RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 RGS19P49795 217 aa5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 KPNA1P52294 538 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 SEC24CP53992 1094 aa5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 APBA1Q02410 837 aa5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 TAP1Q03518 808 aa5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 AIMP1Q12904 312 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 GRM1Q13255 1194 aa5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 PDCD1Q15116 288 aa5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 RALBP1Q15311 655 aa5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 SF3A1Q15459 793 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 PITRM1Q5JRX3 1037 aa5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 LRCH2Q5VUJ6 765 aa5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 DRICH1Q6PGQ1 229 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 DHX37Q8IY37 1157 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 CMTR2Q8IYT2 770 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 CPEB3Q8NE35 698 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 OR10H5Q8NGA6 315 aa5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 SLC35B2Q8TB61 432 aa5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 MDM1Q8TC05 714 aa5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 DPF2Q92785 391 aa5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 MRFAP1L1Q96HT8 127 aa5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 FAM193BQ96PV7 902 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 DCLRE1CQ96SD1 692 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 GLIS2Q9BZE0 524 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 CYP4F11Q9HBI6 524 aa5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 CNOT7Q9UIV1 285 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 LRRC37AA6NMS7 1700 aa5.09□□□□□ -1.6
SNRNP40-205ENST00000486941 DDX60Q8IY21 1712 aaKnown RBP5.09□□□□□ -1.6
SNRNP40-205ENST00000486941 TBKBP1A7MCY6 615 aa5.08□□□□□ -1.6
SNRNP40-205ENST00000486941 YDJCA8MPS7 323 aa5.08□□□□□ -1.6
SNRNP40-205ENST00000486941 ADCY6O43306 1168 aa5.08□□□□□ -1.6
SNRNP40-205ENST00000486941 ITGA10O75578 1167 aa5.08□□□□□ -1.6
SNRNP40-205ENST00000486941 SPDEFO95238 335 aa5.08□□□□□ -1.6
SNRNP40-205ENST00000486941 ELANEP08246 267 aa5.08□□□□□ -1.6
SNRNP40-205ENST00000486941 HOXB7P09629 217 aa5.08□□□□□ -1.6
SNRNP40-205ENST00000486941 LTA4HP09960 611 aaKnown RBP5.08□□□□□ -1.6
SNRNP40-205ENST00000486941 BMPR1AP36894 532 aa5.08□□□□□ -1.6
SNRNP40-205ENST00000486941 MRPS21P82921 87 aaKnown RBP5.08□□□□□ -1.6
SNRNP40-205ENST00000486941 NOGQ13253 232 aa5.08□□□□□ -1.6
SNRNP40-205ENST00000486941 SF3B3Q15393 1217 aaKnown RBP5.08□□□□□ -1.6
SNRNP40-205ENST00000486941 BMT2Q1RMZ1 405 aa5.08□□□□□ -1.6
SNRNP40-205ENST00000486941 PLBD2Q8NHP8 589 aa5.08□□□□□ -1.6
SNRNP40-205ENST00000486941 NINJ1Q92982 152 aa5.08□□□□□ -1.6
SNRNP40-205ENST00000486941 ISCA1Q9BUE6 129 aa5.08□□□□□ -1.6
SNRNP40-205ENST00000486941 EDARQ9UNE0 448 aa5.08□□□□□ -1.6
SNRNP40-205ENST00000486941 HDAC5Q9UQL6 1122 aa5.08□□□□□ -1.6
SNRNP40-205ENST00000486941 DUOX1Q9NRD9 1551 aa5.08□□□□□ -1.6
SNRNP40-205ENST00000486941 GAGE12BA1L429 117 aa5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 PIPSLA2A3N6 862 aa5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 CCDC78A2IDD5 438 aa5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 GAGE12HA6NDE8 117 aa5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 PRR5-ARHGAP8B1AHC4 643 aa5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 PSMD14O00487 310 aa5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 LPLP06858 475 aa5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 RPS12P25398 132 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 CTSSP25774 331 aa5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 MPLP40238 635 aa5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 HUNKP57058 714 aa5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 RPS8P62241 208 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 PRR16Q569H4 304 aa5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 CCDC178Q5BJE1 867 aa5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 C19orf54Q5BKX5 351 aa5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 ZNF362Q5T0B9 420 aaPredicted RBP5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 SNX33Q8WV41 574 aa5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 CELF1Q92879 486 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 EYA3Q99504 573 aa5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 HYPKQ9NX55 129 aa5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 CHPF2Q9P2E5 772 aa5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 DBF4Q9UBU7 674 aaPredicted RBP5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 POLLQ9UGP5 575 aa5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 COX11Q9Y6N1 276 aa5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 SCN9AQ15858 1988 aa5.07□□□□□ -1.6
SNRNP40-205ENST00000486941 SHTN1A0MZ66 631 aa5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 PPFIA4O75335 1185 aa5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 VIL1P09327 827 aaKnown RBP5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 EGR2P11161 476 aaPredicted RBP5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 HSP90B1P14625 803 aaKnown RBP5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 LMO1P25800 156 aa5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 LSP1P33241 339 aa5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 GPSM2P81274 684 aa5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 TCEA2Q15560 299 aa5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 KRT24Q2M2I5 525 aa5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 CT83Q5H943 113 aa5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 PRAMEF14Q5SWL7 426 aa5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 BROXQ5VW32 411 aa5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 RGMBQ6NW40 437 aa5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 LMBR1LQ6UX01 489 aa5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 KRT26Q7Z3Y9 468 aa5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 PASD1Q8IV76 773 aa5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 SIMC1Q8NDZ2 872 aa5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 REPS2Q8NFH8 660 aa5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 TBC1D16Q8TBP0 767 aa5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 SREK1Q8WXA9 508 aaKnown RBP5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 RUNDC1Q96C34 613 aa5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 DCPSQ96C86 337 aaKnown RBP5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 DBNDD1Q9H9R9 158 aa5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 GBA2Q9HCG7 927 aaPredicted RBP5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 EMC7Q9NPA0 242 aa5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 SAGE1Q9NXZ1 904 aa5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 USP15Q9Y4E8 981 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms