RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 SLC46A1Q96NT5 459 aa6.98□□□□□ -1.29
SF3B1-210ENST00000482158 MESP1Q9BRJ9 268 aa6.98□□□□□ -1.29
SF3B1-210ENST00000482158 CHST8Q9H2A9 424 aa6.98□□□□□ -1.29
SF3B1-210ENST00000482158 AKIP1Q9NQ31 210 aa6.98□□□□□ -1.29
SF3B1-210ENST00000482158 A1CFQ9NQ94 594 aaKnown RBP6.98□□□□□ -1.29
SF3B1-210ENST00000482158 RGS17Q9UGC6 210 aaPredicted RBP6.98□□□□□ -1.29
SF3B1-210ENST00000482158 KCNE5Q9UJ90 142 aa6.98□□□□□ -1.29
SF3B1-210ENST00000482158 DMTF1Q9Y222 760 aa6.98□□□□□ -1.29
SF3B1-210ENST00000482158 TSC22D4Q9Y3Q8 395 aa6.98□□□□□ -1.29
SF3B1-210ENST00000482158 A0A1W2PPC4 97 aa6.97□□□□□ -1.29
SF3B1-210ENST00000482158 MBD3L4A6NDZ8 208 aaPredicted RBP6.97□□□□□ -1.29
SF3B1-210ENST00000482158 MBD3L3A6NE82 208 aaPredicted RBP6.97□□□□□ -1.29
SF3B1-210ENST00000482158 MT-ND5P03915 603 aa6.97□□□□□ -1.29
SF3B1-210ENST00000482158 MXRA7P84157 204 aa6.97□□□□□ -1.29
SF3B1-210ENST00000482158 CYP2A13Q16696 494 aa6.97□□□□□ -1.29
SF3B1-210ENST00000482158 BEAN1Q3B7T3 259 aa6.97□□□□□ -1.29
SF3B1-210ENST00000482158 LONRF3Q496Y0 759 aa6.97□□□□□ -1.29
SF3B1-210ENST00000482158 AMOTQ4VCS5 1084 aa6.97□□□□□ -1.29
SF3B1-210ENST00000482158 IZUMO3Q5VZ72 239 aa6.97□□□□□ -1.29
SF3B1-210ENST00000482158 ERICH6BQ5W0A0 696 aa6.97□□□□□ -1.29
SF3B1-210ENST00000482158 ZDHHC24Q6UX98 284 aa6.97□□□□□ -1.29
SF3B1-210ENST00000482158 C1orf210Q8IVY1 113 aa6.97□□□□□ -1.29
SF3B1-210ENST00000482158 MPP5Q8N3R9 675 aa6.97□□□□□ -1.29
SF3B1-210ENST00000482158 ATP11CQ8NB49 1132 aa6.97□□□□□ -1.29
SF3B1-210ENST00000482158 SNX22Q96L94 193 aa6.97□□□□□ -1.29
SF3B1-210ENST00000482158 ADAM2Q99965 735 aa6.97□□□□□ -1.29
SF3B1-210ENST00000482158 GJB4Q9NTQ9 266 aa6.97□□□□□ -1.29
SF3B1-210ENST00000482158 PADI4Q9UM07 663 aa6.97□□□□□ -1.29
SF3B1-210ENST00000482158 TBC1D30Q9Y2I9 924 aa6.97□□□□□ -1.29
SF3B1-210ENST00000482158 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.96□□□□□ -1.3
SF3B1-210ENST00000482158 ABHD14A-ACY1A0A1B0GW23 586 aa6.96□□□□□ -1.3
SF3B1-210ENST00000482158 GAGE12BA1L429 117 aa6.96□□□□□ -1.3
SF3B1-210ENST00000482158 GAGE12HA6NDE8 117 aa6.96□□□□□ -1.3
SF3B1-210ENST00000482158 SPATA31D3P0C874 917 aa6.96□□□□□ -1.3
SF3B1-210ENST00000482158 KLRC1P26715 233 aa6.96□□□□□ -1.3
SF3B1-210ENST00000482158 ZNF134P52741 427 aa6.96□□□□□ -1.3
SF3B1-210ENST00000482158 WNT3P56703 355 aa6.96□□□□□ -1.3
SF3B1-210ENST00000482158 CXADRP78310 365 aa6.96□□□□□ -1.3
SF3B1-210ENST00000482158 OS9Q13438 667 aaPredicted RBP6.96□□□□□ -1.3
SF3B1-210ENST00000482158 C10orf62Q5T681 223 aaPredicted RBP6.96□□□□□ -1.3
SF3B1-210ENST00000482158 SPATA31D4Q6ZUB0 917 aa6.96□□□□□ -1.3
SF3B1-210ENST00000482158 UNC13DQ70J99 1090 aa6.96□□□□□ -1.3
SF3B1-210ENST00000482158 GAS2L3Q86XJ1 694 aa6.96□□□□□ -1.3
SF3B1-210ENST00000482158 CCDC33Q8N5R6 958 aa6.96□□□□□ -1.3
SF3B1-210ENST00000482158 BRI3BPQ8WY22 251 aa6.96□□□□□ -1.3
SF3B1-210ENST00000482158 HEPHQ9BQS7 1158 aa6.96□□□□□ -1.3
SF3B1-210ENST00000482158 TTYH3Q9C0H2 523 aa6.96□□□□□ -1.3
SF3B1-210ENST00000482158 MS4A7Q9GZW8 240 aaPredicted RBP6.96□□□□□ -1.3
SF3B1-210ENST00000482158 GPRC5BQ9NZH0 403 aa6.96□□□□□ -1.3
SF3B1-210ENST00000482158 MYO1AQ9UBC5 1043 aa6.96□□□□□ -1.3
SF3B1-210ENST00000482158 PAXBP1Q9Y5B6 917 aa6.96□□□□□ -1.3
SF3B1-210ENST00000482158 A0A1W2PS29 197 aa6.95□□□□□ -1.3
SF3B1-210ENST00000482158 E7ENX8 843 aa6.95□□□□□ -1.3
SF3B1-210ENST00000482158 MYO1CO00159 1063 aa6.95□□□□□ -1.3
SF3B1-210ENST00000482158 RNASET2O00584 256 aaKnown RBP6.95□□□□□ -1.3
SF3B1-210ENST00000482158 APOL1O14791 398 aa6.95□□□□□ -1.3
SF3B1-210ENST00000482158 FGF18O76093 207 aa6.95□□□□□ -1.3
SF3B1-210ENST00000482158 C1SP09871 688 aa6.95□□□□□ -1.3
SF3B1-210ENST00000482158 SETSIPP0DME0 302 aa6.95□□□□□ -1.3
SF3B1-210ENST00000482158 TXNP10599 105 aaKnown RBP6.95□□□□□ -1.3
SF3B1-210ENST00000482158 FGFR2P21802 821 aa6.95□□□□□ -1.3
SF3B1-210ENST00000482158 GCLCP48506 637 aaPredicted RBP6.95□□□□□ -1.3
SF3B1-210ENST00000482158 ANXA11P50995 505 aaKnown RBP6.95□□□□□ -1.3
SF3B1-210ENST00000482158 TAP2Q03519 686 aa6.95□□□□□ -1.3
SF3B1-210ENST00000482158 PMS2P11Q13670 270 aa6.95□□□□□ -1.3
SF3B1-210ENST00000482158 SLC44A4Q53GD3 710 aa6.95□□□□□ -1.3
SF3B1-210ENST00000482158 DGKKQ5KSL6 1271 aa6.95□□□□□ -1.3
SF3B1-210ENST00000482158 FOXR2Q6PJQ5 311 aa6.95□□□□□ -1.3
SF3B1-210ENST00000482158 ZNF280BQ86YH2 543 aa6.95□□□□□ -1.3
SF3B1-210ENST00000482158 RAPGEF4Q8WZA2 1011 aa6.95□□□□□ -1.3
SF3B1-210ENST00000482158 CDK5RAP1Q96SZ6 601 aaKnown RBP6.95□□□□□ -1.3
SF3B1-210ENST00000482158 ARPC5LQ9BPX5 153 aa6.95□□□□□ -1.3
SF3B1-210ENST00000482158 STK31Q9BXU1 1019 aa6.95□□□□□ -1.3
SF3B1-210ENST00000482158 CERS4Q9HA82 394 aa6.95□□□□□ -1.3
SF3B1-210ENST00000482158 PLCB1Q9NQ66 1216 aa6.95□□□□□ -1.3
SF3B1-210ENST00000482158 TMEM74BQ9NUR3 256 aa6.95□□□□□ -1.3
SF3B1-210ENST00000482158 RAD54BQ9Y620 910 aa6.95□□□□□ -1.3
SF3B1-210ENST00000482158 PRAMEF33A0A0G2JMD5 474 aa6.94□□□□□ -1.3
SF3B1-210ENST00000482158 TPD52L2O43399 206 aaKnown RBP6.94□□□□□ -1.3
SF3B1-210ENST00000482158 PRAMEF10O60809 474 aa6.94□□□□□ -1.3
SF3B1-210ENST00000482158 ANXA2P07355 339 aaKnown RBP6.94□□□□□ -1.3
SF3B1-210ENST00000482158 HARSP12081 509 aaKnown RBP6.94□□□□□ -1.3
SF3B1-210ENST00000482158 ABCB4P21439 1286 aa6.94□□□□□ -1.3
SF3B1-210ENST00000482158 RESTQ13127 1097 aa6.94□□□□□ -1.3
SF3B1-210ENST00000482158 DYRK1AQ13627 763 aa6.94□□□□□ -1.3
SF3B1-210ENST00000482158 IQCB1Q15051 598 aa6.94□□□□□ -1.3
SF3B1-210ENST00000482158 GEN1Q17RS7 908 aa6.94□□□□□ -1.3
SF3B1-210ENST00000482158 ZIK1Q3SY52 487 aaPredicted RBP6.94□□□□□ -1.3
SF3B1-210ENST00000482158 CD300EQ496F6 205 aaPredicted RBP6.94□□□□□ -1.3
SF3B1-210ENST00000482158 RNF207Q6ZRF8 634 aa6.94□□□□□ -1.3
SF3B1-210ENST00000482158 ZNF276Q8N554 614 aa6.94□□□□□ -1.3
SF3B1-210ENST00000482158 CACTINQ8WUQ7 758 aaKnown RBP6.94□□□□□ -1.3
SF3B1-210ENST00000482158 SPSB4Q96A44 273 aa6.94□□□□□ -1.3
SF3B1-210ENST00000482158 BOD1Q96IK1 185 aa6.94□□□□□ -1.3
SF3B1-210ENST00000482158 AS3MTQ9HBK9 375 aa6.94□□□□□ -1.3
SF3B1-210ENST00000482158 PARPBPQ9NWS1 579 aa6.94□□□□□ -1.3
SF3B1-210ENST00000482158 RNF181Q9P0P0 153 aa6.94□□□□□ -1.3
SF3B1-210ENST00000482158 MTO1Q9Y2Z2 717 aaKnown RBP6.94□□□□□ -1.3
SF3B1-210ENST00000482158 NEU2Q9Y3R4 380 aa6.94□□□□□ -1.3
SF3B1-210ENST00000482158 ERN1O75460 977 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms