RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 GPC5P78333 572 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 FOXK2Q01167 660 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 POU5F1Q01860 360 aaKnown RBP9.75□□□□□ -0.85
VCP-206ENST00000480327 BFSP1Q12934 665 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 BIRC3Q13489 604 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 UPP1Q16831 310 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 DUOXA2Q1HG44 320 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 C1orf220Q5T0J3 134 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 C9orf57Q5W0N0 161 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 PHLDB3Q6NSJ2 640 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 DCLRE1AQ6PJP8 1040 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 INTS8Q75QN2 995 aaKnown RBP9.75□□□□□ -0.85
VCP-206ENST00000480327 GRASPQ7Z6J2 395 aaPredicted RBP9.75□□□□□ -0.85
VCP-206ENST00000480327 FILIP1Q7Z7B0 1213 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 WDR49Q8IV35 697 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 ZC3H3Q8IXZ2 948 aaKnown RBP9.75□□□□□ -0.85
VCP-206ENST00000480327 C1orf127Q8N9H9 656 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 C3orf58Q8NDZ4 430 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 ITFG1Q8TB96 612 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 PARD3BQ8TEW8 1205 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 PIK3R5Q8WYR1 880 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 NXPE3Q969Y0 559 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 ELMO3Q96BJ8 720 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 RMDN1Q96DB5 314 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 DDX27Q96GQ7 796 aaKnown RBP9.75□□□□□ -0.85
VCP-206ENST00000480327 CEP63Q96MT8 703 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 UROC1Q96N76 676 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.75□□□□□ -0.85
VCP-206ENST00000480327 ARHGEF3Q9NR81 526 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.75□□□□□ -0.85
VCP-206ENST00000480327 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.75□□□□□ -0.85
VCP-206ENST00000480327 AGAP1Q9UPQ3 857 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 C2CD2Q9Y426 696 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 MTF2Q9Y483 593 aaPredicted RBP9.75□□□□□ -0.85
VCP-206ENST00000480327 NUB1Q9Y5A7 615 aa9.75□□□□□ -0.85
VCP-206ENST00000480327 KIF26AQ9ULI4 1882 aaPredicted RBP9.74□□□□□ -0.85
VCP-206ENST00000480327 NCOR2Q9Y618 2525 aa9.74□□□□□ -0.85
VCP-206ENST00000480327 SCN1AP35498 2009 aa9.74□□□□□ -0.85
VCP-206ENST00000480327 NRG2O14511 850 aaPredicted RBP9.74□□□□□ -0.85
VCP-206ENST00000480327 MAPK13O15264 365 aa9.74□□□□□ -0.85
VCP-206ENST00000480327 FGFR1OPO95684 399 aaKnown RBP9.74□□□□□ -0.85
VCP-206ENST00000480327 FSHRP23945 695 aa9.74□□□□□ -0.85
VCP-206ENST00000480327 LRPAP1P30533 357 aa9.74□□□□□ -0.85
VCP-206ENST00000480327 RPL9P32969 192 aaKnown RBP9.74□□□□□ -0.85
VCP-206ENST00000480327 STARD6P59095 220 aa9.74□□□□□ -0.85
VCP-206ENST00000480327 PPP3CAQ08209 521 aa9.74□□□□□ -0.85
VCP-206ENST00000480327 FAM171A1Q5VUB5 890 aa9.74□□□□□ -0.85
VCP-206ENST00000480327 TDRD10Q5VZ19 366 aaKnown RBP9.74□□□□□ -0.85
VCP-206ENST00000480327 TRAPPC11Q7Z392 1133 aa9.74□□□□□ -0.85
VCP-206ENST00000480327 CEP57Q86XR8 500 aa9.74□□□□□ -0.85
VCP-206ENST00000480327 NT5DC4Q86YG4 428 aa9.74□□□□□ -0.85
VCP-206ENST00000480327 AOPEPQ8N6M6 819 aa9.74□□□□□ -0.85
VCP-206ENST00000480327 PJA1Q8NG27 643 aa9.74□□□□□ -0.85
VCP-206ENST00000480327 TMC2Q8TDI7 906 aa9.74□□□□□ -0.85
VCP-206ENST00000480327 BORCS6Q96GS4 357 aa9.74□□□□□ -0.85
VCP-206ENST00000480327 CNOT6LQ96LI5 555 aaKnown RBP9.74□□□□□ -0.85
VCP-206ENST00000480327 TSPAN18Q96SJ8 248 aa9.74□□□□□ -0.85
VCP-206ENST00000480327 FUCA2Q9BTY2 467 aa9.74□□□□□ -0.85
VCP-206ENST00000480327 MKNK1Q9BUB5 465 aa9.74□□□□□ -0.85
VCP-206ENST00000480327 DDX23Q9BUQ8 820 aaKnown RBP9.74□□□□□ -0.85
VCP-206ENST00000480327 PIDD1Q9HB75 910 aa9.74□□□□□ -0.85
VCP-206ENST00000480327 SAMSN1Q9NSI8 373 aaKnown RBP9.74□□□□□ -0.85
VCP-206ENST00000480327 HCFC1R1Q9NWW0 138 aa9.74□□□□□ -0.85
VCP-206ENST00000480327 ARMCX3Q9UH62 379 aaPredicted RBP9.74□□□□□ -0.85
VCP-206ENST00000480327 DPP7Q9UHL4 492 aa9.74□□□□□ -0.85
VCP-206ENST00000480327 R3HCC1Q9Y3T6 440 aaKnown RBP9.74□□□□□ -0.85
VCP-206ENST00000480327 NFE2L3Q9Y4A8 694 aa9.74□□□□□ -0.85
VCP-206ENST00000480327 KMT2BQ9UMN6 2715 aaPredicted RBP9.74□□□□□ -0.85
VCP-206ENST00000480327 MED19A0JLT2 244 aaPredicted RBP9.73□□□□□ -0.85
VCP-206ENST00000480327 ANO9A1A5B4 782 aa9.73□□□□□ -0.85
VCP-206ENST00000480327 STK25O00506 426 aa9.73□□□□□ -0.85
VCP-206ENST00000480327 PIRO00625 290 aa9.73□□□□□ -0.85
VCP-206ENST00000480327 SPTLC1O15269 473 aa9.73□□□□□ -0.85
VCP-206ENST00000480327 CCL16O15467 120 aa9.73□□□□□ -0.85
VCP-206ENST00000480327 CST3P01034 146 aaPredicted RBP9.73□□□□□ -0.85
VCP-206ENST00000480327 LMNAP02545 664 aaKnown RBP9.73□□□□□ -0.85
VCP-206ENST00000480327 C4BPAP04003 597 aaKnown RBP9.73□□□□□ -0.85
VCP-206ENST00000480327 C8AP07357 584 aa9.73□□□□□ -0.85
VCP-206ENST00000480327 TRPC3Q13507 836 aa9.73□□□□□ -0.85
VCP-206ENST00000480327 PSMD5Q16401 504 aa9.73□□□□□ -0.85
VCP-206ENST00000480327 CT47A1Q5JQC4 288 aaPredicted RBP9.73□□□□□ -0.85
VCP-206ENST00000480327 FOXR2Q6PJQ5 311 aa9.73□□□□□ -0.85
VCP-206ENST00000480327 DSTYKQ6XUX3 929 aa9.73□□□□□ -0.85
VCP-206ENST00000480327 ERMP1Q7Z2K6 904 aa9.73□□□□□ -0.85
VCP-206ENST00000480327 IRF2BP1Q8IU81 584 aa9.73□□□□□ -0.85
VCP-206ENST00000480327 DCLK2Q8N568 766 aa9.73□□□□□ -0.85
VCP-206ENST00000480327 SUMF1Q8NBK3 374 aa9.73□□□□□ -0.85
VCP-206ENST00000480327 FGF13Q92913 245 aa9.73□□□□□ -0.85
VCP-206ENST00000480327 TTPALQ9BTX7 342 aa9.73□□□□□ -0.85
VCP-206ENST00000480327 NAT10Q9H0A0 1025 aaKnown RBP9.73□□□□□ -0.85
VCP-206ENST00000480327 METTL14Q9HCE5 456 aaKnown RBP9.73□□□□□ -0.85
VCP-206ENST00000480327 FANCLQ9NW38 375 aa9.73□□□□□ -0.85
VCP-206ENST00000480327 DNMT3BQ9UBC3 853 aaKnown RBP9.73□□□□□ -0.85
VCP-206ENST00000480327 SIX4Q9UIU6 781 aa9.73□□□□□ -0.85
VCP-206ENST00000480327 ITGA11Q9UKX5 1188 aa9.73□□□□□ -0.85
VCP-206ENST00000480327 CDH7Q9ULB5 785 aa9.73□□□□□ -0.85
VCP-206ENST00000480327 SIT1Q9Y3P8 196 aa9.73□□□□□ -0.85
VCP-206ENST00000480327 TIMM13Q9Y5L4 95 aaPredicted RBP9.73□□□□□ -0.85
VCP-206ENST00000480327 SF3B1O75533 1304 aaKnown RBP eCLIP9.73□□□□□ -0.85
VCP-206ENST00000480327 TMEM189-UBE2V1I3L0A0 370 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms