RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 RAD23BP54727 409 aa18.74■□□□□ 0.59
CHMP3-207ENST00000485465 ADKP55263 362 aaKnown RBP18.74■□□□□ 0.59
CHMP3-207ENST00000485465 ORC1Q13415 861 aa18.74■□□□□ 0.59
CHMP3-207ENST00000485465 ZNF280DQ6N043 979 aa18.74■□□□□ 0.59
CHMP3-207ENST00000485465 PRSS55Q6UWB4 352 aaPredicted RBP18.74■□□□□ 0.59
CHMP3-207ENST00000485465 GPR65Q8IYL9 337 aa18.74■□□□□ 0.59
CHMP3-207ENST00000485465 ARNTL2Q8WYA1 636 aa18.74■□□□□ 0.59
CHMP3-207ENST00000485465 TMEM176AQ96HP8 235 aa18.74■□□□□ 0.59
CHMP3-207ENST00000485465 ACBD6Q9BR61 282 aa18.74■□□□□ 0.59
CHMP3-207ENST00000485465 RANBP2P49792 3224 aaKnown RBP18.74■□□□□ 0.59
CHMP3-207ENST00000485465 TSC2P49815 1807 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 C2CD2LO14523 706 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 TBC1D4O60343 1298 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 MFAP3LO75121 409 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 GFPT2O94808 682 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 PAEPP09466 180 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 ACAT1P24752 427 aaKnown RBP18.73■□□□□ 0.59
CHMP3-207ENST00000485465 DNAJB1P25685 340 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 CLCN1P35523 988 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 GOLGA8FQ08AF8 430 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 GOLGA8DPQ0D2H9 430 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 ARID5BQ14865 1188 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 PSMD5Q16401 504 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 CTXN3Q4LDR2 81 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 SFMBT2Q5VUG0 894 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 ACOT1Q86TX2 421 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 CNGA4Q8IV77 575 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 FMNL3Q8IVF7 1028 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 CRYBG2Q8N1P7 616 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 SLC4A11Q8NBS3 891 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 OR10T2Q8NGX3 314 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 SYN2Q92777 582 aaPredicted RBP18.73■□□□□ 0.59
CHMP3-207ENST00000485465 TNIP3Q96KP6 325 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 OXCT2Q9BYC2 517 aaPredicted RBP18.73■□□□□ 0.59
CHMP3-207ENST00000485465 DNAI2Q9GZS0 605 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 DPEP3Q9H4B8 488 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 MRPL17Q9NRX2 175 aaKnown RBP18.73■□□□□ 0.59
CHMP3-207ENST00000485465 AIPL1Q9NZN9 384 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 MTRRQ9UBK8 725 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 CDH9Q9ULB4 789 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 SSX2IPQ9Y2D8 614 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 BACE2Q9Y5Z0 518 aa18.73■□□□□ 0.59
CHMP3-207ENST00000485465 LAMA2P24043 3122 aaKnown RBP18.72■□□□□ 0.59
CHMP3-207ENST00000485465 OR6C75A6NL08 312 aa18.72■□□□□ 0.59
CHMP3-207ENST00000485465 GOLGA6L6A8MZA4 724 aa18.72■□□□□ 0.59
CHMP3-207ENST00000485465 LILRB3O75022 631 aa18.72■□□□□ 0.59
CHMP3-207ENST00000485465 FERP16591 822 aa18.72■□□□□ 0.59
CHMP3-207ENST00000485465 PTPN1P18031 435 aaKnown RBP18.72■□□□□ 0.59
CHMP3-207ENST00000485465 ERVFC1P60507 584 aa18.72■□□□□ 0.59
CHMP3-207ENST00000485465 ASIC2Q16515 512 aa18.72■□□□□ 0.59
CHMP3-207ENST00000485465 TMC7Q7Z402 723 aa18.72■□□□□ 0.59
CHMP3-207ENST00000485465 GPIHBP1Q8IV16 184 aa18.72■□□□□ 0.59
CHMP3-207ENST00000485465 TC2NQ8N9U0 490 aa18.72■□□□□ 0.59
CHMP3-207ENST00000485465 OR8K1Q8NGG5 319 aa18.72■□□□□ 0.59
CHMP3-207ENST00000485465 AUTS2Q8WXX7 1259 aa18.72■□□□□ 0.59
CHMP3-207ENST00000485465 PDLIM2Q96JY6 352 aa18.72■□□□□ 0.59
CHMP3-207ENST00000485465 HEXIM2Q96MH2 286 aaKnown RBP18.72■□□□□ 0.59
CHMP3-207ENST00000485465 DNAJC7Q99615 494 aa18.72■□□□□ 0.59
CHMP3-207ENST00000485465 SYT15Q9BQS2 421 aa18.72■□□□□ 0.59
CHMP3-207ENST00000485465 TLR9Q9NR96 1032 aa18.72■□□□□ 0.59
CHMP3-207ENST00000485465 VWA8A3KMH1 1905 aa18.72■□□□□ 0.59
CHMP3-207ENST00000485465 PLXNA4Q9HCM2 1894 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 EPOPA6NHQ4 379 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 FSCN2O14926 492 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 ATP2C2O75185 946 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 CXCL14O95715 111 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 CCDC172P0C7W6 258 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 BPIFB4P59827 614 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 PSMC1P62191 440 aaKnown RBP18.71■□□□□ 0.59
CHMP3-207ENST00000485465 TSPY1Q01534 308 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 ARID5AQ03989 594 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 PTK2Q05397 1052 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 CAMK1Q14012 370 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 BMS1Q14692 1282 aaKnown RBP18.71■□□□□ 0.59
CHMP3-207ENST00000485465 PTPN14Q15678 1187 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 INTS6LQ5JSJ4 861 aaKnown RBP18.71■□□□□ 0.59
CHMP3-207ENST00000485465 E4F1Q66K89 784 aaPredicted RBP18.71■□□□□ 0.59
CHMP3-207ENST00000485465 RSPO2Q6UXX9 243 aaPredicted RBP18.71■□□□□ 0.59
CHMP3-207ENST00000485465 IRF2BP2Q7Z5L9 587 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 B3GALNT2Q8NCR0 500 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 TMEM209Q96SK2 561 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 TCF25Q9BQ70 676 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 LPIN3Q9BQK8 851 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 ZCWPW1Q9H0M4 648 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 RXFP1Q9HBX9 757 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 ACP6Q9NPH0 428 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 CRTAC1Q9NQ79 661 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 ENTPD7Q9NQZ7 604 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.71■□□□□ 0.59
CHMP3-207ENST00000485465 ABHD10Q9NUJ1 306 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 KIAA1257Q9ULG3 409 aa18.71■□□□□ 0.59
CHMP3-207ENST00000485465 MYBPHLA2RUH7 354 aa18.7■□□□□ 0.58
CHMP3-207ENST00000485465 CALCAP01258 141 aa18.7■□□□□ 0.58
CHMP3-207ENST00000485465 VDRP11473 427 aa18.7■□□□□ 0.58
CHMP3-207ENST00000485465 HNRNPH3P31942 346 aaKnown RBP18.7■□□□□ 0.58
CHMP3-207ENST00000485465 CREMQ03060 361 aa18.7■□□□□ 0.58
CHMP3-207ENST00000485465 SMC1AQ14683 1233 aaKnown RBP18.7■□□□□ 0.58
CHMP3-207ENST00000485465 TSR1Q2NL82 804 aaKnown RBP18.7■□□□□ 0.58
CHMP3-207ENST00000485465 FAM171BQ6P995 826 aa18.7■□□□□ 0.58
CHMP3-207ENST00000485465 LRRTM3Q86VH5 581 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms