RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 CBWD3Q5JTY5 395 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 CBWD5Q5RIA9 395 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 CCDC183Q5T5S1 534 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 KRT39Q6A163 491 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 RBM43Q6ZSC3 357 aaKnown RBP12.93□□□□□ -0.34
CCM2-212ENST00000480382 DPH6Q7L8W6 267 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 FRMD5Q7Z6J6 570 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 FILIP1Q7Z7B0 1213 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 LRRTM3Q86VH5 581 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 TCEAL8Q8IYN2 117 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 SPATA18Q8TC71 538 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 SLC35C1Q96A29 364 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 RPGRIP1Q96KN7 1286 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 MED15Q96RN5 788 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 MRPL45Q9BRJ2 306 aaKnown RBP12.93□□□□□ -0.34
CCM2-212ENST00000480382 PI4K2AQ9BTU6 479 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 TMLHEQ9NVH6 421 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 CLUHO75153 1309 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 XYLBO75191 536 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 LRRN2O75325 713 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 TACC1O75410 805 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 ASS1P00966 412 aaKnown RBP12.92□□□□□ -0.34
CCM2-212ENST00000480382 SSTR3P32745 418 aaPredicted RBP12.92□□□□□ -0.34
CCM2-212ENST00000480382 PSMC1P62191 440 aaKnown RBP12.92□□□□□ -0.34
CCM2-212ENST00000480382 NTHL1P78549 312 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 TWF1Q12792 350 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 DUSP4Q13115 394 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 SGSM1Q2NKQ1 1148 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 CYP26C1Q6V0L0 522 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 GRASPQ7Z6J2 395 aaPredicted RBP12.92□□□□□ -0.34
CCM2-212ENST00000480382 DCP1BQ8IZD4 617 aaKnown RBP12.92□□□□□ -0.34
CCM2-212ENST00000480382 ATAD1Q8NBU5 361 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 TAF4BQ92750 862 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 SEMA4DQ92854 862 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 TTC28Q96AY4 2481 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 SYT15Q9BQS2 421 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 ACBD6Q9BR61 282 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 SRRTQ9BXP5 876 aaKnown RBP12.92□□□□□ -0.34
CCM2-212ENST00000480382 RHOBTB2Q9BYZ6 727 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 IMPG2Q9BZV3 1241 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 SDCBP2Q9H190 292 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 SNX25Q9H3E2 840 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 APOBEC3GQ9HC16 384 aaKnown RBP12.92□□□□□ -0.34
CCM2-212ENST00000480382 METTL14Q9HCE5 456 aaKnown RBP12.92□□□□□ -0.34
CCM2-212ENST00000480382 CD320Q9NPF0 282 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 HCFC1R1Q9NWW0 138 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 ABI2Q9NYB9 513 aaPredicted RBP12.92□□□□□ -0.34
CCM2-212ENST00000480382 TMEM63CQ9P1W3 806 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 DACH1Q9UI36 760 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 MAFFQ9ULX9 164 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 NME7Q9Y5B8 376 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 DOCK8Q8NF50 2099 aa12.92□□□□□ -0.34
CCM2-212ENST00000480382 LOC730098B7Z3J9 87 aa12.91□□□□□ -0.34
CCM2-212ENST00000480382 SOAT2O75908 522 aa12.91□□□□□ -0.34
CCM2-212ENST00000480382 POU2F2P09086 479 aa12.91□□□□□ -0.34
CCM2-212ENST00000480382 PDGFRBP09619 1106 aa12.91□□□□□ -0.34
CCM2-212ENST00000480382 LMO2P25791 158 aa12.91□□□□□ -0.34
CCM2-212ENST00000480382 PCSK1P29120 753 aa12.91□□□□□ -0.34
CCM2-212ENST00000480382 ASPAP45381 313 aa12.91□□□□□ -0.34
CCM2-212ENST00000480382 CDH8P55286 799 aa12.91□□□□□ -0.34
CCM2-212ENST00000480382 NOP14P78316 857 aaKnown RBP12.91□□□□□ -0.34
CCM2-212ENST00000480382 RTL10Q7L3V2 364 aa12.91□□□□□ -0.34
CCM2-212ENST00000480382 FBXL13Q8NEE6 735 aa12.91□□□□□ -0.34
CCM2-212ENST00000480382 OR6B3Q8NGW1 331 aa12.91□□□□□ -0.34
CCM2-212ENST00000480382 CNOT6LQ96LI5 555 aaKnown RBP12.91□□□□□ -0.34
CCM2-212ENST00000480382 PKMYT1Q99640 499 aa12.91□□□□□ -0.34
CCM2-212ENST00000480382 SEPT5Q99719 369 aaPredicted RBP12.91□□□□□ -0.34
CCM2-212ENST00000480382 DPEP3Q9H4B8 488 aa12.91□□□□□ -0.34
CCM2-212ENST00000480382 WDR6Q9NNW5 1121 aaKnown RBP12.91□□□□□ -0.34
CCM2-212ENST00000480382 GTF3C4Q9UKN8 822 aa12.91□□□□□ -0.34
CCM2-212ENST00000480382 CDH9Q9ULB4 789 aa12.91□□□□□ -0.34
CCM2-212ENST00000480382 SLC27A5Q9Y2P5 690 aa12.91□□□□□ -0.34
CCM2-212ENST00000480382 MYBPHLA2RUH7 354 aa12.9□□□□□ -0.34
CCM2-212ENST00000480382 C19orf67A6NJJ6 358 aa12.9□□□□□ -0.34
CCM2-212ENST00000480382 C2CD4DB7Z1M9 353 aa12.9□□□□□ -0.34
CCM2-212ENST00000480382 ATP2C2O75185 946 aa12.9□□□□□ -0.34
CCM2-212ENST00000480382 FGFR1OPO95684 399 aaKnown RBP12.9□□□□□ -0.34
CCM2-212ENST00000480382 GNA14O95837 355 aa12.9□□□□□ -0.34
CCM2-212ENST00000480382 P4HA1P13674 534 aa12.9□□□□□ -0.34
CCM2-212ENST00000480382 ERCC5P28715 1186 aaPredicted RBP12.9□□□□□ -0.34
CCM2-212ENST00000480382 FMO5P49326 533 aa12.9□□□□□ -0.34
CCM2-212ENST00000480382 MARSP56192 900 aaKnown RBP12.9□□□□□ -0.34
CCM2-212ENST00000480382 SMARCB1Q12824 385 aa12.9□□□□□ -0.34
CCM2-212ENST00000480382 MGAT5BQ3V5L5 792 aa12.9□□□□□ -0.34
CCM2-212ENST00000480382 CAVIN1Q6NZI2 390 aaKnown RBP12.9□□□□□ -0.34
CCM2-212ENST00000480382 GET4Q7L5D6 327 aaPredicted RBP12.9□□□□□ -0.34
CCM2-212ENST00000480382 TRIM59Q8IWR1 403 aa12.9□□□□□ -0.34
CCM2-212ENST00000480382 GJD3Q8N144 294 aa12.9□□□□□ -0.34
CCM2-212ENST00000480382 TDRD5Q8NAT2 981 aaKnown RBP12.9□□□□□ -0.34
CCM2-212ENST00000480382 SPPL2BQ8TCT7 592 aa12.9□□□□□ -0.34
CCM2-212ENST00000480382 C2orf15Q8WU43 125 aaKnown RBP12.9□□□□□ -0.34
CCM2-212ENST00000480382 DNAJC25Q9H1X3 360 aa12.9□□□□□ -0.34
CCM2-212ENST00000480382 CRTAC1Q9NQ79 661 aa12.9□□□□□ -0.34
CCM2-212ENST00000480382 RAB20Q9NX57 234 aa12.9□□□□□ -0.34
CCM2-212ENST00000480382 CEP72Q9P209 647 aa12.9□□□□□ -0.34
CCM2-212ENST00000480382 DNMT3BQ9UBC3 853 aaKnown RBP12.9□□□□□ -0.34
CCM2-212ENST00000480382 HMGXB4Q9UGU5 601 aa12.9□□□□□ -0.34
CCM2-212ENST00000480382 NR2E1Q9Y466 385 aa12.9□□□□□ -0.34
CCM2-212ENST00000480382 PCDHB5Q9Y5E4 795 aa12.9□□□□□ -0.34
CCM2-212ENST00000480382 OBSL1O75147 1896 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms