RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 CFHP08603 1231 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 RHOXF2BP0C7M4 288 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 CD19P15391 556 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 AKAP5P24588 427 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 THPOP40225 353 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 GPD2P43304 727 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 GUCY2FP51841 1108 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 NDST1P52848 882 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 RBM10P98175 930 aaKnown RBP12.33□□□□□ -0.44
PRKCB-207ENST00000486868 C2orf54Q08AI8 447 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 PIGHQ14442 188 aaPredicted RBP12.33□□□□□ -0.44
PRKCB-207ENST00000486868 ZNF394Q53GI3 561 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 SEL1L2Q5TEA6 688 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 MMS22LQ6ZRQ5 1243 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 ZNF784Q8NCA9 323 aaPredicted RBP12.33□□□□□ -0.44
PRKCB-207ENST00000486868 C1orf131Q8NDD1 294 aaKnown RBP12.33□□□□□ -0.44
PRKCB-207ENST00000486868 PPP1R13LQ8WUF5 828 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 WNT8BQ93098 351 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 PGBD4Q96DM1 585 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 C18orf8Q96DM3 657 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 RNPC3Q96LT9 517 aaKnown RBP12.33□□□□□ -0.44
PRKCB-207ENST00000486868 HEXIM2Q96MH2 286 aaKnown RBP12.33□□□□□ -0.44
PRKCB-207ENST00000486868 PNKPQ96T60 521 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 PSMB7Q99436 277 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 RHOXF2Q9BQY4 288 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 RNF39Q9H2S5 420 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 RBM12Q9NTZ6 932 aaKnown RBP12.33□□□□□ -0.44
PRKCB-207ENST00000486868 TUBGCP4Q9UGJ1 667 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 HES2Q9Y543 173 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 SNX9Q9Y5X1 595 aa12.33□□□□□ -0.44
PRKCB-207ENST00000486868 GOLGA6L10A0A0M3HER8 536 aa12.32□□□□□ -0.44
PRKCB-207ENST00000486868 KPNA7A9QM74 516 aa12.32□□□□□ -0.44
PRKCB-207ENST00000486868 BHMG1C9JSJ3 638 aaPredicted RBP12.32□□□□□ -0.44
PRKCB-207ENST00000486868 PTGESO14684 152 aa12.32□□□□□ -0.44
PRKCB-207ENST00000486868 ATMINO43313 823 aaPredicted RBP12.32□□□□□ -0.44
PRKCB-207ENST00000486868 MICAL2O94851 1124 aa12.32□□□□□ -0.44
PRKCB-207ENST00000486868 CALCAP01258 141 aa12.32□□□□□ -0.44
PRKCB-207ENST00000486868 WARSP23381 471 aaKnown RBP12.32□□□□□ -0.44
PRKCB-207ENST00000486868 SCNN1AP37088 669 aa12.32□□□□□ -0.44
PRKCB-207ENST00000486868 RAP1GAPP47736 663 aa12.32□□□□□ -0.44
PRKCB-207ENST00000486868 NFX1Q12986 1120 aaKnown RBP12.32□□□□□ -0.44
PRKCB-207ENST00000486868 PAK2Q13177 524 aa12.32□□□□□ -0.44
PRKCB-207ENST00000486868 PKDCCQ504Y2 493 aa12.32□□□□□ -0.44
PRKCB-207ENST00000486868 BEND6Q5SZJ8 279 aaPredicted RBP12.32□□□□□ -0.44
PRKCB-207ENST00000486868 DCAF12L1Q5VU92 463 aa12.32□□□□□ -0.44
PRKCB-207ENST00000486868 C8orf74Q6P047 294 aa12.32□□□□□ -0.44
PRKCB-207ENST00000486868 DENND1BQ6P3S1 775 aa12.32□□□□□ -0.44
PRKCB-207ENST00000486868 DNAJC24Q6P3W2 148 aa12.32□□□□□ -0.44
PRKCB-207ENST00000486868 CCNI2Q6ZMN8 369 aaPredicted RBP12.32□□□□□ -0.44
PRKCB-207ENST00000486868 MAATS1Q7Z4T9 603 aa12.32□□□□□ -0.44
PRKCB-207ENST00000486868 PASD1Q8IV76 773 aa12.32□□□□□ -0.44
PRKCB-207ENST00000486868 RHOT1Q8IXI2 618 aa12.32□□□□□ -0.44
PRKCB-207ENST00000486868 CCDC26Q8TAB7 109 aa12.32□□□□□ -0.44
PRKCB-207ENST00000486868 ZNF296Q8WUU4 475 aaPredicted RBP12.32□□□□□ -0.44
PRKCB-207ENST00000486868 ALG3Q92685 438 aa12.32□□□□□ -0.44
PRKCB-207ENST00000486868 C18orf25Q96B23 403 aaPredicted RBP12.32□□□□□ -0.44
PRKCB-207ENST00000486868 MCRS1Q96EZ8 462 aa12.32□□□□□ -0.44
PRKCB-207ENST00000486868 DDX27Q96GQ7 796 aaKnown RBP12.32□□□□□ -0.44
PRKCB-207ENST00000486868 TWNKQ96RR1 684 aa12.32□□□□□ -0.44
PRKCB-207ENST00000486868 AGO3Q9H9G7 860 aaKnown RBP12.32□□□□□ -0.44
PRKCB-207ENST00000486868 STIM2Q9P246 746 aa12.32□□□□□ -0.44
PRKCB-207ENST00000486868 PADI3Q9ULW8 664 aa12.32□□□□□ -0.44
PRKCB-207ENST00000486868 NOD1Q9Y239 953 aa12.32□□□□□ -0.44
PRKCB-207ENST00000486868 ARVCFO00192 962 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 KRIT1O00522 736 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 RRP9O43818 475 aaKnown RBP12.31□□□□□ -0.44
PRKCB-207ENST00000486868 FGGP02679 453 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 THP07101 528 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 COL6A1P12109 1028 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 RPL34P49207 117 aaKnown RBP12.31□□□□□ -0.44
PRKCB-207ENST00000486868 LILRA4P59901 499 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 VSNL1P62760 191 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 LPIN1Q14693 890 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 CYP1B1Q16678 543 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 SOWAHAQ2M3V2 549 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 ZDHHC17Q8IUH5 632 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 IFT20Q8IY31 132 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 KATNAL2Q8IYT4 538 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 TMEM86AQ8N2M4 240 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 GSTCDQ8NEC7 633 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 APPL2Q8NEU8 664 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 IPO4Q8TEX9 1081 aaKnown RBP12.31□□□□□ -0.44
PRKCB-207ENST00000486868 KRT35Q92764 455 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 TNIP3Q96KP6 325 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 NCAPGQ9BPX3 1015 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 MRPL45Q9BRJ2 306 aaKnown RBP12.31□□□□□ -0.44
PRKCB-207ENST00000486868 LRRC1Q9BTT6 524 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 APOL6Q9BWW8 343 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 EPC1Q9H2F5 836 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 GDF3Q9NR23 364 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 FAM53CQ9NYF3 392 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 L1RE1Q9UN81 338 aa12.31□□□□□ -0.44
PRKCB-207ENST00000486868 A0A1W2PQ45 241 aaPredicted RBP12.3□□□□□ -0.44
PRKCB-207ENST00000486868 A0A1W2PQY0 241 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 ARHGEF37A1IGU5 675 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 FAM187AA6NFU0 413 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 GABRDO14764 452 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 PPEF2O14830 753 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 FSCN2O14926 492 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 HUS1O60921 280 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms