RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 PRKCSHP14314 528 aaPredicted RBP13.11□□□□□ -0.31
TRA2B-213ENST00000485530 TYMPP19971 482 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 PAX3P23760 479 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 ASPAP45381 313 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 RAP1GAPP47736 663 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 CDR1P51861 262 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 MYL7Q01449 175 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 SIGLEC14Q08ET2 396 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 LRMPQ12912 555 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 CBX2Q14781 532 aaPredicted RBP13.11□□□□□ -0.31
TRA2B-213ENST00000485530 ZNF699Q32M78 642 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 KIAA1841Q6NSI8 718 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 PHLDB3Q6NSJ2 640 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 RBM23Q86U06 439 aaKnown RBP13.11□□□□□ -0.31
TRA2B-213ENST00000485530 LRRTM3Q86VH5 581 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 RNF214Q8ND24 703 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 TAF4BQ92750 862 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 KAT5Q92993 513 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 ZNF560Q96MR9 790 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 ARID3AQ99856 593 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 LPIN3Q9BQK8 851 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 RBSNQ9H1K0 784 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 SMYD3Q9H7B4 428 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 NGRNQ9NPE2 291 aaKnown RBP13.11□□□□□ -0.31
TRA2B-213ENST00000485530 ENTPD7Q9NQZ7 604 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 MRPL17Q9NRX2 175 aaKnown RBP13.11□□□□□ -0.31
TRA2B-213ENST00000485530 FBXL5Q9UKA1 691 aa13.11□□□□□ -0.31
TRA2B-213ENST00000485530 VWA8A3KMH1 1905 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.1□□□□□ -0.31
TRA2B-213ENST00000485530 BECN2A8MW95 431 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 P4HA2O15460 535 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 TEX33O43247 280 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 CLASP2O75122 1294 aaKnown RBP13.1□□□□□ -0.31
TRA2B-213ENST00000485530 ATP2C2O75185 946 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 CDK11BP21127 795 aaKnown RBP13.1□□□□□ -0.31
TRA2B-213ENST00000485530 PON1P27169 355 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 KLK7P49862 253 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 KCNC3Q14003 757 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 SMC1AQ14683 1233 aaKnown RBP13.1□□□□□ -0.31
TRA2B-213ENST00000485530 PSMD5Q16401 504 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 PTPN21Q16825 1174 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 CCDC142Q17RM4 750 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 ZNF667Q5HYK9 610 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 OVOS1Q6IE37 1185 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 PDE12Q6L8Q7 609 aaKnown RBP13.1□□□□□ -0.31
TRA2B-213ENST00000485530 GJB7Q6PEY0 223 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 LILRA6Q6PI73 481 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 DPH6Q7L8W6 267 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 GLYCTKQ8IVS8 523 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 ARHGEF19Q8IW93 802 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 GPR65Q8IYL9 337 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 TOP6BLQ8N6T0 577 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 APPL2Q8NEU8 664 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 VN1R2Q8NFZ6 395 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 OR10T2Q8NGX3 314 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 FEZF2Q8TBJ5 459 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 SLC22A17Q8WUG5 538 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 ATOH1Q92858 354 aaPredicted RBP13.1□□□□□ -0.31
TRA2B-213ENST00000485530 MMS19Q96T76 1030 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 BCO2Q9BYV7 579 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 INTS2Q9H0H0 1204 aaKnown RBP13.1□□□□□ -0.31
TRA2B-213ENST00000485530 SIX2Q9NPC8 291 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 CLEC1BQ9P126 229 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 FNIP2Q9P278 1114 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 MTRRQ9UBK8 725 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 BACE2Q9Y5Z0 518 aa13.1□□□□□ -0.31
TRA2B-213ENST00000485530 PROB1E7EW31 1015 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 AP5Z1O43299 807 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 HUS1O60921 280 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 TACC1O75410 805 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 VNN2O95498 520 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 URODP06132 367 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 OR4Q2P0C623 313 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 SPATA31D3P0C874 917 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 ODC1P11926 461 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 AVPR2P30518 371 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 OR1D2P34982 312 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 NRIP1P48552 1158 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 NOP14P78316 857 aaKnown RBP13.09□□□□□ -0.31
TRA2B-213ENST00000485530 YWHAHQ04917 246 aaPredicted RBP13.09□□□□□ -0.31
TRA2B-213ENST00000485530 CTXN3Q4LDR2 81 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 SLC8B1Q6J4K2 584 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 SPATA31D4Q6ZUB0 917 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 ANKS3Q6ZW76 656 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 ASCL5Q7RTU5 278 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 PALB2Q86YC2 1186 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 WHAMMQ8TF30 809 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 PKMYT1Q99640 499 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 IRF2BPLQ9H1B7 796 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 TLE6Q9H808 572 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 RTN4Q9NQC3 1192 aaKnown RBP13.09□□□□□ -0.31
TRA2B-213ENST00000485530 TMLHEQ9NVH6 421 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 STK39Q9UEW8 545 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 AJAP1Q9UKB5 411 aaPredicted RBP13.09□□□□□ -0.31
TRA2B-213ENST00000485530 R3HCC1Q9Y3T6 440 aaKnown RBP13.09□□□□□ -0.31
TRA2B-213ENST00000485530 USP15Q9Y4E8 981 aaPredicted RBP13.09□□□□□ -0.31
TRA2B-213ENST00000485530 CDY1Q9Y6F8 540 aa13.09□□□□□ -0.31
TRA2B-213ENST00000485530 GTPBP10A4D1E9 387 aaKnown RBP13.08□□□□□ -0.32
TRA2B-213ENST00000485530 H0Y858 1186 aa13.08□□□□□ -0.32
TRA2B-213ENST00000485530 N4BP1O75113 896 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms