF6P18850 670 aa21.91■■□□□ 1.1
HDAC4-209ENST00000487617 RFX1P22670 979 aa21.91■■□□□ 1.1
HDAC4-209ENST00000487617 TAF12Q16514 161 aa21.91■■□□□ 1.1
HDAC4-209ENST00000487617 LIMS2Q7Z4I7 341 aa21.91■■□□□ 1.1
HDAC4-209ENST00000487617 PRSS33Q8NF86 280 aa21.91■■□□□ 1.1
HDAC4-209ENST00000487617 PARD3BQ8TEW8 1205 aa21.91■■□□□ 1.1
HDAC4-209ENST00000487617 GIPC2Q8TF65 315 aa21.91■■□□□ 1.1
HDAC4-209ENST00000487617 SMARCD2Q92925 531 aa21.91■■□□□ 1.1
HDAC4-209ENST00000487617 ELSPBP1Q96BH3 223 aa21.91■■□□□ 1.1
HDAC4-209ENST00000487617 ASB16Q96NS5 453 aa21.91■■□□□ 1.1
HDAC4-209ENST00000487617 PLA2G2FQ9BZM2 168 aa21.91■■□□□ 1.1
HDAC4-209ENST00000487617 ARHGEF3Q9NR81 526 aa21.91■■□□□ 1.1
HDAC4-209ENST00000487617 LRRIQ3A6PVS8 624 aaPredicted RBP21.9■■□□□ 1.1
HDAC4-209ENST00000487617 FGF19O95750 216 aa21.9■■□□□ 1.1
HDAC4-209ENST00000487617 FCARP24071 287 aa21.9■■□□□ 1.1
HDAC4-209ENST00000487617 BIRC3Q13489 604 aa21.9■■□□□ 1.1
HDAC4-209ENST00000487617 PNOCQ13519 176 aa21.9■■□□□ 1.1
HDAC4-209ENST00000487617 CEP135Q66GS9 1140 aa21.9■■□□□ 1.1
HDAC4-209ENST00000487617 KBTBD7Q8WVZ9 684 aa21.9■■□□□ 1.1
HDAC4-209ENST00000487617 PKMYT1Q99640 499 aa21.9■■□□□ 1.1
HDAC4-209ENST00000487617 GPR88Q9GZN0 384 aa21.9■■□□□ 1.1
HDAC4-209ENST00000487617 ATXN3LQ9H3M9 355 aa21.9■■□□□ 1.1
HDAC4-209ENST00000487617 GTF3C4Q9UKN8 822 aa21.9■■□□□ 1.1
HDAC4-209ENST00000487617 TRAF3IP3Q9Y228 551 aa21.9■■□□□ 1.1
HDAC4-209ENST00000487617 FRMD4BQ9Y2L6 1034 aa21.9■■□□□ 1.1
HDAC4-209ENST00000487617 WARSP23381 471 aaKnown RBP21.89■■□□□ 1.09
HDAC4-209ENST00000487617 GABRR2P28476 465 aa21.89■■□□□ 1.09
HDAC4-209ENST00000487617 AP3M2P53677 418 aa21.89■■□□□ 1.09
HDAC4-209ENST00000487617 MYL6P60660 151 aa21.89■■□□□ 1.09
HDAC4-209ENST00000487617 TNNC1P63316 161 aa21.89■■□□□ 1.09
HDAC4-209ENST00000487617 PFKPQ01813 784 aa21.89■■□□□ 1.09
HDAC4-209ENST00000487617 WDR72Q3MJ13 1102 aa21.89■■□□□ 1.09
HDAC4-209ENST00000487617 GAREM2Q75VX8 874 aa21.89■■□□□ 1.09
HDAC4-209ENST00000487617 SPATA2LQ8IUW3 424 aaPredicted RBP21.89■■□□□ 1.09
HDAC4-209ENST00000487617 GUF1Q8N442 669 aaKnown RBP21.89■■□□□ 1.09
HDAC4-209ENST00000487617 ZSCAN18Q8TBC5 510 aaPredicted RBP21.89■■□□□ 1.09
HDAC4-209ENST00000487617 SYT15Q9BQS2 421 aa21.89■■□□□ 1.09
HDAC4-209ENST00000487617 TBC1D17Q9HA65 648 aa21.89■■□□□ 1.09
HDAC4-209ENST00000487617 ABCB6Q9NP58 842 aa21.89■■□□□ 1.09
HDAC4-209ENST00000487617 MYBPHLA2RUH7 354 aa21.88■■□□□ 1.09
HDAC4-209ENST00000487617 PI15O43692 258 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms