RNA–Protein interactions for RNA: ENST00000483713.5

POLR2F-209, Transcript of RNA polymerase II subunit F, humanhuman

TSL 3

Gene POLR2F, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-209ENST00000483713 TIMM13Q9Y5L4 95 aaPredicted RBP16.91■□□□□ 0.3
POLR2F-209ENST00000483713 BZW2Q9Y6E2 419 aaKnown RBP16.91■□□□□ 0.3
POLR2F-209ENST00000483713 PLXNA4Q9HCM2 1894 aa16.9■□□□□ 0.3
POLR2F-209ENST00000483713 OR6C75A6NL08 312 aa16.9■□□□□ 0.3
POLR2F-209ENST00000483713 CYP26A1O43174 497 aa16.9■□□□□ 0.3
POLR2F-209ENST00000483713 ARHGEF15O94989 841 aa16.9■□□□□ 0.3
POLR2F-209ENST00000483713 URODP06132 367 aa16.9■□□□□ 0.3
POLR2F-209ENST00000483713 PNMA6AP0CW24 399 aaPredicted RBP16.9■□□□□ 0.3
POLR2F-209ENST00000483713 PRKCIP41743 596 aa16.9■□□□□ 0.3
POLR2F-209ENST00000483713 PDE6CP51160 858 aa16.9■□□□□ 0.3
POLR2F-209ENST00000483713 TSPY1Q01534 308 aa16.9■□□□□ 0.3
POLR2F-209ENST00000483713 CREMQ03060 361 aa16.9■□□□□ 0.3
POLR2F-209ENST00000483713 MEA1Q16626 185 aa16.9■□□□□ 0.3
POLR2F-209ENST00000483713 RTP2Q5QGT7 225 aa16.9■□□□□ 0.3
POLR2F-209ENST00000483713 PPP2R2DQ66LE6 453 aa16.9■□□□□ 0.3
POLR2F-209ENST00000483713 CEP57Q86XR8 500 aa16.9■□□□□ 0.3
POLR2F-209ENST00000483713 CRYBG2Q8N1P7 616 aa16.9■□□□□ 0.3
POLR2F-209ENST00000483713 SLC4A11Q8NBS3 891 aa16.9■□□□□ 0.3
POLR2F-209ENST00000483713 ELOVL4Q9GZR5 314 aa16.9■□□□□ 0.3
POLR2F-209ENST00000483713 NKX2-4Q9H2Z4 354 aa16.9■□□□□ 0.3
POLR2F-209ENST00000483713 SLC28A3Q9HAS3 691 aa16.9■□□□□ 0.3
POLR2F-209ENST00000483713 HMGXB4Q9UGU5 601 aa16.9■□□□□ 0.3
POLR2F-209ENST00000483713 BACE2Q9Y5Z0 518 aa16.9■□□□□ 0.3
POLR2F-209ENST00000483713 SERPING1P05155 500 aa16.89■□□□□ 0.29
POLR2F-209ENST00000483713 PTMAP06454 111 aaKnown RBP16.89■□□□□ 0.29
POLR2F-209ENST00000483713 DNAJB2P25686 324 aa16.89■□□□□ 0.29
POLR2F-209ENST00000483713 GNA15P30679 374 aa16.89■□□□□ 0.29
POLR2F-209ENST00000483713 CLCN1P35523 988 aa16.89■□□□□ 0.29
POLR2F-209ENST00000483713 CDK17Q00537 523 aa16.89■□□□□ 0.29
POLR2F-209ENST00000483713 STILQ15468 1287 aa16.89■□□□□ 0.29
POLR2F-209ENST00000483713 MAPRE1Q15691 268 aaKnown RBP16.89■□□□□ 0.29
POLR2F-209ENST00000483713 LRIT3Q3SXY7 679 aa16.89■□□□□ 0.29
POLR2F-209ENST00000483713 CTXN3Q4LDR2 81 aa16.89■□□□□ 0.29
POLR2F-209ENST00000483713 ZNF394Q53GI3 561 aa16.89■□□□□ 0.29
POLR2F-209ENST00000483713 E4F1Q66K89 784 aaPredicted RBP16.89■□□□□ 0.29
POLR2F-209ENST00000483713 CCDC186Q7Z3E2 898 aa16.89■□□□□ 0.29
POLR2F-209ENST00000483713 IRF2BP2Q7Z5L9 587 aa16.89■□□□□ 0.29
POLR2F-209ENST00000483713 ZNF677Q86XU0 584 aa16.89■□□□□ 0.29
POLR2F-209ENST00000483713 VPS52Q8N1B4 723 aa16.89■□□□□ 0.29
POLR2F-209ENST00000483713 B3GALNT2Q8NCR0 500 aa16.89■□□□□ 0.29
POLR2F-209ENST00000483713 FBXO22Q8NEZ5 403 aa16.89■□□□□ 0.29
POLR2F-209ENST00000483713 TIFAQ96CG3 184 aa16.89■□□□□ 0.29
POLR2F-209ENST00000483713 TWNKQ96RR1 684 aa16.89■□□□□ 0.29
POLR2F-209ENST00000483713 RTP3Q9BQQ7 232 aa16.89■□□□□ 0.29
POLR2F-209ENST00000483713 SYT15Q9BQS2 421 aa16.89■□□□□ 0.29
POLR2F-209ENST00000483713 ZBP1Q9H171 429 aa16.89■□□□□ 0.29
POLR2F-209ENST00000483713 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.89■□□□□ 0.299e-7■■■□□ 17.4
POLR2F-209ENST00000483713 MTRRQ9UBK8 725 aa16.89■□□□□ 0.29
POLR2F-209ENST00000483713 RANBP2P49792 3224 aaKnown RBP16.88■□□□□ 0.29
POLR2F-209ENST00000483713 MED7O43513 233 aa16.88■□□□□ 0.29
POLR2F-209ENST00000483713 PDGFRBP09619 1106 aa16.88■□□□□ 0.29
POLR2F-209ENST00000483713 CTSAP10619 480 aa16.88■□□□□ 0.29
POLR2F-209ENST00000483713 VDRP11473 427 aa16.88■□□□□ 0.29
POLR2F-209ENST00000483713 CYP11B1P15538 503 aa16.88■□□□□ 0.29
POLR2F-209ENST00000483713 FECHP22830 423 aa16.88■□□□□ 0.29
POLR2F-209ENST00000483713 LMO2P25791 158 aa16.88■□□□□ 0.29
POLR2F-209ENST00000483713 ANXA13P27216 316 aa16.88■□□□□ 0.29
POLR2F-209ENST00000483713 ARID5AQ03989 594 aa16.88■□□□□ 0.29
POLR2F-209ENST00000483713 GOLGA8FQ08AF8 430 aa16.88■□□□□ 0.29
POLR2F-209ENST00000483713 GOLGA8DPQ0D2H9 430 aa16.88■□□□□ 0.29
POLR2F-209ENST00000483713 KLHL30Q0D2K2 578 aa16.88■□□□□ 0.29
POLR2F-209ENST00000483713 PSMD5Q16401 504 aa16.88■□□□□ 0.29
POLR2F-209ENST00000483713 INTS6LQ5JSJ4 861 aaKnown RBP16.88■□□□□ 0.29
POLR2F-209ENST00000483713 KIAA0319Q5VV43 1072 aa16.88■□□□□ 0.29
POLR2F-209ENST00000483713 TAS1R1Q7RTX1 841 aa16.88■□□□□ 0.29
POLR2F-209ENST00000483713 ACOT1Q86TX2 421 aa16.88■□□□□ 0.29
POLR2F-209ENST00000483713 SLC47A2Q86VL8 602 aa16.88■□□□□ 0.29
POLR2F-209ENST00000483713 CCDC112Q8NEF3 446 aa16.88■□□□□ 0.29
POLR2F-209ENST00000483713 LNX1Q8TBB1 728 aaPredicted RBP16.88■□□□□ 0.29
POLR2F-209ENST00000483713 EPS8L1Q8TE68 723 aa16.88■□□□□ 0.29
POLR2F-209ENST00000483713 RIN2Q8WYP3 895 aaPredicted RBP16.88■□□□□ 0.29
POLR2F-209ENST00000483713 B3GALT6Q96L58 329 aa16.88■□□□□ 0.29
POLR2F-209ENST00000483713 HEXIM2Q96MH2 286 aaKnown RBP16.88■□□□□ 0.29
POLR2F-209ENST00000483713 MRPL17Q9NRX2 175 aaKnown RBP16.88■□□□□ 0.29
POLR2F-209ENST00000483713 NME7Q9Y5B8 376 aa16.88■□□□□ 0.29
POLR2F-209ENST00000483713 LAMA2P24043 3122 aaKnown RBP16.88■□□□□ 0.29
POLR2F-209ENST00000483713 H3BNC9 293 aa16.87■□□□□ 0.29
POLR2F-209ENST00000483713 NRDCO43847 1150 aa16.87■□□□□ 0.29
POLR2F-209ENST00000483713 TBC1D4O60343 1298 aa16.87■□□□□ 0.29
POLR2F-209ENST00000483713 CD19P15391 556 aa16.87■□□□□ 0.29
POLR2F-209ENST00000483713 PTPN1P18031 435 aaKnown RBP16.87■□□□□ 0.29
POLR2F-209ENST00000483713 ACAT1P24752 427 aaKnown RBP16.87■□□□□ 0.29
POLR2F-209ENST00000483713 SMARCB1Q12824 385 aa16.87■□□□□ 0.29
POLR2F-209ENST00000483713 SGO2Q562F6 1265 aa16.87■□□□□ 0.29
POLR2F-209ENST00000483713 TDRD12Q587J7 1177 aaKnown RBP16.87■□□□□ 0.29
POLR2F-209ENST00000483713 ARHGAP17Q68EM7 881 aa16.87■□□□□ 0.29
POLR2F-209ENST00000483713 PDE12Q6L8Q7 609 aaKnown RBP16.87■□□□□ 0.29
POLR2F-209ENST00000483713 WDR59Q6PJI9 974 aa16.87■□□□□ 0.29
POLR2F-209ENST00000483713 DCP1BQ8IZD4 617 aaKnown RBP16.87■□□□□ 0.29
POLR2F-209ENST00000483713 OR10T2Q8NGX3 314 aa16.87■□□□□ 0.29
POLR2F-209ENST00000483713 SPPL3Q8TCT6 385 aa16.87■□□□□ 0.29
POLR2F-209ENST00000483713 ZCWPW1Q9H0M4 648 aa16.87■□□□□ 0.29
POLR2F-209ENST00000483713 DPEP3Q9H4B8 488 aa16.87■□□□□ 0.29
POLR2F-209ENST00000483713 TLR9Q9NR96 1032 aa16.87■□□□□ 0.29
POLR2F-209ENST00000483713 NOCTQ9UK39 431 aaKnown RBP16.87■□□□□ 0.29
POLR2F-209ENST00000483713 MTUS1Q9ULD2 1270 aa16.87■□□□□ 0.29
POLR2F-209ENST00000483713 SSU72P8A0A1W2PR75 194 aa16.86■□□□□ 0.29
POLR2F-209ENST00000483713 THAP12O43422 761 aa16.86■□□□□ 0.29
POLR2F-209ENST00000483713 PSMC1P62191 440 aaKnown RBP16.86■□□□□ 0.29
POLR2F-209ENST00000483713 CDR2Q01850 454 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms