RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 RNF114Q9Y508 228 aa6.44□□□□□ -1.38
UPF3A-205ENST00000479712 KCTD3Q9Y597 815 aa6.44□□□□□ -1.38
UPF3A-205ENST00000479712 A0A1W2PPL8 197 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 SH3D21A4FU49 640 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 TCAF2A6NFQ2 919 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 RFXAPO00287 272 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 IFRD1O00458 451 aaPredicted RBP6.43□□□□□ -1.38
UPF3A-205ENST00000479712 NRP1O14786 923 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 PHGDHO43175 533 aaKnown RBP6.43□□□□□ -1.38
UPF3A-205ENST00000479712 JUNP05412 331 aaKnown RBP6.43□□□□□ -1.38
UPF3A-205ENST00000479712 VSIG10L2P0DP72 767 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 MYF5P13349 255 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 MALP21145 153 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 GUCY1A2P33402 732 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 PTPN7P35236 360 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 TM4SF4P48230 202 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 ATP2C1P98194 919 aaPredicted RBP6.43□□□□□ -1.38
UPF3A-205ENST00000479712 CAP1Q01518 475 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 OLFM4Q6UX06 510 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 RASAL3Q86YV0 1011 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 TXNDC5Q8NBS9 432 aaKnown RBP6.43□□□□□ -1.38
UPF3A-205ENST00000479712 OR14K1Q8NGZ2 314 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 PGBD4Q96DM1 585 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 IL17RAQ96F46 866 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 TBCBQ99426 244 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 LRRC27Q9C0I9 530 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 EPHX3Q9H6B9 360 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 ATP6V0A4Q9HBG4 840 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 GBA2Q9HCG7 927 aaPredicted RBP6.43□□□□□ -1.38
UPF3A-205ENST00000479712 ADAM29Q9UKF5 820 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 DMTF1Q9Y222 760 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 ZDHHC9Q9Y397 364 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 LTN1O94822 1766 aa6.43□□□□□ -1.38
UPF3A-205ENST00000479712 USP42Q9H9J4 1324 aaKnown RBP6.43□□□□□ -1.38
UPF3A-205ENST00000479712 FRS3O43559 492 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 ZKSCAN1P17029 563 aaPredicted RBP6.42□□□□□ -1.38
UPF3A-205ENST00000479712 TM4SF1P30408 202 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 ATP8B2P98198 1209 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 SNAPC2Q13487 334 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 MTM1Q13496 603 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 FAM26FQ5R3K3 315 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 PRAMEF14Q5SWL7 426 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 XRRA1Q6P2D8 792 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 ATG14Q6ZNE5 492 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 TSHZ1Q6ZSZ6 1077 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 PDZD4Q76G19 769 aaPredicted RBP6.42□□□□□ -1.38
UPF3A-205ENST00000479712 RALYLQ86SE5 291 aaKnown RBP6.42□□□□□ -1.38
UPF3A-205ENST00000479712 ADGRG2Q8IZP9 1017 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 CARFQ8N187 725 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 ANKRD53Q8N9V6 530 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 USP38Q8NB14 1042 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 ACRBPQ8NEB7 543 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 MDM1Q8TC05 714 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 ADAMTS17Q8TE56 1095 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 CASKIN2Q8WXE0 1202 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 STON2Q8WXE9 905 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 CCDC138Q96M89 665 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 CDC5LQ99459 802 aaKnown RBP6.42□□□□□ -1.38
UPF3A-205ENST00000479712 HTATIP2Q9BUP3 242 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 SLC6A15Q9H2J7 730 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 WDCPQ9H6R7 721 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 PLCB1Q9NQ66 1216 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 JADE2Q9NQC1 790 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 ASAP1Q9ULH1 1129 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 ADGRB1O14514 1584 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 FAM208AQ9UK61 1670 aaKnown RBP6.42□□□□□ -1.38
UPF3A-205ENST00000479712 ANKRD26Q9UPS8 1709 aa6.42□□□□□ -1.38
UPF3A-205ENST00000479712 RGPD2P0DJD1 1756 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 ANKRD31Q8N7Z5 1873 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 A0A1B0GTL3 188 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 C9orf118A6NHY6 69 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 RHPN2P1A8MT19 583 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 RPS6KA4O75676 772 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 SERPINB2P05120 415 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 FTH1P19P0C7X4 201 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 FPR1P21462 350 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 PCSK1P29120 753 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 CASRP41180 1078 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 PIK3CBP42338 1070 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 ADCY7P51828 1080 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 CTXN1P60606 82 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 MESP2Q0VG99 397 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 ZNF568Q3ZCX4 644 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 GAGE13Q4V321 117 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 FLYWCH1Q4VC44 716 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 VPS37AQ8NEZ2 397 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 IL31RAQ8NI17 732 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 CD99L2Q8TCZ2 262 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 APIPQ96GX9 242 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 RPL10LQ96L21 214 aaKnown RBP6.41□□□□□ -1.38
UPF3A-205ENST00000479712 GDF15Q99988 308 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 BTBD1Q9H0C5 482 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 RSAD1Q9HA92 442 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 SARS2Q9NP81 518 aaKnown RBP6.41□□□□□ -1.38
UPF3A-205ENST00000479712 CNNM1Q9NRU3 951 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 MOCS1Q9NZB8 636 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 NCDNQ9UBB6 729 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 CPA4Q9UI42 421 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 CORO2BQ9UQ03 480 aa6.41□□□□□ -1.38
UPF3A-205ENST00000479712 ACTL7AQ9Y615 435 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms