RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 C2CD4DB7Z1M9 353 aa28.39■■■□□ 2.14
GTF3C4-202ENST00000483873 LRG1P02750 347 aa28.39■■■□□ 2.14
GTF3C4-202ENST00000483873 PTMSP20962 102 aa28.39■■■□□ 2.14
GTF3C4-202ENST00000483873 MYL7Q01449 175 aa28.39■■■□□ 2.14
GTF3C4-202ENST00000483873 NFKBIBQ15653 356 aa28.39■■■□□ 2.14
GTF3C4-202ENST00000483873 DCAF17Q5H9S7 520 aaPredicted RBP28.39■■■□□ 2.14
GTF3C4-202ENST00000483873 SPOPLQ6IQ16 392 aa28.39■■■□□ 2.14
GTF3C4-202ENST00000483873 FOXR2Q6PJQ5 311 aa28.39■■■□□ 2.14
GTF3C4-202ENST00000483873 SPATA18Q8TC71 538 aa28.39■■■□□ 2.14
GTF3C4-202ENST00000483873 CEP63Q96MT8 703 aa28.39■■■□□ 2.14
GTF3C4-202ENST00000483873 SMYD3Q9H7B4 428 aa28.39■■■□□ 2.14
GTF3C4-202ENST00000483873 TMEM8AQ9HCN3 771 aa28.39■■■□□ 2.14
GTF3C4-202ENST00000483873 MAFFQ9ULX9 164 aa28.39■■■□□ 2.14
GTF3C4-202ENST00000483873 YIPF1Q9Y548 306 aa28.39■■■□□ 2.14
GTF3C4-202ENST00000483873 NME7Q9Y5B8 376 aa28.39■■■□□ 2.14
GTF3C4-202ENST00000483873 XYLBO75191 536 aa28.38■■■□□ 2.13
GTF3C4-202ENST00000483873 WARSP23381 471 aaKnown RBP28.38■■■□□ 2.13
GTF3C4-202ENST00000483873 LMO2P25791 158 aa28.38■■■□□ 2.13
GTF3C4-202ENST00000483873 LHX1P48742 406 aa28.38■■■□□ 2.13
GTF3C4-202ENST00000483873 TWF1Q12792 350 aa28.38■■■□□ 2.13
GTF3C4-202ENST00000483873 ZNF667Q5HYK9 610 aa28.38■■■□□ 2.13
GTF3C4-202ENST00000483873 TCERG1LQ5VWI1 586 aa28.38■■■□□ 2.13
GTF3C4-202ENST00000483873 SCARA5Q6ZMJ2 495 aa28.38■■■□□ 2.13
GTF3C4-202ENST00000483873 FILIP1Q7Z7B0 1213 aa28.38■■■□□ 2.13
GTF3C4-202ENST00000483873 KHSRPQ92945 711 aaKnown RBP eCLIP28.38■■■□□ 2.13
GTF3C4-202ENST00000483873 MED15Q96RN5 788 aa28.38■■■□□ 2.13
GTF3C4-202ENST00000483873 ACBD6Q9BR61 282 aa28.38■■■□□ 2.13
GTF3C4-202ENST00000483873 PI4K2AQ9BTU6 479 aa28.38■■■□□ 2.13
GTF3C4-202ENST00000483873 ARMCX3Q9UH62 379 aaPredicted RBP28.38■■■□□ 2.13
GTF3C4-202ENST00000483873 LRRN2O75325 713 aa28.37■■■□□ 2.13
GTF3C4-202ENST00000483873 SOAT2O75908 522 aa28.37■■■□□ 2.13
GTF3C4-202ENST00000483873 POU2F2P09086 479 aa28.37■■■□□ 2.13
GTF3C4-202ENST00000483873 RAP1GAPP47736 663 aa28.37■■■□□ 2.13
GTF3C4-202ENST00000483873 TSPY1Q01534 308 aa28.37■■■□□ 2.13
GTF3C4-202ENST00000483873 DPCR1Q3MIW9 517 aa28.37■■■□□ 2.13
GTF3C4-202ENST00000483873 INTS6LQ5JSJ4 861 aaKnown RBP28.37■■■□□ 2.13
GTF3C4-202ENST00000483873 PKMYT1Q99640 499 aa28.37■■■□□ 2.13
GTF3C4-202ENST00000483873 DNMT3BQ9UBC3 853 aaKnown RBP28.37■■■□□ 2.13
GTF3C4-202ENST00000483873 N4BP1O75113 896 aaKnown RBP28.36■■■□□ 2.13
GTF3C4-202ENST00000483873 ASS1P00966 412 aaKnown RBP28.36■■■□□ 2.13
GTF3C4-202ENST00000483873 MXI1P50539 228 aa28.36■■■□□ 2.13
GTF3C4-202ENST00000483873 CDH8P55286 799 aa28.36■■■□□ 2.13
GTF3C4-202ENST00000483873 SGSM1Q2NKQ1 1148 aa28.36■■■□□ 2.13
GTF3C4-202ENST00000483873 DCP1BQ8IZD4 617 aaKnown RBP28.36■■■□□ 2.13
GTF3C4-202ENST00000483873 MLKLQ8NB16 471 aa28.36■■■□□ 2.13
GTF3C4-202ENST00000483873 SDCBP2Q9H190 292 aa28.36■■■□□ 2.13
GTF3C4-202ENST00000483873 ABI2Q9NYB9 513 aaPredicted RBP28.36■■■□□ 2.13
GTF3C4-202ENST00000483873 NR2E1Q9Y466 385 aa28.36■■■□□ 2.13
GTF3C4-202ENST00000483873 PTPRDP23468 1912 aa28.36■■■□□ 2.13
GTF3C4-202ENST00000483873 ATP2C2O75185 946 aa28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 TACC1O75410 805 aa28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 PDGFRBP09619 1106 aa28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 GTF2H1P32780 548 aa28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 PSMC1P62191 440 aaKnown RBP28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 CCDC40Q4G0X9 1142 aa28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 CBWD6Q4V339 395 aa28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 CBWD3Q5JTY5 395 aa28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 CBWD5Q5RIA9 395 aa28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 KRT39Q6A163 491 aa28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 SYT15Q9BQS2 421 aa28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 CEP72Q9P209 647 aa28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 RWDD2AQ9UIY3 292 aa28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 GTF3C4Q9UKN8 822 aa28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 PCSK1P29120 753 aa28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 NLRP12P59046 1061 aa28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 GET4Q7L5D6 327 aaPredicted RBP28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 FRMD5Q7Z6J6 570 aa28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 TDRD5Q8NAT2 981 aaKnown RBP28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 OR6B3Q8NGW1 331 aa28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 SEMA4DQ92854 862 aa28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 SLC35C1Q96A29 364 aa28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 SRRTQ9BXP5 876 aaKnown RBP28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 SNX25Q9H3E2 840 aa28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 APOBEC3GQ9HC16 384 aaKnown RBP28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 TMEM63CQ9P1W3 806 aa28.35■■■□□ 2.13
GTF3C4-202ENST00000483873 MYBPHLA2RUH7 354 aa28.34■■■□□ 2.13
GTF3C4-202ENST00000483873 KLHL40Q2TBA0 621 aa28.34■■■□□ 2.13
GTF3C4-202ENST00000483873 RNF135Q8IUD6 432 aa28.34■■■□□ 2.13
GTF3C4-202ENST00000483873 TAF4BQ92750 862 aa28.34■■■□□ 2.13
GTF3C4-202ENST00000483873 MYADMQ96S97 322 aa28.34■■■□□ 2.13
GTF3C4-202ENST00000483873 SEPT5Q99719 369 aaPredicted RBP28.34■■■□□ 2.13
GTF3C4-202ENST00000483873 DNAJC25Q9H1X3 360 aa28.34■■■□□ 2.13
GTF3C4-202ENST00000483873 METTL14Q9HCE5 456 aaKnown RBP28.34■■■□□ 2.13
GTF3C4-202ENST00000483873 CRTAC1Q9NQ79 661 aa28.34■■■□□ 2.13
GTF3C4-202ENST00000483873 USTQ9Y2C2 406 aa28.34■■■□□ 2.13
GTF3C4-202ENST00000483873 MYO10Q9HD67 2058 aa28.34■■■□□ 2.13
GTF3C4-202ENST00000483873 STX10O60499 249 aa28.33■■■□□ 2.13
GTF3C4-202ENST00000483873 FSHRP23945 695 aa28.33■■■□□ 2.13
GTF3C4-202ENST00000483873 GNL1P36915 607 aaPredicted RBP28.33■■■□□ 2.13
GTF3C4-202ENST00000483873 NOP14P78316 857 aaKnown RBP28.33■■■□□ 2.13
GTF3C4-202ENST00000483873 MGAT5BQ3V5L5 792 aa28.33■■■□□ 2.13
GTF3C4-202ENST00000483873 PABPC1LQ4VXU2 614 aaKnown RBP28.33■■■□□ 2.13
GTF3C4-202ENST00000483873 RBM43Q6ZSC3 357 aaKnown RBP28.33■■■□□ 2.13
GTF3C4-202ENST00000483873 ITFG1Q8TB96 612 aa28.33■■■□□ 2.13
GTF3C4-202ENST00000483873 SPPL2BQ8TCT7 592 aa28.33■■■□□ 2.13
GTF3C4-202ENST00000483873 C2orf15Q8WU43 125 aaKnown RBP28.33■■■□□ 2.13
GTF3C4-202ENST00000483873 LPIN3Q9BQK8 851 aa28.33■■■□□ 2.13
GTF3C4-202ENST00000483873 CORO1BQ9BR76 489 aa28.33■■■□□ 2.13
GTF3C4-202ENST00000483873 DPEP3Q9H4B8 488 aa28.33■■■□□ 2.13
GTF3C4-202ENST00000483873 CDH9Q9ULB4 789 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms