RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 MYL1P05976 194 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 CFHP08603 1231 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 PDGFRBP09619 1106 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 MYL4P12829 197 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 FCARP24071 287 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 CDH8P55286 799 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 SNRPFP62306 86 aaKnown RBP12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 SIGLEC14Q08ET2 396 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 TDGQ13569 410 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 MTMR3Q13615 1198 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 TEAD2Q15562 447 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 SPOPLQ6IQ16 392 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 METTL23Q86XA0 190 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 SLC9A9Q8IVB4 645 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 ADGRF2Q8IZF7 708 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 PLCD3Q8N3E9 789 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 RSPRY1Q96DX4 576 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 FNBP1Q96RU3 617 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 PI4K2AQ9BTU6 479 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 DPEP3Q9H4B8 488 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 SMYD3Q9H7B4 428 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 KIAA1586Q9HCI6 787 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 CRTAC1Q9NQ79 661 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 MAN1B1Q9UKM7 699 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 GTF3C4Q9UKN8 822 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 CIZ1Q9ULV3 898 aaPredicted RBP12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 GABRDO14764 452 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 HUS1O60921 280 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 PTPN2P17706 415 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 NR2F2P24468 414 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 CYP2F1P24903 491 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 PLA2G5P39877 138 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 PNPLA4P41247 253 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 CLDN10P78369 228 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 PPP3CAQ08209 521 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 ORC1Q13415 861 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 MGAT5BQ3V5L5 792 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 INTS6LQ5JSJ4 861 aaKnown RBP12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 FAM78AQ5JUQ0 283 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 ZNF318Q5VUA4 2279 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 TANGO2Q6ICL3 276 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 SCARA5Q6ZMJ2 495 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 GAREM2Q75VX8 874 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 GUF1Q8N442 669 aaKnown RBP12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 TOP6BLQ8N6T0 577 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 SPATA20Q8TB22 786 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 PBXIP1Q96AQ6 731 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 TMEM30AQ9NV96 361 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 NXF1Q9UBU9 619 aaKnown RBP12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 DSEQ9UL01 958 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 DUSP12Q9UNI6 340 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 TRAF3IP3Q9Y228 551 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 WDR87Q6ZQQ6 2873 aa12.24□□□□□ -0.45
RAPGEF1-207ENST00000481260 A0A1W2PRU2 124 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 KRBA1A5PL33 1030 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 BIN1O00499 593 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 HAPLN1P10915 354 aaPredicted RBP12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 NPR3P17342 541 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 VIPR2P41587 438 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 CACNA2D1P54289 1103 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 EPHA5P54756 1037 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 GPC5P78333 572 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 CYP4F8P98187 520 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 BIRC3Q13489 604 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 SURF1Q15526 300 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 DDR2Q16832 855 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 ANKRD40Q6AI12 368 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 DNAJB7Q7Z6W7 309 aaPredicted RBP12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 THEM5Q8N1Q8 247 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 GOLGA5Q8TBA6 731 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 TMEM174Q8WUU8 243 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 LRRC3BQ96PB8 259 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 MMS19Q96T76 1030 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 MKNK1Q9BUB5 465 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 MMRN2Q9H8L6 949 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 IL21Q9HBE4 155 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 APOBEC3GQ9HC16 384 aaKnown RBP12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 AVENQ9NQS1 362 aaPredicted RBP12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 CHMP5Q9NZZ3 219 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 CGNQ9P2M7 1197 aaKnown RBP12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 HMGXB4Q9UGU5 601 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 CA14Q9ULX7 337 aa12.23□□□□□ -0.45
RAPGEF1-207ENST00000481260 PI15O43692 258 aa12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 CALUO43852 315 aaPredicted RBP12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 HMGA1P17096 107 aaKnown RBP12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 WARSP23381 471 aaKnown RBP12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 GCLMP48507 274 aa12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 PLD1Q13393 1074 aa12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 NCOA4Q13772 614 aa12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 GRM2Q14416 872 aa12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 WDR72Q3MJ13 1102 aa12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 ZNF658Q5TYW1 1059 aaPredicted RBP12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 CWF19L1Q69YN2 538 aaKnown RBP12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 FAM171BQ6P995 826 aa12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 PDZD4Q76G19 769 aaPredicted RBP12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 SV2AQ7L0J3 742 aa12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 RTL10Q7L3V2 364 aa12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 TMEM150AQ86TG1 271 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms