RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 MFSD1Q9H3U5 465 aa13.19□□□□□ -0.3
MSH5-216ENST00000484309 GDAP2Q9NXN4 497 aa13.19□□□□□ -0.3
MSH5-216ENST00000484309 CA14Q9ULX7 337 aa13.19□□□□□ -0.3
MSH5-216ENST00000484309 MAFFQ9ULX9 164 aa13.19□□□□□ -0.3
MSH5-216ENST00000484309 ZFP37Q9Y6Q3 630 aaPredicted RBP13.19□□□□□ -0.3
MSH5-216ENST00000484309 LRRIQ3A6PVS8 624 aaPredicted RBP13.18□□□□□ -0.3
MSH5-216ENST00000484309 CALUO43852 315 aaPredicted RBP13.18□□□□□ -0.3
MSH5-216ENST00000484309 MOSPD3O75425 235 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 SRFP11831 508 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 ATF6P18850 670 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 GPR15P49685 360 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 MYL6P60660 151 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 DLG4P78352 724 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 MYL7Q01449 175 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 FAM160A1Q05DH4 1040 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 BIRC3Q13489 604 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 SNW1Q13573 536 aaKnown RBP13.18□□□□□ -0.3
MSH5-216ENST00000484309 TEAD2Q15562 447 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 INTS6LQ5JSJ4 861 aaKnown RBP13.18□□□□□ -0.3
MSH5-216ENST00000484309 IER5LQ5T953 404 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 SDHAF4Q5VUM1 108 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 MTSS1LQ765P7 747 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 TMC8Q8IU68 726 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 DCP1BQ8IZD4 617 aaKnown RBP13.18□□□□□ -0.3
MSH5-216ENST00000484309 SIX5Q8N196 739 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 TMEM86AQ8N2M4 240 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 TOP6BLQ8N6T0 577 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 FLCNQ8NFG4 579 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 ENGASEQ8NFI3 743 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 SHKBP1Q8TBC3 707 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 GIPC2Q8TF65 315 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 KBTBD7Q8WVZ9 684 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 MMS19Q96T76 1030 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 PI4K2AQ9BTU6 479 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 PLA2G2FQ9BZM2 168 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 ZNF334Q9HCZ1 680 aaPredicted RBP13.18□□□□□ -0.3
MSH5-216ENST00000484309 AVENQ9NQS1 362 aaPredicted RBP13.18□□□□□ -0.3
MSH5-216ENST00000484309 DMAC2Q9NW81 257 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 COL4A2P08572 1712 aa13.18□□□□□ -0.3
MSH5-216ENST00000484309 A0A1W2PRU2 124 aa13.17□□□□□ -0.3
MSH5-216ENST00000484309 ZNF197O14709 1029 aa13.17□□□□□ -0.3
MSH5-216ENST00000484309 PHACTR2O75167 634 aa13.17□□□□□ -0.3
MSH5-216ENST00000484309 ATP2C2O75185 946 aa13.17□□□□□ -0.3
MSH5-216ENST00000484309 GADD45BO75293 160 aaPredicted RBP13.17□□□□□ -0.3
MSH5-216ENST00000484309 PRPF40AO75400 957 aaKnown RBP13.17□□□□□ -0.3
MSH5-216ENST00000484309 NR2F2P24468 414 aa13.17□□□□□ -0.3
MSH5-216ENST00000484309 PSMC1P62191 440 aaKnown RBP13.17□□□□□ -0.3
MSH5-216ENST00000484309 TRPC3Q13507 836 aa13.17□□□□□ -0.3
MSH5-216ENST00000484309 KCNB1Q14721 858 aa13.17□□□□□ -0.3
MSH5-216ENST00000484309 FAM78AQ5JUQ0 283 aa13.17□□□□□ -0.3
MSH5-216ENST00000484309 STXBP5Q5T5C0 1151 aa13.17□□□□□ -0.3
MSH5-216ENST00000484309 TDRD10Q5VZ19 366 aaKnown RBP13.17□□□□□ -0.3
MSH5-216ENST00000484309 DNAJB7Q7Z6W7 309 aaPredicted RBP13.17□□□□□ -0.3
MSH5-216ENST00000484309 GPIHBP1Q8IV16 184 aa13.17□□□□□ -0.3
MSH5-216ENST00000484309 SLC9A9Q8IVB4 645 aa13.17□□□□□ -0.3
MSH5-216ENST00000484309 SPPL2BQ8TCT7 592 aa13.17□□□□□ -0.3
MSH5-216ENST00000484309 PARD3BQ8TEW8 1205 aa13.17□□□□□ -0.3
MSH5-216ENST00000484309 NXPE3Q969Y0 559 aa13.17□□□□□ -0.3
MSH5-216ENST00000484309 CCDC34Q96HJ3 373 aa13.17□□□□□ -0.3
MSH5-216ENST00000484309 ZSWIM3Q96MP5 696 aa13.17□□□□□ -0.3
MSH5-216ENST00000484309 ACBD6Q9BR61 282 aa13.17□□□□□ -0.3
MSH5-216ENST00000484309 MRPL45Q9BRJ2 306 aaKnown RBP13.17□□□□□ -0.3
MSH5-216ENST00000484309 LRRC3Q9BY71 257 aa13.17□□□□□ -0.3
MSH5-216ENST00000484309 SLITRK6Q9H5Y7 841 aa13.17□□□□□ -0.3
MSH5-216ENST00000484309 GTF3C4Q9UKN8 822 aa13.17□□□□□ -0.3
MSH5-216ENST00000484309 PCDHB5Q9Y5E4 795 aa13.17□□□□□ -0.3
MSH5-216ENST00000484309 HELZP42694 1942 aaKnown RBP13.17□□□□□ -0.3
MSH5-216ENST00000484309 MYBPHLA2RUH7 354 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 KRBA1A5PL33 1030 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 KIF20AO95235 890 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 PDGFRBP09619 1106 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 HAPLN1P10915 354 aaPredicted RBP13.16□□□□□ -0.3
MSH5-216ENST00000484309 FCARP24071 287 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 CYP2F1P24903 491 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 LMO2P25791 158 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 GABRR2P28476 465 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 AVPR2P30518 371 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 TUFMP49411 452 aaKnown RBP13.16□□□□□ -0.3
MSH5-216ENST00000484309 EPHA5P54756 1037 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 TNNC1P63316 161 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 GPC5P78333 572 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 GRM2Q14416 872 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 VEPH1Q14D04 833 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 WDR72Q3MJ13 1102 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 CWF19L1Q69YN2 538 aaKnown RBP13.16□□□□□ -0.3
MSH5-216ENST00000484309 TANGO2Q6ICL3 276 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 SCARA5Q6ZMJ2 495 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 GUF1Q8N442 669 aaKnown RBP13.16□□□□□ -0.3
MSH5-216ENST00000484309 TMEM105Q8N8V8 129 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 PSMG2Q969U7 264 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 PKMYT1Q99640 499 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 SYT15Q9BQS2 421 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 GDE1Q9NZC3 331 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 NXF1Q9UBU9 619 aaKnown RBP13.16□□□□□ -0.3
MSH5-216ENST00000484309 TRAF3IP3Q9Y228 551 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 FRMD4BQ9Y2L6 1034 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 NME7Q9Y5B8 376 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 MYO16Q9Y6X6 1858 aa13.16□□□□□ -0.3
MSH5-216ENST00000484309 STK25O00506 426 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 GABRDO14764 452 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms