RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.66□□□□□ -0.22
HDAC6-229ENST00000486665 SF3B1O75533 1304 aaKnown RBP eCLIP13.65□□□□□ -0.227e-9■■■■■ 132.1
HDAC6-229ENST00000486665 C19orf67A6NJJ6 358 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 PRR33A8MZF0 331 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 C5orf67F2Z3F1 127 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 LINC01565O15544 149 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 TACC1O75410 805 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 CYP11A1P05108 521 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 FAM163BP0C2L3 166 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 ODC1P11926 461 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 TRIM21P19474 475 aaKnown RBP13.65□□□□□ -0.22
HDAC6-229ENST00000486665 TYMPP19971 482 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 FGFR3P22607 806 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 WARSP23381 471 aaKnown RBP13.65□□□□□ -0.22
HDAC6-229ENST00000486665 TBXAS1P24557 533 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-229ENST00000486665 LMO2P25791 158 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 PPM1AP35813 382 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 GNL1P36915 607 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-229ENST00000486665 JAM2P57087 298 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 PLCB3Q01970 1234 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 RAPGEF1Q13905 1077 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 CTC1Q2NKJ3 1217 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 ENOSF1Q7L5Y1 443 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 DDX53Q86TM3 631 aaKnown RBP13.65□□□□□ -0.22
HDAC6-229ENST00000486665 CEP57Q86XR8 500 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 GPIHBP1Q8IV16 184 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 DRC7Q8IY82 874 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 ADGRF2Q8IZF7 708 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 SPC24Q8NBT2 197 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 SPPL3Q8TCT6 385 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 WHAMMQ8TF30 809 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 TWNKQ96RR1 684 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 RTP3Q9BQQ7 232 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 EDEM3Q9BZQ6 932 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 ALG13Q9NP73 1137 aaKnown RBP13.65□□□□□ -0.22
HDAC6-229ENST00000486665 CEP72Q9P209 647 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 CAPN11Q9UMQ6 739 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 PCDHB4Q9Y5E5 795 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 PLXNA4Q9HCM2 1894 aa13.65□□□□□ -0.22
HDAC6-229ENST00000486665 ZNF318Q5VUA4 2279 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 A0A1W2PQJ5 194 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 CARNS1A5YM72 827 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 GABRDO14764 452 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 SYN3O14994 580 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 TBX10O75333 385 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 CALCAP01258 141 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 SOD2P04179 222 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 RB1P06400 928 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 PDGFRBP09619 1106 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 DNAJB1P25685 340 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 CASP14P31944 242 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 NDST1P52848 882 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 INCA1Q0VD86 236 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 ELAVL2Q12926 359 aaKnown RBP13.64□□□□□ -0.23
HDAC6-229ENST00000486665 ORC1Q13415 861 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 MRPL58Q14197 206 aaKnown RBP13.64□□□□□ -0.23
HDAC6-229ENST00000486665 RTP2Q5QGT7 225 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 VARS2Q5ST30 1063 aaKnown RBP13.64□□□□□ -0.23
HDAC6-229ENST00000486665 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.64□□□□□ -0.23
HDAC6-229ENST00000486665 CACNA2D4Q7Z3S7 1137 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.64□□□□□ -0.23
HDAC6-229ENST00000486665 PPFIBP1Q86W92 1011 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 TMEM86AQ8N2M4 240 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 OR6B3Q8NGW1 331 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 SHC3Q92529 594 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 JAKMIP2Q96AA8 810 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 FAM81BQ96LP2 452 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 LPIN3Q9BQK8 851 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 HERC2P3Q9BVR0 1158 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 PLVAPQ9BX97 442 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 ELOVL4Q9GZR5 314 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 SNX25Q9H3E2 840 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 CHST7Q9NS84 486 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 HMGXB4Q9UGU5 601 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 CNTN6Q9UQ52 1028 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 RWDD3Q9Y3V2 267 aa13.64□□□□□ -0.23
HDAC6-229ENST00000486665 F8VZ95 297 aa13.63□□□□□ -0.23
HDAC6-229ENST00000486665 CILPO75339 1184 aa13.63□□□□□ -0.23
HDAC6-229ENST00000486665 OAZ2O95190 189 aa13.63□□□□□ -0.23
HDAC6-229ENST00000486665 RFX1P22670 979 aa13.63□□□□□ -0.23
HDAC6-229ENST00000486665 ACAT1P24752 427 aaKnown RBP13.63□□□□□ -0.23
HDAC6-229ENST00000486665 IRS1P35568 1242 aa13.63□□□□□ -0.23
HDAC6-229ENST00000486665 USP8P40818 1118 aa13.63□□□□□ -0.23
HDAC6-229ENST00000486665 RAD23BP54727 409 aa13.63□□□□□ -0.23
HDAC6-229ENST00000486665 ADKP55263 362 aaKnown RBP13.63□□□□□ -0.23
HDAC6-229ENST00000486665 KRT17Q04695 432 aa13.63□□□□□ -0.23
HDAC6-229ENST00000486665 USP41Q3LFD5 358 aa13.63□□□□□ -0.23
HDAC6-229ENST00000486665 PUS10Q3MIT2 529 aaKnown RBP13.63□□□□□ -0.23
HDAC6-229ENST00000486665 ZNF394Q53GI3 561 aa13.63□□□□□ -0.23
HDAC6-229ENST00000486665 KIAA0319Q5VV43 1072 aa13.63□□□□□ -0.23
HDAC6-229ENST00000486665 OVOS1Q6IE37 1185 aa13.63□□□□□ -0.23
HDAC6-229ENST00000486665 PDXDC1Q6P996 788 aa13.63□□□□□ -0.23
HDAC6-229ENST00000486665 TMEM270Q6UE05 265 aa13.63□□□□□ -0.23
HDAC6-229ENST00000486665 PRSS55Q6UWB4 352 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-229ENST00000486665 RSPO2Q6UXX9 243 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-229ENST00000486665 METTL23Q86XA0 190 aa13.63□□□□□ -0.23
HDAC6-229ENST00000486665 FAM71AQ8IYT1 594 aa13.63□□□□□ -0.23
HDAC6-229ENST00000486665 VPS52Q8N1B4 723 aa13.63□□□□□ -0.23
HDAC6-229ENST00000486665 LNX1Q8TBB1 728 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-229ENST00000486665 TMEM209Q96SK2 561 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms