RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 HEXIM2Q96MH2 286 aaKnown RBP12.41□□□□□ -0.42
GGPS1-205ENST00000482013 PPP1R10Q96QC0 940 aaKnown RBP12.41□□□□□ -0.42
GGPS1-205ENST00000482013 RHOXF2Q9BQY4 288 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 C11orf70Q9BRQ4 267 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 APOL6Q9BWW8 343 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 RNF39Q9H2S5 420 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 TUBGCP4Q9UGJ1 667 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 IP6K2Q9UHH9 426 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 ANAPC7Q9UJX3 599 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 PHF24Q9UPV7 400 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.41□□□□□ -0.42
GGPS1-205ENST00000482013 SNX9Q9Y5X1 595 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 A0A0U1RQF3 1178 aa12.4□□□□□ -0.42
GGPS1-205ENST00000482013 TMEM191CA6NGB0 347 aa12.4□□□□□ -0.42
GGPS1-205ENST00000482013 KBTBD13C9JR72 458 aa12.4□□□□□ -0.42
GGPS1-205ENST00000482013 O00370 1275 aa12.4□□□□□ -0.42
GGPS1-205ENST00000482013 RPL9P32969 192 aaKnown RBP12.4□□□□□ -0.42
GGPS1-205ENST00000482013 CLCN6P51797 869 aa12.4□□□□□ -0.42
GGPS1-205ENST00000482013 RWDD2BP57060 319 aa12.4□□□□□ -0.42
GGPS1-205ENST00000482013 MAP9Q49MG5 647 aa12.4□□□□□ -0.42
GGPS1-205ENST00000482013 DENND1BQ6P3S1 775 aa12.4□□□□□ -0.42
GGPS1-205ENST00000482013 PASD1Q8IV76 773 aa12.4□□□□□ -0.42
GGPS1-205ENST00000482013 CRYBG2Q8N1P7 616 aa12.4□□□□□ -0.42
GGPS1-205ENST00000482013 TOP6BLQ8N6T0 577 aa12.4□□□□□ -0.42
GGPS1-205ENST00000482013 C1orf131Q8NDD1 294 aaKnown RBP12.4□□□□□ -0.42
GGPS1-205ENST00000482013 STK32AQ8WU08 396 aa12.4□□□□□ -0.42
GGPS1-205ENST00000482013 MAIP1Q8WWC4 291 aa12.4□□□□□ -0.42
GGPS1-205ENST00000482013 ARFGAP3Q9NP61 516 aa12.4□□□□□ -0.42
GGPS1-205ENST00000482013 RBM12Q9NTZ6 932 aaKnown RBP12.4□□□□□ -0.42
GGPS1-205ENST00000482013 PADI3Q9ULW8 664 aa12.4□□□□□ -0.42
GGPS1-205ENST00000482013 SIGLEC16A6NMB1 481 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 TMEM110-MUSTN1A8MSY1 372 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 ARVCFO00192 962 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 PTGESO14684 152 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 PSTPIP1O43586 416 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 MICAL2O94851 1124 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 MYCNP04198 464 aaPredicted RBP12.39□□□□□ -0.43
GGPS1-205ENST00000482013 THP07101 528 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 CTSHP09668 335 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 WARSP23381 471 aaKnown RBP12.39□□□□□ -0.43
GGPS1-205ENST00000482013 TNFRSF8P28908 595 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 GPD2P43304 727 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 PIGHQ14442 188 aaPredicted RBP12.39□□□□□ -0.43
GGPS1-205ENST00000482013 LPIN1Q14693 890 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 ACAP1Q15027 740 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 GLRA4Q5JXX5 417 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 PPP1R15BQ5SWA1 713 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 SEL1L2Q5TEA6 688 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 LRRC38Q5VT99 294 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 ARHGAP17Q68EM7 881 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 CC2D1AQ6P1N0 951 aaPredicted RBP12.39□□□□□ -0.43
GGPS1-205ENST00000482013 DNAJC24Q6P3W2 148 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 NIPA2Q8N8Q9 360 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 EIF1ADQ8N9N8 165 aaKnown RBP12.39□□□□□ -0.43
GGPS1-205ENST00000482013 APPL2Q8NEU8 664 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 SPATA18Q8TC71 538 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 FNIP1Q8TF40 1166 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 C18orf8Q96DM3 657 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 RNPC3Q96LT9 517 aaKnown RBP12.39□□□□□ -0.43
GGPS1-205ENST00000482013 RUNDC3BQ96NL0 473 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 TWNKQ96RR1 684 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 CXCL16Q9H2A7 254 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 SLITRK6Q9H5Y7 841 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 AGO3Q9H9G7 860 aaKnown RBP12.39□□□□□ -0.43
GGPS1-205ENST00000482013 KLK14Q9P0G3 267 aa12.39□□□□□ -0.43
GGPS1-205ENST00000482013 GOLGA6L10A0A0M3HER8 536 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 A0A1W2PQ45 241 aaPredicted RBP12.38□□□□□ -0.43
GGPS1-205ENST00000482013 A0A1W2PQY0 241 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 KRIT1O00522 736 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 PPEF2O14830 753 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 INPPL1O15357 1258 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 HUS1O60921 280 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 ZRANB2O95218 330 aaKnown RBP eCLIP12.38□□□□□ -0.43
GGPS1-205ENST00000482013 CKBP12277 381 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 CD52P31358 61 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 GNL1P36915 607 aaPredicted RBP12.38□□□□□ -0.43
GGPS1-205ENST00000482013 DNA2P51530 1060 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 LILRA4P59901 499 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 SOX4Q06945 474 aaPredicted RBP12.38□□□□□ -0.43
GGPS1-205ENST00000482013 LONRF2Q1L5Z9 754 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 SOWAHAQ2M3V2 549 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 ZNF618Q5T7W0 954 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 DCAF12L1Q5VU92 463 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 C8orf74Q6P047 294 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 RHOT1Q8IXI2 618 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 TMEM86AQ8N2M4 240 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 CCDC26Q8TAB7 109 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 IPO4Q8TEX9 1081 aaKnown RBP12.38□□□□□ -0.43
GGPS1-205ENST00000482013 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.38□□□□□ -0.43
GGPS1-205ENST00000482013 ALG3Q92685 438 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 DDX27Q96GQ7 796 aaKnown RBP12.38□□□□□ -0.43
GGPS1-205ENST00000482013 TNIP3Q96KP6 325 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 PNKPQ96T60 521 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 LRRC1Q9BTT6 524 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.38□□□□□ -0.43
GGPS1-205ENST00000482013 EPC1Q9H2F5 836 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 TSPYL2Q9H2G4 693 aaPredicted RBP12.38□□□□□ -0.43
GGPS1-205ENST00000482013 SNX25Q9H3E2 840 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 CYLDQ9NQC7 956 aa12.38□□□□□ -0.43
GGPS1-205ENST00000482013 STARD7Q9NQZ5 370 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms