RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 EPHB6O15197 1021 aa11.94□□□□□ -0.5
CLDN11-205ENST00000480067 CILPO75339 1184 aa11.94□□□□□ -0.5
CLDN11-205ENST00000480067 CNPP09543 421 aaKnown RBP11.94□□□□□ -0.5
CLDN11-205ENST00000480067 RPL17P18621 184 aaKnown RBP11.94□□□□□ -0.5
CLDN11-205ENST00000480067 ACAT1P24752 427 aaKnown RBP11.94□□□□□ -0.5
CLDN11-205ENST00000480067 IRS1P35568 1242 aa11.94□□□□□ -0.5
CLDN11-205ENST00000480067 PBX1P40424 430 aa11.94□□□□□ -0.5
CLDN11-205ENST00000480067 USP8P40818 1118 aa11.94□□□□□ -0.5
CLDN11-205ENST00000480067 ZNF75DP51815 510 aa11.94□□□□□ -0.5
CLDN11-205ENST00000480067 ARPP19P56211 112 aa11.94□□□□□ -0.5
CLDN11-205ENST00000480067 TMEM270Q6UE05 265 aa11.94□□□□□ -0.5
CLDN11-205ENST00000480067 OSTM1Q86WC4 334 aa11.94□□□□□ -0.5
CLDN11-205ENST00000480067 MRFAP1L1Q96HT8 127 aa11.94□□□□□ -0.5
CLDN11-205ENST00000480067 SPAG5Q96R06 1193 aa11.94□□□□□ -0.5
CLDN11-205ENST00000480067 RTP3Q9BQQ7 232 aa11.94□□□□□ -0.5
CLDN11-205ENST00000480067 NAA15Q9BXJ9 866 aaKnown RBP11.94□□□□□ -0.5
CLDN11-205ENST00000480067 GANQ9H2C0 597 aa11.94□□□□□ -0.5
CLDN11-205ENST00000480067 RXFP1Q9HBX9 757 aa11.94□□□□□ -0.5
CLDN11-205ENST00000480067 NLRC4Q9NPP4 1024 aa11.94□□□□□ -0.5
CLDN11-205ENST00000480067 CEP72Q9P209 647 aa11.94□□□□□ -0.5
CLDN11-205ENST00000480067 FNIP2Q9P278 1114 aa11.94□□□□□ -0.5
CLDN11-205ENST00000480067 CDH9Q9ULB4 789 aa11.94□□□□□ -0.5
CLDN11-205ENST00000480067 PCDHGC5Q9Y5F6 944 aa11.94□□□□□ -0.5
CLDN11-205ENST00000480067 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.94□□□□□ -0.5
CLDN11-205ENST00000480067 CDY1Q9Y6F8 540 aa11.94□□□□□ -0.5
CLDN11-205ENST00000480067 ITIH6Q6UXX5 1313 aa11.93□□□□□ -0.5
CLDN11-205ENST00000480067 FOXN3O00409 490 aaPredicted RBP11.93□□□□□ -0.5
CLDN11-205ENST00000480067 TEX28O15482 410 aa11.93□□□□□ -0.5
CLDN11-205ENST00000480067 TBC1D4O60343 1298 aa11.93□□□□□ -0.5
CLDN11-205ENST00000480067 ADCY5O95622 1261 aa11.93□□□□□ -0.5
CLDN11-205ENST00000480067 ADH1AP07327 375 aa11.93□□□□□ -0.5
CLDN11-205ENST00000480067 CPB1P15086 417 aa11.93□□□□□ -0.5
CLDN11-205ENST00000480067 ACO1P21399 889 aaKnown RBP11.93□□□□□ -0.5
CLDN11-205ENST00000480067 KLRC2P26717 231 aa11.93□□□□□ -0.5
CLDN11-205ENST00000480067 OR1D2P34982 312 aa11.93□□□□□ -0.5
CLDN11-205ENST00000480067 NDUFV1P49821 464 aa11.93□□□□□ -0.5
CLDN11-205ENST00000480067 DRAP1Q14919 205 aaPredicted RBP11.93□□□□□ -0.5
CLDN11-205ENST00000480067 FIGNQ5HY92 759 aa11.93□□□□□ -0.5
CLDN11-205ENST00000480067 SLC8B1Q6J4K2 584 aa11.93□□□□□ -0.5
CLDN11-205ENST00000480067 RSPO2Q6UXX9 243 aaPredicted RBP11.93□□□□□ -0.5
CLDN11-205ENST00000480067 ACOT1Q86TX2 421 aa11.93□□□□□ -0.5
CLDN11-205ENST00000480067 GLYCTKQ8IVS8 523 aa11.93□□□□□ -0.5
CLDN11-205ENST00000480067 VSTM4Q8IW00 320 aa11.93□□□□□ -0.5
CLDN11-205ENST00000480067 DCP1BQ8IZD4 617 aaKnown RBP11.93□□□□□ -0.5
CLDN11-205ENST00000480067 ZNF397Q8NF99 534 aaPredicted RBP11.93□□□□□ -0.5
CLDN11-205ENST00000480067 OR10T2Q8NGX3 314 aa11.93□□□□□ -0.5
CLDN11-205ENST00000480067 CPLX3Q8WVH0 158 aa11.93□□□□□ -0.5
CLDN11-205ENST00000480067 PPP2R3CQ969Q6 453 aa11.93□□□□□ -0.5
CLDN11-205ENST00000480067 IQCDQ96DY2 449 aa11.93□□□□□ -0.5
CLDN11-205ENST00000480067 TMEM176AQ96HP8 235 aa11.93□□□□□ -0.5
CLDN11-205ENST00000480067 HEXIM2Q96MH2 286 aaKnown RBP11.93□□□□□ -0.5
CLDN11-205ENST00000480067 SYT15Q9BQS2 421 aa11.93□□□□□ -0.5
CLDN11-205ENST00000480067 CLSTN3Q9BQT9 956 aa11.93□□□□□ -0.5
CLDN11-205ENST00000480067 EDEM3Q9BZQ6 932 aa11.93□□□□□ -0.5
CLDN11-205ENST00000480067 LMCD1Q9NZU5 365 aa11.93□□□□□ -0.5
CLDN11-205ENST00000480067 HCRTO43612 131 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 ATP2C2O75185 946 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 TPM1P09493 284 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 PTPN1P18031 435 aaKnown RBP11.92□□□□□ -0.5
CLDN11-205ENST00000480067 IGFBP4P22692 258 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 MRE11P49959 708 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 PSMC1P62191 440 aaKnown RBP11.92□□□□□ -0.5
CLDN11-205ENST00000480067 ORC1Q13415 861 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 MAPRE1Q15691 268 aaKnown RBP11.92□□□□□ -0.5
CLDN11-205ENST00000480067 INTS6LQ5JSJ4 861 aaKnown RBP11.92□□□□□ -0.5
CLDN11-205ENST00000480067 RBM23Q86U06 439 aaKnown RBP11.92□□□□□ -0.5
CLDN11-205ENST00000480067 PPFIBP1Q86W92 1011 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 PALB2Q86YC2 1186 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 DRC7Q8IY82 874 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 CRYBG2Q8N1P7 616 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 B3GALNT2Q8NCR0 500 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 SHC3Q92529 594 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 KLHL5Q96PQ7 755 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 ZCWPW1Q9H0M4 648 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 DPEP3Q9H4B8 488 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 TLE6Q9H808 572 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 HMGXB4Q9UGU5 601 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 AJAP1Q9UKB5 411 aaPredicted RBP11.92□□□□□ -0.5
CLDN11-205ENST00000480067 GTF3C4Q9UKN8 822 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 KIAA1671Q9BY89 1806 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 EYSQ5T1H1 3165 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 MYBPHLA2RUH7 354 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 F8VZ95 297 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 RNF225M0QZC1 329 aaPredicted RBP11.92□□□□□ -0.5
CLDN11-205ENST00000480067 PER2O15055 1255 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 ADAM12O43184 909 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 OR4Q2P0C623 313 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 STAT1P42224 750 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 RAD23BP54727 409 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 SMARCB1Q12824 385 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 GPR17Q13304 367 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 RAB33AQ14088 237 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 TRIM14Q14142 442 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 NFE2Q16621 373 aaPredicted RBP11.92□□□□□ -0.5
CLDN11-205ENST00000480067 SLC39A12Q504Y0 691 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 SMYD5Q6GMV2 418 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 TMC6Q7Z403 805 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 LRRTM3Q86VH5 581 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 FAM71AQ8IYT1 594 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 DEFB123Q8N688 67 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms