RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 DCNP07585 359 aaKnown RBP13□□□□□ -0.33
HDLBP-239ENST00000483086 CD72P21854 359 aa13□□□□□ -0.33
HDLBP-239ENST00000483086 KRT85P78386 507 aa13□□□□□ -0.33
HDLBP-239ENST00000483086 CYP24A1Q07973 514 aa13□□□□□ -0.33
HDLBP-239ENST00000483086 BFSP1Q12934 665 aa13□□□□□ -0.33
HDLBP-239ENST00000483086 SNW1Q13573 536 aaKnown RBP13□□□□□ -0.33
HDLBP-239ENST00000483086 GRM2Q14416 872 aa13□□□□□ -0.33
HDLBP-239ENST00000483086 SNRNP35Q16560 246 aaKnown RBP13□□□□□ -0.33
HDLBP-239ENST00000483086 SDHAF4Q5VUM1 108 aa13□□□□□ -0.33
HDLBP-239ENST00000483086 DNAJB7Q7Z6W7 309 aaPredicted RBP13□□□□□ -0.33
HDLBP-239ENST00000483086 TMEM150AQ86TG1 271 aa13□□□□□ -0.33
HDLBP-239ENST00000483086 LRRC52Q8N7C0 313 aa13□□□□□ -0.33
HDLBP-239ENST00000483086 GIPC2Q8TF65 315 aa13□□□□□ -0.33
HDLBP-239ENST00000483086 PSMG2Q969U7 264 aa13□□□□□ -0.33
HDLBP-239ENST00000483086 ZNF512Q96ME7 567 aaPredicted RBP13□□□□□ -0.33
HDLBP-239ENST00000483086 ZNF560Q96MR9 790 aa13□□□□□ -0.33
HDLBP-239ENST00000483086 DDX23Q9BUQ8 820 aaKnown RBP13□□□□□ -0.33
HDLBP-239ENST00000483086 OXCT2Q9BYC2 517 aaPredicted RBP13□□□□□ -0.33
HDLBP-239ENST00000483086 KCTD10Q9H3F6 313 aa13□□□□□ -0.33
HDLBP-239ENST00000483086 MFSD1Q9H3U5 465 aa13□□□□□ -0.33
HDLBP-239ENST00000483086 GDAP2Q9NXN4 497 aa13□□□□□ -0.33
HDLBP-239ENST00000483086 ITGA11Q9UKX5 1188 aa13□□□□□ -0.33
HDLBP-239ENST00000483086 SNX9Q9Y5X1 595 aa13□□□□□ -0.33
HDLBP-239ENST00000483086 ZNF292O60281 2723 aa13□□□□□ -0.33
HDLBP-239ENST00000483086 DNAH14Q0VDD8 3507 aa13□□□□□ -0.33
HDLBP-239ENST00000483086 RIF1Q5UIP0 2472 aaKnown RBP12.99□□□□□ -0.33
HDLBP-239ENST00000483086 GABRDO14764 452 aa12.99□□□□□ -0.33
HDLBP-239ENST00000483086 ECI2O75521 394 aa12.99□□□□□ -0.33
HDLBP-239ENST00000483086 MICAL2O94851 1124 aa12.99□□□□□ -0.33
HDLBP-239ENST00000483086 KRT19P08727 400 aa12.99□□□□□ -0.33
HDLBP-239ENST00000483086 TMEM191BP0C7N4 346 aa12.99□□□□□ -0.33
HDLBP-239ENST00000483086 HAPLN1P10915 354 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-239ENST00000483086 HMGA1P17096 107 aaKnown RBP12.99□□□□□ -0.33
HDLBP-239ENST00000483086 LMO2P25791 158 aa12.99□□□□□ -0.33
HDLBP-239ENST00000483086 PTPN5P54829 565 aa12.99□□□□□ -0.33
HDLBP-239ENST00000483086 PSMD6Q15008 389 aa12.99□□□□□ -0.33
HDLBP-239ENST00000483086 KNOP1Q1ED39 458 aaKnown RBP12.99□□□□□ -0.33
HDLBP-239ENST00000483086 MTSS1LQ765P7 747 aa12.99□□□□□ -0.33
HDLBP-239ENST00000483086 TRAPPC11Q7Z392 1133 aa12.99□□□□□ -0.33
HDLBP-239ENST00000483086 C12orf56Q8IXR9 622 aa12.99□□□□□ -0.33
HDLBP-239ENST00000483086 RIN3Q8TB24 985 aa12.99□□□□□ -0.33
HDLBP-239ENST00000483086 ZSCAN18Q8TBC5 510 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-239ENST00000483086 ELSPBP1Q96BH3 223 aa12.99□□□□□ -0.33
HDLBP-239ENST00000483086 SEPT5Q99719 369 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-239ENST00000483086 ASAH2Q9NR71 780 aa12.99□□□□□ -0.33
HDLBP-239ENST00000483086 DMAC2Q9NW81 257 aa12.99□□□□□ -0.33
HDLBP-239ENST00000483086 DDX43Q9NXZ2 648 aaKnown RBP12.99□□□□□ -0.33
HDLBP-239ENST00000483086 ABI2Q9NYB9 513 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-239ENST00000483086 DSEQ9UL01 958 aa12.99□□□□□ -0.33
HDLBP-239ENST00000483086 ATG2BQ96BY7 2078 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 MYH10P35580 1976 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 MYBPHLA2RUH7 354 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 ARNTLO00327 626 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 KIAA0391O15091 583 aaKnown RBP12.98□□□□□ -0.33
HDLBP-239ENST00000483086 TADA3O75528 432 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 PRAMEF12O95522 483 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 DLATP10515 647 aaKnown RBP12.98□□□□□ -0.33
HDLBP-239ENST00000483086 PAX3P23760 479 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 PNPLA4P41247 253 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 MRE11P49959 708 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 STARD6P59095 220 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 DLG4P78352 724 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 RBP5P82980 135 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 CYP4F8P98187 520 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 DPYDQ12882 1025 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 FZD5Q13467 585 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 MGAT5BQ3V5L5 792 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 SLC44A4Q53GD3 710 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 INTS6LQ5JSJ4 861 aaKnown RBP12.98□□□□□ -0.33
HDLBP-239ENST00000483086 C1orf220Q5T0J3 134 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 CYP4A22Q5TCH4 519 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 IQCEQ6IPM2 695 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 STXBP4Q6ZWJ1 553 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 WDR49Q8IV35 697 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 CCDC105Q8IYK2 499 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 CEP57L1Q8IYX8 460 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 ZNF687Q8N1G0 1237 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 FSIP1Q8NA03 581 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 XXYLT1Q8NBI6 393 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 CACTINQ8WUQ7 758 aaKnown RBP12.98□□□□□ -0.33
HDLBP-239ENST00000483086 CCDC127Q96BQ5 260 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 HPDLQ96IR7 371 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 CGRRF1Q99675 332 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 MRPL45Q9BRJ2 306 aaKnown RBP12.98□□□□□ -0.33
HDLBP-239ENST00000483086 PI4K2AQ9BTU6 479 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 HEBP1Q9NRV9 189 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 GTF3C4Q9UKN8 822 aa12.98□□□□□ -0.33
HDLBP-239ENST00000483086 MYO16Q9Y6X6 1858 aa12.97□□□□□ -0.33
HDLBP-239ENST00000483086 LRRIQ3A6PVS8 624 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-239ENST00000483086 ZNF197O14709 1029 aa12.97□□□□□ -0.33
HDLBP-239ENST00000483086 VNN1O95497 513 aa12.97□□□□□ -0.33
HDLBP-239ENST00000483086 CYP2F1P24903 491 aa12.97□□□□□ -0.33
HDLBP-239ENST00000483086 GABRR2P28476 465 aa12.97□□□□□ -0.33
HDLBP-239ENST00000483086 SYKP43405 635 aa12.97□□□□□ -0.33
HDLBP-239ENST00000483086 EPHB3P54753 998 aa12.97□□□□□ -0.33
HDLBP-239ENST00000483086 PSMC1P62191 440 aaKnown RBP12.97□□□□□ -0.33
HDLBP-239ENST00000483086 MLF2Q15773 248 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-239ENST00000483086 DDR2Q16832 855 aa12.97□□□□□ -0.33
HDLBP-239ENST00000483086 DUOXA2Q1HG44 320 aa12.97□□□□□ -0.33
HDLBP-239ENST00000483086 WDR44Q5JSH3 913 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms