RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 SERPIND1P05546 499 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 PRIM2P49643 509 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 TOB2Q14106 344 aaPredicted RBP9.94□□□□□ -0.82
VEGFA-212ENST00000480614 USP10Q14694 798 aaKnown RBP9.94□□□□□ -0.82
VEGFA-212ENST00000480614 TMEM132BQ14DG7 1078 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 EFHC1Q5JVL4 640 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 PI16Q6UXB8 463 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 ATXN7L3BQ96GX2 97 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 UBE2OQ9C0C9 1292 aaKnown RBP9.94□□□□□ -0.82
VEGFA-212ENST00000480614 TASP1Q9H6P5 420 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 C20orf96Q9NUD7 363 aaPredicted RBP9.94□□□□□ -0.82
VEGFA-212ENST00000480614 KLHL11Q9NVR0 708 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 KCNA3P22001 575 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 FDFT1P37268 417 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 COPAP53621 1224 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 PLOD1Q02809 727 aaPredicted RBP9.94□□□□□ -0.82
VEGFA-212ENST00000480614 CRYMQ14894 314 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 CHMP1BQ7LBR1 199 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 DPP10Q8N608 796 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 SOX13Q9UN79 622 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 EIF3LQ9Y262 564 aaKnown RBP9.94□□□□□ -0.82
VEGFA-212ENST00000480614 ODC1P11926 461 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 GUCY1A2P33402 732 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 MKNK1Q9BUB5 465 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 RPAP3Q9H6T3 665 aaPredicted RBP9.94□□□□□ -0.82
VEGFA-212ENST00000480614 SYNDIG1Q9H7V2 258 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 KRT84Q9NSB2 600 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 FHOD1Q9Y613 1164 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 PPP1R37O75864 691 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 ALDH1A3P47895 512 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 MRPS35P82673 323 aaKnown RBP9.94□□□□□ -0.82
VEGFA-212ENST00000480614 WNK4Q96J92 1243 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 MCEEQ96PE7 176 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 TMEM8AQ9HCN3 771 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 CHMP2BQ9UQN3 213 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 F5H6K3 240 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 GARTP22102 1010 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 SERPINB8P50452 374 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 ST13P50502 369 aaKnown RBP9.94□□□□□ -0.82
VEGFA-212ENST00000480614 KLRC3Q07444 240 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 SGMS1Q86VZ5 419 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 NT5DC4Q86YG4 428 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 NSL1Q96IY1 281 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 YIPF2Q9BWQ6 316 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 C17orf75Q9HAS0 396 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 IL1RAPL1Q9NZN1 696 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 RRN3P2A6NIE6 340 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 ATP9BO43861 1147 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 FAM200BP0CF97 657 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 ENO3P13929 434 aaPredicted RBP9.94□□□□□ -0.82
VEGFA-212ENST00000480614 ACADSP16219 412 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 LTKP29376 864 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 ADRM1Q16186 407 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 AGAP9Q5VTM2 703 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 CYP4Z1Q86W10 505 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 MICU2Q8IYU8 434 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 LIMA1Q9UHB6 759 aaKnown RBP9.94□□□□□ -0.82
VEGFA-212ENST00000480614 MINPP1Q9UNW1 487 aa9.94□□□□□ -0.82
VEGFA-212ENST00000480614 SPATA31E1Q6ZUB1 1445 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 EEF2KO00418 725 aaKnown RBP9.93□□□□□ -0.82
VEGFA-212ENST00000480614 CHN1P15882 459 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 DNAJC9Q8WXX5 260 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 PRMT1Q99873 361 aaKnown RBP9.93□□□□□ -0.82
VEGFA-212ENST00000480614 SPASTQ9UBP0 616 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 IPPQ9Y573 584 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 ARHGAP17Q68EM7 881 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 P3H2Q8IVL5 708 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 MB21D2Q8IYB1 491 aaPredicted RBP9.93□□□□□ -0.82
VEGFA-212ENST00000480614 RDM1Q8NG50 284 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 SLC35G2Q8TBE7 412 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 CINPQ9BW66 212 aaPredicted RBP9.93□□□□□ -0.82
VEGFA-212ENST00000480614 CLTCQ00610 1675 aaKnown RBP9.93□□□□□ -0.82
VEGFA-212ENST00000480614 PXDNLA1KZ92 1463 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 F8W810 466 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 SNAP25P60880 206 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 POLD3Q15054 466 aaPredicted RBP9.93□□□□□ -0.82
VEGFA-212ENST00000480614 FAM83EQ2M2I3 478 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 ZNF438Q7Z4V0 828 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 CCNJLQ8IV13 435 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 DSEQ9UL01 958 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 FAM186AA6NE01 2351 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 LOC102724159A0A0B4J2E5 919 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 GH1P01241 217 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 PWP2Q15269 919 aaKnown RBP9.93□□□□□ -0.82
VEGFA-212ENST00000480614 PABPC5Q96DU9 382 aaKnown RBP9.93□□□□□ -0.82
VEGFA-212ENST00000480614 A0A087WWV3 80 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 A0A1B0GTH6 734 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 H7C4K7 107 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 EIF3HO15372 352 aaKnown RBP eCLIP9.93□□□□□ -0.825e-7■■■□□ 17.2
VEGFA-212ENST00000480614 KRT20P35900 424 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 ETFBP38117 255 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 MTA1Q13330 715 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 MMGT1Q8N4V1 131 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 ARMC7Q9H6L4 198 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 CD209Q9NNX6 404 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 PCMTD2Q9NV79 361 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 UNC13BO14795 1591 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 SETBP1Q9Y6X0 1596 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 TRAF7Q6Q0C0 670 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 PRPF39Q86UA1 669 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms