RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 CCT8P50990 548 aa4.75□□□□□ -1.65
RBM39-234ENST00000487604 ZNF81P51508 661 aa4.75□□□□□ -1.65
RBM39-234ENST00000487604 HK3P52790 923 aa4.75□□□□□ -1.65
RBM39-234ENST00000487604 NOGQ13253 232 aa4.75□□□□□ -1.65
RBM39-234ENST00000487604 BOP1Q14137 746 aaKnown RBP4.75□□□□□ -1.65
RBM39-234ENST00000487604 VPS53Q5VIR6 699 aa4.75□□□□□ -1.65
RBM39-234ENST00000487604 HEATR3Q7Z4Q2 680 aa4.75□□□□□ -1.65
RBM39-234ENST00000487604 PPP1R32Q7Z5V6 425 aa4.75□□□□□ -1.65
RBM39-234ENST00000487604 USP37Q86T82 979 aa4.75□□□□□ -1.65
RBM39-234ENST00000487604 FAM109AQ8N4B1 249 aa4.75□□□□□ -1.65
RBM39-234ENST00000487604 SEMA6DQ8NFY4 1073 aa4.75□□□□□ -1.65
RBM39-234ENST00000487604 SCARB1Q8WTV0 552 aa4.75□□□□□ -1.65
RBM39-234ENST00000487604 FAM136AQ96C01 138 aa4.75□□□□□ -1.65
RBM39-234ENST00000487604 TINAGL1Q9GZM7 467 aaPredicted RBP4.75□□□□□ -1.65
RBM39-234ENST00000487604 MRPL46Q9H2W6 279 aaKnown RBP4.75□□□□□ -1.65
RBM39-234ENST00000487604 EHD3Q9NZN3 535 aa4.75□□□□□ -1.65
RBM39-234ENST00000487604 SOAT2O75908 522 aa4.74□□□□□ -1.65
RBM39-234ENST00000487604 HNRNPCP07910 306 aaKnown RBP eCLIP4.74□□□□□ -1.657e-7■□□□□ 9.6
RBM39-234ENST00000487604 ITGALP20701 1170 aa4.74□□□□□ -1.65
RBM39-234ENST00000487604 GCLCP48506 637 aaPredicted RBP4.74□□□□□ -1.65
RBM39-234ENST00000487604 BMPR2Q13873 1038 aa4.74□□□□□ -1.65
RBM39-234ENST00000487604 PLAC9Q5JTB6 97 aa4.74□□□□□ -1.65
RBM39-234ENST00000487604 EPHA10Q5JZY3 1008 aa4.74□□□□□ -1.65
RBM39-234ENST00000487604 TNPO1Q92973 898 aaKnown RBP4.74□□□□□ -1.65
RBM39-234ENST00000487604 SIK2Q9H0K1 926 aa4.74□□□□□ -1.65
RBM39-234ENST00000487604 WDCPQ9H6R7 721 aa4.74□□□□□ -1.65
RBM39-234ENST00000487604 SERHLQ9NQF3 203 aa4.74□□□□□ -1.65
RBM39-234ENST00000487604 FLRT1Q9NZU1 646 aa4.74□□□□□ -1.65
RBM39-234ENST00000487604 ZNF70Q9UC06 446 aaPredicted RBP4.74□□□□□ -1.65
RBM39-234ENST00000487604 ABCF2Q9UG63 623 aa4.74□□□□□ -1.65
RBM39-234ENST00000487604 SERGEFQ9UGK8 458 aa4.74□□□□□ -1.65
RBM39-234ENST00000487604 ZDHHC8Q9ULC8 765 aa4.74□□□□□ -1.65
RBM39-234ENST00000487604 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.73□□□□□ -1.65
RBM39-234ENST00000487604 LINC01548A6NM66 108 aa4.73□□□□□ -1.65
RBM39-234ENST00000487604 TARM1B6A8C7 271 aa4.73□□□□□ -1.65
RBM39-234ENST00000487604 PPM1DO15297 605 aa4.73□□□□□ -1.65
RBM39-234ENST00000487604 SLC16A6O15403 523 aa4.73□□□□□ -1.65
RBM39-234ENST00000487604 PDHA1P08559 390 aa4.73□□□□□ -1.65
RBM39-234ENST00000487604 EBLN1P0CF75 366 aa4.73□□□□□ -1.65
RBM39-234ENST00000487604 RECQLP46063 649 aaPredicted RBP4.73□□□□□ -1.65
RBM39-234ENST00000487604 LLGL1Q15334 1064 aa4.73□□□□□ -1.65
RBM39-234ENST00000487604 SRSF7Q16629 238 aaKnown RBP eCLIP4.73□□□□□ -1.655e-7■□□□□ 8.1
RBM39-234ENST00000487604 TMEM119Q4V9L6 283 aa4.73□□□□□ -1.65
RBM39-234ENST00000487604 THEMIS2Q5TEJ8 643 aa4.73□□□□□ -1.65
RBM39-234ENST00000487604 ZNF425Q6IV72 752 aa4.73□□□□□ -1.65
RBM39-234ENST00000487604 ZNF782Q6ZMW2 699 aaPredicted RBP4.73□□□□□ -1.65
RBM39-234ENST00000487604 USP45Q70EL2 814 aa4.73□□□□□ -1.65
RBM39-234ENST00000487604 ZNF551Q7Z340 670 aaPredicted RBP4.73□□□□□ -1.65
RBM39-234ENST00000487604 PPP1R3BQ86XI6 285 aa4.73□□□□□ -1.65
RBM39-234ENST00000487604 KLHDC4Q8TBB5 520 aa4.73□□□□□ -1.65
RBM39-234ENST00000487604 RGMAQ96B86 450 aa4.73□□□□□ -1.65
RBM39-234ENST00000487604 ASPSCR1Q9BZE9 553 aa4.73□□□□□ -1.65
RBM39-234ENST00000487604 WDR26Q9H7D7 661 aa4.73□□□□□ -1.65
RBM39-234ENST00000487604 SPEF1Q9Y4P9 236 aa4.73□□□□□ -1.65
RBM39-234ENST00000487604 AHSGP02765 367 aa4.72□□□□□ -1.65
RBM39-234ENST00000487604 POU2F2P09086 479 aa4.72□□□□□ -1.65
RBM39-234ENST00000487604 FAM163BP0C2L3 166 aa4.72□□□□□ -1.65
RBM39-234ENST00000487604 TYRP14679 529 aa4.72□□□□□ -1.65
RBM39-234ENST00000487604 MAP2K6P52564 334 aa4.72□□□□□ -1.65
RBM39-234ENST00000487604 SSBP2P81877 361 aaPredicted RBP4.72□□□□□ -1.65
RBM39-234ENST00000487604 GRM1Q13255 1194 aa4.72□□□□□ -1.65
RBM39-234ENST00000487604 FAM160B1Q5W0V3 765 aa4.72□□□□□ -1.65
RBM39-234ENST00000487604 SUMO4Q6EEV6 95 aa4.72□□□□□ -1.65
RBM39-234ENST00000487604 DTX2Q86UW9 622 aa4.72□□□□□ -1.65
RBM39-234ENST00000487604 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.72□□□□□ -1.65
RBM39-234ENST00000487604 ATRIPQ8WXE1 791 aa4.72□□□□□ -1.65
RBM39-234ENST00000487604 DDX17Q92841 729 aaKnown RBP4.72□□□□□ -1.65
RBM39-234ENST00000487604 SMAD5Q99717 465 aaKnown RBP4.72□□□□□ -1.65
RBM39-234ENST00000487604 ARHGEF3Q9NR81 526 aa4.72□□□□□ -1.65
RBM39-234ENST00000487604 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.72□□□□□ -1.65
RBM39-234ENST00000487604 ZNF213O14771 459 aa4.71□□□□□ -1.66
RBM39-234ENST00000487604 IGSF3O75054 1194 aa4.71□□□□□ -1.66
RBM39-234ENST00000487604 LATS1O95835 1130 aa4.71□□□□□ -1.66
RBM39-234ENST00000487604 FTLP02792 175 aaPredicted RBP4.71□□□□□ -1.66
RBM39-234ENST00000487604 ERBB2P04626 1255 aa4.71□□□□□ -1.66
RBM39-234ENST00000487604 GNAI2P04899 355 aa4.71□□□□□ -1.66
RBM39-234ENST00000487604 ZNF134P52741 427 aa4.71□□□□□ -1.66
RBM39-234ENST00000487604 SLC10A2Q12908 348 aaPredicted RBP4.71□□□□□ -1.66
RBM39-234ENST00000487604 EIF2B5Q13144 721 aaKnown RBP4.71□□□□□ -1.66
RBM39-234ENST00000487604 EZH2Q15910 746 aaKnown RBP4.71□□□□□ -1.66
RBM39-234ENST00000487604 TMEM108Q6UXF1 575 aa4.71□□□□□ -1.66
RBM39-234ENST00000487604 CPA6Q8N4T0 437 aa4.71□□□□□ -1.66
RBM39-234ENST00000487604 VGLL2Q8N8G2 317 aa4.71□□□□□ -1.66
RBM39-234ENST00000487604 REPS1Q96D71 796 aa4.71□□□□□ -1.66
RBM39-234ENST00000487604 NELL2Q99435 816 aa4.71□□□□□ -1.66
RBM39-234ENST00000487604 LMBRD1Q9NUN5 540 aa4.71□□□□□ -1.66
RBM39-234ENST00000487604 PCDHA1Q9Y5I3 950 aa4.71□□□□□ -1.66
RBM39-234ENST00000487604 M0QYG6 137 aa4.7□□□□□ -1.66
RBM39-234ENST00000487604 DCLK1O15075 740 aa4.7□□□□□ -1.66
RBM39-234ENST00000487604 SNUPNO95149 360 aaKnown RBP4.7□□□□□ -1.66
RBM39-234ENST00000487604 NXPH3O95157 252 aa4.7□□□□□ -1.66
RBM39-234ENST00000487604 NHLRC4P0CG21 123 aaPredicted RBP4.7□□□□□ -1.66
RBM39-234ENST00000487604 PIM1P11309 404 aaPredicted RBP4.7□□□□□ -1.66
RBM39-234ENST00000487604 NDUFB7P17568 137 aa4.7□□□□□ -1.66
RBM39-234ENST00000487604 ALDH9A1P49189 494 aa4.7□□□□□ -1.66
RBM39-234ENST00000487604 SP2Q02086 613 aa4.7□□□□□ -1.66
RBM39-234ENST00000487604 MTX3Q5HYI7 312 aa4.7□□□□□ -1.66
RBM39-234ENST00000487604 ZNF618Q5T7W0 954 aa4.7□□□□□ -1.66
RBM39-234ENST00000487604 MAVSQ7Z434 540 aa4.7□□□□□ -1.66
RBM39-234ENST00000487604 FAM46DQ8NEK8 389 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms