RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 SYDE2Q5VT97 1194 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 ADGRD1Q6QNK2 874 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 MOXD1Q6UVY6 613 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 TPH2Q8IWU9 490 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 CYP2W1Q8TAV3 490 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 FAM172AQ8WUF8 416 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 MTBPQ96DY7 904 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 TMEM117Q9H0C3 514 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 EPB41L1Q9H4G0 881 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 S100A14Q9HCY8 104 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 PTTG2Q9NZH5 202 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 PCDHA1Q9Y5I3 950 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 IRS2Q9Y4H2 1338 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 FKBP6O75344 327 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 SLITRK3O94933 977 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 SSTR1P30872 391 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 ARSEP51690 589 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 ITGA9Q13797 1035 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 TFDP1Q14186 410 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 PDK3Q15120 406 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 C2CD6Q53TS8 623 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 ODR4Q5SWX8 454 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 DUS1LQ6P1R4 473 aaKnown RBP11.19□□□□□ -0.62
CCDC171-208ENST00000486641 DPP8Q6V1X1 898 aaPredicted RBP11.19□□□□□ -0.62
CCDC171-208ENST00000486641 RBM44Q6ZP01 1051 aaKnown RBP11.19□□□□□ -0.62
CCDC171-208ENST00000486641 SLC9A9Q8IVB4 645 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 GSTCDQ8NEC7 633 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 ZSWIM2Q8NEG5 633 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 PLEKHO2Q8TD55 490 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 PYDC1Q8WXC3 89 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 DDX1Q92499 740 aaKnown RBP11.19□□□□□ -0.62
CCDC171-208ENST00000486641 ABTB1Q969K4 478 aaPredicted RBP11.19□□□□□ -0.62
CCDC171-208ENST00000486641 SUDS3Q9H7L9 328 aaPredicted RBP11.19□□□□□ -0.62
CCDC171-208ENST00000486641 DDX18Q9NVP1 670 aaKnown RBP11.19□□□□□ -0.62
CCDC171-208ENST00000486641 NDUFA13Q9P0J0 144 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 ADAMTS6Q9UKP5 1117 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 DNPEPQ9ULA0 475 aa11.19□□□□□ -0.62
CCDC171-208ENST00000486641 CLUHO75153 1309 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 GOLGA8SH3BPF8 625 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 GOLGA8MH3BSY2 632 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 STK10O94804 968 aaKnown RBP11.18□□□□□ -0.62
CCDC171-208ENST00000486641 CD58P19256 250 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 TAS2R40P59535 323 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 TBL3Q12788 808 aaKnown RBP11.18□□□□□ -0.62
CCDC171-208ENST00000486641 QRICH1Q2TAL8 776 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 UGT2A3Q6UWM9 527 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 B3GNT6Q6ZMB0 384 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 ADGRG6Q86SQ4 1221 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 DHDDSQ86SQ9 333 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 SLC51AQ86UW1 340 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 TTC17Q96AE7 1141 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 ELMO3Q96BJ8 720 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 HAUS1Q96CS2 278 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 CLMNQ96JQ2 1002 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 FAM20AQ96MK3 541 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 PRICKLE1Q96MT3 831 aaPredicted RBP11.18□□□□□ -0.62
CCDC171-208ENST00000486641 PAFAH2Q99487 392 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 PPCSQ9HAB8 311 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 UBE4BO95155 1302 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 IGKV6D-41A0A0C4DH26 115 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 SPECC1L-ADORA2AF8WAN1 911 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 P4HA2O15460 535 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 LPXNO60711 386 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 DHRS4L1P0CG22 281 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 SMIM18P0DKX4 95 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 GJC1P36383 396 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 ETV4P43268 484 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 CHN2P52757 468 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 ADARP55265 1226 aaKnown RBP11.18□□□□□ -0.62
CCDC171-208ENST00000486641 GAD2Q05329 585 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 CLEC16AQ2KHT3 1053 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 MMEL1Q495T6 779 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 KLC3Q6P597 504 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 FBXL19Q6PCT2 694 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 KLHDC10Q6PID8 442 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 CENPUQ71F23 418 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 NLRX1Q86UT6 975 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 SHC3Q92529 594 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 SEMA4DQ92854 862 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 CATSPER2Q96P56 530 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 FAM111AQ96PZ2 611 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 HSD17B14Q9BPX1 270 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 KLHL4Q9C0H6 718 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 USP29Q9HBJ7 922 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 PPARGC1AQ9UBK2 798 aaKnown RBP11.18□□□□□ -0.62
CCDC171-208ENST00000486641 TAGLN3Q9UI15 199 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 ZNF148Q9UQR1 794 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 STK24Q9Y6E0 443 aa11.18□□□□□ -0.62
CCDC171-208ENST00000486641 A0A088AWK7 358 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 DENND3A2RUS2 1198 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 LIASO43766 372 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 CDK4P11802 303 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 KRT10P13645 584 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 GTF2H1P32780 548 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 ABCD1P33897 745 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 MFAP3P55082 362 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 PDE1BQ01064 536 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 PTP4A2Q12974 167 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 MTA1Q13330 715 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 NCOA4Q13772 614 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms