RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 HGSNATQ68CP4 663 aa16.89■□□□□ 0.29
APOE-205ENST00000485628 SLC8B1Q6J4K2 584 aa16.89■□□□□ 0.29
APOE-205ENST00000485628 WDR59Q6PJI9 974 aa16.89■□□□□ 0.29
APOE-205ENST00000485628 ANKS3Q6ZW76 656 aa16.89■□□□□ 0.29
APOE-205ENST00000485628 DRC7Q8IY82 874 aa16.89■□□□□ 0.29
APOE-205ENST00000485628 DDX1Q92499 740 aaKnown RBP16.89■□□□□ 0.29
APOE-205ENST00000485628 TIFAQ96CG3 184 aa16.89■□□□□ 0.29
APOE-205ENST00000485628 B3GALT6Q96L58 329 aa16.89■□□□□ 0.29
APOE-205ENST00000485628 PPP1R9BQ96SB3 815 aa16.89■□□□□ 0.29
APOE-205ENST00000485628 NT5C1AQ9BXI3 368 aa16.89■□□□□ 0.29
APOE-205ENST00000485628 DDX43Q9NXZ2 648 aaKnown RBP16.89■□□□□ 0.29
APOE-205ENST00000485628 FNIP2Q9P278 1114 aa16.89■□□□□ 0.29
APOE-205ENST00000485628 PTPRDP23468 1912 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 CDH23Q9H251 3354 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 EPOPA6NHQ4 379 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 GRM6O15303 877 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 CYP26A1O43174 497 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 LPXNO60711 386 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 CD58P19256 250 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 ADKP55263 362 aaKnown RBP16.88■□□□□ 0.29
APOE-205ENST00000485628 ERVFC1P60507 584 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 CDK17Q00537 523 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 PPP2R2DQ66LE6 453 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 TMEM270Q6UE05 265 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 CACNA2D4Q7Z3S7 1137 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 LRRTM3Q86VH5 581 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 PPFIBP1Q86W92 1011 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 METTL23Q86XA0 190 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 RBBP8NLQ8NC74 664 aaPredicted RBP16.88■□□□□ 0.29
APOE-205ENST00000485628 OR8K1Q8NGG5 319 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 OR6B3Q8NGW1 331 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 CPLX3Q8WVH0 158 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 TMEM176AQ96HP8 235 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 SPAG5Q96R06 1193 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 ZCWPW1Q9H0M4 648 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 DPEP3Q9H4B8 488 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 SLC28A3Q9HAS3 691 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 ALG13Q9NP73 1137 aaKnown RBP16.88■□□□□ 0.29
APOE-205ENST00000485628 CRTAC1Q9NQ79 661 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 NOCTQ9UK39 431 aaKnown RBP16.88■□□□□ 0.29
APOE-205ENST00000485628 CDH9Q9ULB4 789 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 KIAA1257Q9ULG3 409 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 PCDHB4Q9Y5E5 795 aa16.88■□□□□ 0.29
APOE-205ENST00000485628 MYO7AQ13402 2215 aa16.87■□□□□ 0.29
APOE-205ENST00000485628 TMEM265A0A087WTH1 108 aa16.87■□□□□ 0.29
APOE-205ENST00000485628 OR6C75A6NL08 312 aa16.87■□□□□ 0.29
APOE-205ENST00000485628 AKR1B15C9JRZ8 316 aaPredicted RBP16.87■□□□□ 0.29
APOE-205ENST00000485628 PCSK1P29120 753 aa16.87■□□□□ 0.29
APOE-205ENST00000485628 GLUD2P49448 558 aa16.87■□□□□ 0.29
APOE-205ENST00000485628 PTPN14Q15678 1187 aa16.87■□□□□ 0.29
APOE-205ENST00000485628 INTS6LQ5JSJ4 861 aaKnown RBP16.87■□□□□ 0.29
APOE-205ENST00000485628 PRSS55Q6UWB4 352 aaPredicted RBP16.87■□□□□ 0.29
APOE-205ENST00000485628 PAQR9Q6ZVX9 377 aa16.87■□□□□ 0.29
APOE-205ENST00000485628 CNGA4Q8IV77 575 aa16.87■□□□□ 0.29
APOE-205ENST00000485628 FMNL3Q8IVF7 1028 aa16.87■□□□□ 0.29
APOE-205ENST00000485628 FBXO22Q8NEZ5 403 aa16.87■□□□□ 0.29
APOE-205ENST00000485628 POF1BQ8WVV4 589 aa16.87■□□□□ 0.29
APOE-205ENST00000485628 TFAP2BQ92481 460 aa16.87■□□□□ 0.29
APOE-205ENST00000485628 PANX2Q96RD6 677 aa16.87■□□□□ 0.29
APOE-205ENST00000485628 TMEM209Q96SK2 561 aa16.87■□□□□ 0.29
APOE-205ENST00000485628 CLSTN3Q9BQT9 956 aa16.87■□□□□ 0.29
APOE-205ENST00000485628 SNX25Q9H3E2 840 aa16.87■□□□□ 0.29
APOE-205ENST00000485628 ACP6Q9NPH0 428 aa16.87■□□□□ 0.29
APOE-205ENST00000485628 ABHD10Q9NUJ1 306 aa16.87■□□□□ 0.29
APOE-205ENST00000485628 PUF60Q9UHX1 559 aaKnown RBP16.87■□□□□ 0.29
APOE-205ENST00000485628 A8MXQ7 604 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 H7C4K7 107 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 ADAM12O43184 909 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 ATP2C2O75185 946 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 VNN2O95498 520 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 C1RP00736 705 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 PDGFRBP09619 1106 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 FERP16591 822 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 PTPN1P18031 435 aaKnown RBP16.86■□□□□ 0.29
APOE-205ENST00000485628 GOLGA8FQ08AF8 430 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 GOLGA8DPQ0D2H9 430 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 PKDCCQ504Y2 493 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 SFMBT2Q5VUG0 894 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 ARHGAP17Q68EM7 881 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 SLC47A2Q86VL8 602 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 CEP57Q86XR8 500 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 TMEM139Q8IV31 216 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 THEM5Q8N1Q8 247 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 MRPL43Q8N983 215 aaKnown RBP16.86■□□□□ 0.29
APOE-205ENST00000485628 SPC24Q8NBT2 197 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 B3GALNT2Q8NCR0 500 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 ZNF397Q8NF99 534 aaPredicted RBP16.86■□□□□ 0.29
APOE-205ENST00000485628 MYCBPAPQ8TBZ2 947 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 EPS8L1Q8TE68 723 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 ZNF606Q8WXB4 792 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 RIN2Q8WYP3 895 aaPredicted RBP16.86■□□□□ 0.29
APOE-205ENST00000485628 TNIP3Q96KP6 325 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 LPIN3Q9BQK8 851 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 LMAN2LQ9H0V9 348 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 SSX2IPQ9Y2D8 614 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 MYO9BQ13459 2157 aa16.86■□□□□ 0.29
APOE-205ENST00000485628 MYBPHLA2RUH7 354 aa16.85■□□□□ 0.29
APOE-205ENST00000485628 C2orf71A6NGG8 1288 aa16.85■□□□□ 0.29
APOE-205ENST00000485628 GFPT2O94808 682 aa16.85■□□□□ 0.29
APOE-205ENST00000485628 ABLIM3O94929 683 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms