RNA–Protein interactions for RNA: ENST00000480737.1

FN1-221, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 384 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-221ENST00000480737 TEDDM1Q5T9Z0 273 aa3.96□□□□□ -1.78
FN1-221ENST00000480737 THEMIS2Q5TEJ8 643 aa3.96□□□□□ -1.78
FN1-221ENST00000480737 AMIGO2Q86SJ2 522 aa3.96□□□□□ -1.78
FN1-221ENST00000480737 FKBP10Q96AY3 582 aa3.96□□□□□ -1.78
FN1-221ENST00000480737 FAM136AQ96C01 138 aa3.96□□□□□ -1.78
FN1-221ENST00000480737 REPS1Q96D71 796 aa3.96□□□□□ -1.78
FN1-221ENST00000480737 FAM167AQ96KS9 214 aa3.96□□□□□ -1.78
FN1-221ENST00000480737 ZNF778Q96MU6 729 aa3.96□□□□□ -1.78
FN1-221ENST00000480737 HAPLN3Q96S86 360 aa3.96□□□□□ -1.78
FN1-221ENST00000480737 C1orf43Q9BWL3 253 aa3.96□□□□□ -1.78
FN1-221ENST00000480737 SEMA4CQ9C0C4 833 aa3.96□□□□□ -1.78
FN1-221ENST00000480737 MRPL46Q9H2W6 279 aaKnown RBP3.96□□□□□ -1.78
FN1-221ENST00000480737 PEG3Q9GZU2 1588 aa3.95□□□□□ -1.78
FN1-221ENST00000480737 F5H697 171 aa3.95□□□□□ -1.78
FN1-221ENST00000480737 ZNF213O14771 459 aa3.95□□□□□ -1.78
FN1-221ENST00000480737 NXPH3O95157 252 aa3.95□□□□□ -1.78
FN1-221ENST00000480737 TTLL1O95922 423 aa3.95□□□□□ -1.78
FN1-221ENST00000480737 JUPP14923 745 aa3.95□□□□□ -1.78
FN1-221ENST00000480737 ZFXP17010 805 aaPredicted RBP3.95□□□□□ -1.78
FN1-221ENST00000480737 RECQLP46063 649 aaPredicted RBP3.95□□□□□ -1.78
FN1-221ENST00000480737 PSMC1P62191 440 aaKnown RBP3.95□□□□□ -1.78
FN1-221ENST00000480737 BMPR2Q13873 1038 aa3.95□□□□□ -1.78
FN1-221ENST00000480737 PTPN21Q16825 1174 aa3.95□□□□□ -1.78
FN1-221ENST00000480737 RBM20Q5T481 1227 aaKnown RBP3.95□□□□□ -1.78
FN1-221ENST00000480737 ZNF425Q6IV72 752 aa3.95□□□□□ -1.78
FN1-221ENST00000480737 USP45Q70EL2 814 aa3.95□□□□□ -1.78
FN1-221ENST00000480737 ZNF551Q7Z340 670 aaPredicted RBP3.95□□□□□ -1.78
FN1-221ENST00000480737 DTX2Q86UW9 622 aa3.95□□□□□ -1.78
FN1-221ENST00000480737 PNMA8AQ86V59 439 aaPredicted RBP3.95□□□□□ -1.78
FN1-221ENST00000480737 MIER2Q8N344 545 aa3.95□□□□□ -1.78
FN1-221ENST00000480737 Q8N9P0 234 aaPredicted RBP3.95□□□□□ -1.78
FN1-221ENST00000480737 TBC1D5Q92609 795 aa3.95□□□□□ -1.78
FN1-221ENST00000480737 RGMAQ96B86 450 aa3.95□□□□□ -1.78
FN1-221ENST00000480737 NAF1Q96HR8 494 aaKnown RBP3.95□□□□□ -1.78
FN1-221ENST00000480737 NELL2Q99435 816 aa3.95□□□□□ -1.78
FN1-221ENST00000480737 ACTRT3Q9BYD9 372 aa3.95□□□□□ -1.78
FN1-221ENST00000480737 TCF7L1Q9HCS4 588 aa3.95□□□□□ -1.78
FN1-221ENST00000480737 SERHLQ9NQF3 203 aa3.95□□□□□ -1.78
FN1-221ENST00000480737 SH2B3Q9UQQ2 575 aa3.95□□□□□ -1.78
FN1-221ENST00000480737 SMARCA4P51532 1647 aa3.95□□□□□ -1.78
FN1-221ENST00000480737 ZNF804BA4D1E1 1349 aa3.95□□□□□ -1.78
FN1-221ENST00000480737 KRTAP29-1A8MX34 341 aaPredicted RBP3.94□□□□□ -1.78
FN1-221ENST00000480737 TARM1B6A8C7 271 aa3.94□□□□□ -1.78
FN1-221ENST00000480737 DTNBO60941 627 aa3.94□□□□□ -1.78
FN1-221ENST00000480737 KIF20AO95235 890 aa3.94□□□□□ -1.78
FN1-221ENST00000480737 POU2F2P09086 479 aa3.94□□□□□ -1.78
FN1-221ENST00000480737 HMGB1P09429 215 aaKnown RBP3.94□□□□□ -1.78
FN1-221ENST00000480737 TYRP14679 529 aa3.94□□□□□ -1.78
FN1-221ENST00000480737 ITGB6P18564 788 aa3.94□□□□□ -1.78
FN1-221ENST00000480737 ITGALP20701 1170 aa3.94□□□□□ -1.78
FN1-221ENST00000480737 PDCP20941 246 aa3.94□□□□□ -1.78
FN1-221ENST00000480737 CD6P30203 668 aa3.94□□□□□ -1.78
FN1-221ENST00000480737 ABCG1P45844 678 aa3.94□□□□□ -1.78
FN1-221ENST00000480737 CCT8P50990 548 aa3.94□□□□□ -1.78
FN1-221ENST00000480737 BOP1Q14137 746 aaKnown RBP3.94□□□□□ -1.78
FN1-221ENST00000480737 FAM153CQ494X1 144 aa3.94□□□□□ -1.78
FN1-221ENST00000480737 PLAC9Q5JTB6 97 aa3.94□□□□□ -1.78
FN1-221ENST00000480737 ZNF618Q5T7W0 954 aa3.94□□□□□ -1.78
FN1-221ENST00000480737 ANKRD16Q6P6B7 361 aa3.94□□□□□ -1.78
FN1-221ENST00000480737 HEATR3Q7Z4Q2 680 aa3.94□□□□□ -1.78
FN1-221ENST00000480737 RASAL3Q86YV0 1011 aa3.94□□□□□ -1.78
FN1-221ENST00000480737 KLHDC4Q8TBB5 520 aa3.94□□□□□ -1.78
FN1-221ENST00000480737 FBXO41Q8TF61 875 aa3.94□□□□□ -1.78
FN1-221ENST00000480737 ATRIPQ8WXE1 791 aa3.94□□□□□ -1.78
FN1-221ENST00000480737 TPSD1Q9BZJ3 242 aa3.94□□□□□ -1.78
FN1-221ENST00000480737 RNF7Q9UBF6 113 aa3.94□□□□□ -1.78
FN1-221ENST00000480737 DKK3Q9UBP4 350 aa3.94□□□□□ -1.78
FN1-221ENST00000480737 FEZ2Q9UHY8 353 aaPredicted RBP3.94□□□□□ -1.78
FN1-221ENST00000480737 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.93□□□□□ -1.78
FN1-221ENST00000480737 MYO1FO00160 1098 aa3.93□□□□□ -1.78
FN1-221ENST00000480737 NR2F6P10588 404 aa3.93□□□□□ -1.78
FN1-221ENST00000480737 PIM1P11309 404 aaPredicted RBP3.93□□□□□ -1.78
FN1-221ENST00000480737 SMARCA1P28370 1054 aa3.93□□□□□ -1.78
FN1-221ENST00000480737 PPIFP30405 207 aaKnown RBP3.93□□□□□ -1.78
FN1-221ENST00000480737 GCLCP48506 637 aaPredicted RBP3.93□□□□□ -1.78
FN1-221ENST00000480737 ZNF81P51508 661 aa3.93□□□□□ -1.78
FN1-221ENST00000480737 MAP2K6P52564 334 aa3.93□□□□□ -1.78
FN1-221ENST00000480737 NKX6-1P78426 367 aaPredicted RBP3.93□□□□□ -1.78
FN1-221ENST00000480737 EZH2Q15910 746 aaKnown RBP3.93□□□□□ -1.78
FN1-221ENST00000480737 PROSER3Q2NL68 480 aa3.93□□□□□ -1.78
FN1-221ENST00000480737 AARS2Q5JTZ9 985 aaKnown RBP3.93□□□□□ -1.78
FN1-221ENST00000480737 VPS53Q5VIR6 699 aa3.93□□□□□ -1.78
FN1-221ENST00000480737 FAM160B1Q5W0V3 765 aa3.93□□□□□ -1.78
FN1-221ENST00000480737 SUMO4Q6EEV6 95 aa3.93□□□□□ -1.78
FN1-221ENST00000480737 SFRP4Q6FHJ7 346 aaPredicted RBP3.93□□□□□ -1.78
FN1-221ENST00000480737 SLC30A10Q6XR72 485 aa3.93□□□□□ -1.78
FN1-221ENST00000480737 ZNF782Q6ZMW2 699 aaPredicted RBP3.93□□□□□ -1.78
FN1-221ENST00000480737 WDR53Q7Z5U6 358 aaPredicted RBP3.93□□□□□ -1.78
FN1-221ENST00000480737 USP37Q86T82 979 aa3.93□□□□□ -1.78
FN1-221ENST00000480737 C9orf106Q8NAJ2 232 aa3.93□□□□□ -1.78
FN1-221ENST00000480737 NUP88Q99567 741 aaPredicted RBP3.93□□□□□ -1.78
FN1-221ENST00000480737 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.93□□□□□ -1.78
FN1-221ENST00000480737 HESX1Q9UBX0 185 aa3.93□□□□□ -1.78
FN1-221ENST00000480737 PADI4Q9UM07 663 aa3.93□□□□□ -1.78
FN1-221ENST00000480737 ST3GAL5Q9UNP4 418 aa3.93□□□□□ -1.78
FN1-221ENST00000480737 PCDHA3Q9Y5H8 950 aa3.93□□□□□ -1.78
FN1-221ENST00000480737 RAD54BQ9Y620 910 aa3.93□□□□□ -1.78
FN1-221ENST00000480737 SMARCA2P51531 1590 aa3.93□□□□□ -1.78
FN1-221ENST00000480737 DNAJB5O75953 348 aa3.92□□□□□ -1.78
FN1-221ENST00000480737 TJP3O95049 919 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms