RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 SPARCL1Q14515 664 aa25.97■■□□□ 1.75
SYNGAP1-206ENST00000479510 ATP13A4Q4VNC1 1196 aa25.97■■□□□ 1.75
SYNGAP1-206ENST00000479510 FAM160B1Q5W0V3 765 aa25.97■■□□□ 1.75
SYNGAP1-206ENST00000479510 KAZNQ674X7 775 aa25.97■■□□□ 1.75
SYNGAP1-206ENST00000479510 ZNF526Q8TF50 670 aaPredicted RBP25.97■■□□□ 1.75
SYNGAP1-206ENST00000479510 WRNIP1Q96S55 665 aa25.97■■□□□ 1.75
SYNGAP1-206ENST00000479510 PITPNM3Q9BZ71 974 aa25.97■■□□□ 1.75
SYNGAP1-206ENST00000479510 ARHGEF3Q9NR81 526 aa25.97■■□□□ 1.75
SYNGAP1-206ENST00000479510 PIM2Q9P1W9 311 aa25.97■■□□□ 1.75
SYNGAP1-206ENST00000479510 RXRBP28702 533 aa25.96■■□□□ 1.75
SYNGAP1-206ENST00000479510 WDR4P57081 412 aaKnown RBP25.96■■□□□ 1.75
SYNGAP1-206ENST00000479510 CGB2Q6NT52 195 aa25.96■■□□□ 1.75
SYNGAP1-206ENST00000479510 SLC35B2Q8TB61 432 aa25.96■■□□□ 1.75
SYNGAP1-206ENST00000479510 TRABDQ9H4I3 376 aa25.96■■□□□ 1.75
SYNGAP1-206ENST00000479510 BAIAP2L1Q9UHR4 511 aa25.96■■□□□ 1.75
SYNGAP1-206ENST00000479510 FOXO6A8MYZ6 492 aa25.95■■□□□ 1.75
SYNGAP1-206ENST00000479510 MAFO75444 373 aaPredicted RBP25.95■■□□□ 1.75
SYNGAP1-206ENST00000479510 ATP5HO75947 161 aa25.95■■□□□ 1.75
SYNGAP1-206ENST00000479510 EDN1P05305 212 aa25.95■■□□□ 1.75
SYNGAP1-206ENST00000479510 FOXN2P32314 431 aa25.95■■□□□ 1.75
SYNGAP1-206ENST00000479510 SF3A3Q12874 501 aaKnown RBP eCLIP25.95■■□□□ 1.75
SYNGAP1-206ENST00000479510 DUOXA2Q1HG44 320 aa25.95■■□□□ 1.75
SYNGAP1-206ENST00000479510 ZC3H12AQ5D1E8 599 aaKnown RBP25.95■■□□□ 1.75
SYNGAP1-206ENST00000479510 ASRGL1Q7L266 308 aa25.95■■□□□ 1.75
SYNGAP1-206ENST00000479510 PNMA8AQ86V59 439 aaPredicted RBP25.95■■□□□ 1.75
SYNGAP1-206ENST00000479510 FITM2Q8N6M3 262 aa25.95■■□□□ 1.75
SYNGAP1-206ENST00000479510 TTC13Q8NBP0 860 aa25.95■■□□□ 1.75
SYNGAP1-206ENST00000479510 KLHL29Q96CT2 875 aa25.95■■□□□ 1.75
SYNGAP1-206ENST00000479510 CISHQ9NSE2 258 aa25.95■■□□□ 1.75
SYNGAP1-206ENST00000479510 KLHL11Q9NVR0 708 aa25.95■■□□□ 1.75
SYNGAP1-206ENST00000479510 F8VP50 259 aa25.95■■□□□ 1.74
SYNGAP1-206ENST00000479510 SMAPO00193 183 aa25.95■■□□□ 1.74
SYNGAP1-206ENST00000479510 TCF4P15884 667 aa25.95■■□□□ 1.74
SYNGAP1-206ENST00000479510 SSTR3P32745 418 aaPredicted RBP25.95■■□□□ 1.74
SYNGAP1-206ENST00000479510 ZKSCAN8Q15776 578 aaPredicted RBP25.95■■□□□ 1.74
SYNGAP1-206ENST00000479510 ERICH1Q86X53 443 aa25.95■■□□□ 1.74
SYNGAP1-206ENST00000479510 GLIS1Q8NBF1 620 aa25.95■■□□□ 1.74
SYNGAP1-206ENST00000479510 SMC6Q96SB8 1091 aa25.95■■□□□ 1.74
SYNGAP1-206ENST00000479510 OGTO15294 1046 aa25.94■■□□□ 1.74
SYNGAP1-206ENST00000479510 GAS2O43903 313 aaKnown RBP25.94■■□□□ 1.74
SYNGAP1-206ENST00000479510 POLR2BP30876 1174 aaKnown RBP25.94■■□□□ 1.74
SYNGAP1-206ENST00000479510 OGDHQ02218 1023 aa25.94■■□□□ 1.74
SYNGAP1-206ENST00000479510 GPAT2Q6NUI2 795 aa25.94■■□□□ 1.74
SYNGAP1-206ENST00000479510 PRUNE1Q86TP1 453 aa25.94■■□□□ 1.74
SYNGAP1-206ENST00000479510 MICALL2Q8IY33 904 aa25.94■■□□□ 1.74
SYNGAP1-206ENST00000479510 FNIP1Q8TF40 1166 aa25.94■■□□□ 1.74
SYNGAP1-206ENST00000479510 IGF2BP3O00425 579 aaKnown RBP eCLIP25.94■■□□□ 1.74
SYNGAP1-206ENST00000479510 CST3P01034 146 aaPredicted RBP25.94■■□□□ 1.74
SYNGAP1-206ENST00000479510 KRT7P08729 469 aa25.94■■□□□ 1.74
SYNGAP1-206ENST00000479510 CDCA2Q69YH5 1023 aaPredicted RBP25.94■■□□□ 1.74
SYNGAP1-206ENST00000479510 EXOC8Q8IYI6 725 aa25.94■■□□□ 1.74
SYNGAP1-206ENST00000479510 FBF1Q8TES7 1133 aa25.94■■□□□ 1.74
SYNGAP1-206ENST00000479510 PRCCQ92733 491 aaPredicted RBP25.94■■□□□ 1.74
SYNGAP1-206ENST00000479510 FAM167AQ96KS9 214 aa25.94■■□□□ 1.74
SYNGAP1-206ENST00000479510 LHX5Q9H2C1 402 aa25.94■■□□□ 1.74
SYNGAP1-206ENST00000479510 PSMC3IPQ9P2W1 217 aaPredicted RBP25.94■■□□□ 1.74
SYNGAP1-206ENST00000479510 LRRD1A4D1F6 860 aa25.93■■□□□ 1.74
SYNGAP1-206ENST00000479510 SPDYE16A6NNV3 312 aaPredicted RBP25.93■■□□□ 1.74
SYNGAP1-206ENST00000479510 MSCO60682 206 aa25.93■■□□□ 1.74
SYNGAP1-206ENST00000479510 BRD2P25440 801 aaKnown RBP25.93■■□□□ 1.74
SYNGAP1-206ENST00000479510 MYL6P60660 151 aa25.93■■□□□ 1.74
SYNGAP1-206ENST00000479510 PDK4Q16654 411 aa25.93■■□□□ 1.74
SYNGAP1-206ENST00000479510 WDR72Q3MJ13 1102 aa25.93■■□□□ 1.74
SYNGAP1-206ENST00000479510 IER5Q5VY09 327 aa25.93■■□□□ 1.74
SYNGAP1-206ENST00000479510 GIMAP7Q8NHV1 300 aa25.93■■□□□ 1.74
SYNGAP1-206ENST00000479510 FAXDC2Q96IV6 333 aa25.93■■□□□ 1.74
SYNGAP1-206ENST00000479510 TXLNGQ9NUQ3 528 aa25.93■■□□□ 1.74
SYNGAP1-206ENST00000479510 FARP1Q9Y4F1 1045 aaPredicted RBP25.93■■□□□ 1.74
SYNGAP1-206ENST00000479510 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.93■■□□□ 1.74
SYNGAP1-206ENST00000479510 LCTP09848 1927 aa25.93■■□□□ 1.74
SYNGAP1-206ENST00000479510 ZSCAN5DPP0CG00 497 aa25.92■■□□□ 1.74
SYNGAP1-206ENST00000479510 TSHRP16473 764 aa25.92■■□□□ 1.74
SYNGAP1-206ENST00000479510 NF2P35240 595 aa25.92■■□□□ 1.74
SYNGAP1-206ENST00000479510 KCNJ2P63252 427 aa25.92■■□□□ 1.74
SYNGAP1-206ENST00000479510 TAZQ16635 292 aa25.92■■□□□ 1.74
SYNGAP1-206ENST00000479510 EFHC2Q5JST6 749 aa25.92■■□□□ 1.74
SYNGAP1-206ENST00000479510 RMDN2Q96LZ7 410 aa25.92■■□□□ 1.74
SYNGAP1-206ENST00000479510 PCYT2Q99447 389 aa25.92■■□□□ 1.74
SYNGAP1-206ENST00000479510 VPS37BQ9H9H4 285 aa25.92■■□□□ 1.74
SYNGAP1-206ENST00000479510 SIGLEC16A6NMB1 481 aa25.92■■□□□ 1.74
SYNGAP1-206ENST00000479510 FARP2O94887 1054 aaPredicted RBP25.92■■□□□ 1.74
SYNGAP1-206ENST00000479510 PHBP35232 272 aa25.92■■□□□ 1.74
SYNGAP1-206ENST00000479510 STAT5BP51692 787 aa25.92■■□□□ 1.74
SYNGAP1-206ENST00000479510 TRPC3Q13507 836 aa25.92■■□□□ 1.74
SYNGAP1-206ENST00000479510 SEPT14Q6ZU15 432 aa25.92■■□□□ 1.74
SYNGAP1-206ENST00000479510 ECHDC2Q86YB7 292 aa25.92■■□□□ 1.74
SYNGAP1-206ENST00000479510 WDTC1Q8N5D0 677 aa25.92■■□□□ 1.74
SYNGAP1-206ENST00000479510 SLC16A10Q8TF71 515 aa25.92■■□□□ 1.74
SYNGAP1-206ENST00000479510 ACO2Q99798 780 aaKnown RBP25.92■■□□□ 1.74
SYNGAP1-206ENST00000479510 MTMR12Q9C0I1 747 aa25.92■■□□□ 1.74
SYNGAP1-206ENST00000479510 CPSF3Q9UKF6 684 aaKnown RBP25.92■■□□□ 1.74
SYNGAP1-206ENST00000479510 C3orf70A6NLC5 250 aaPredicted RBP25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 SGK1O00141 431 aa25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 KRT15P19012 456 aa25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 UBA1P22314 1058 aaKnown RBP25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 GMPSP49915 693 aaPredicted RBP25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 ALDH5A1P51649 535 aaPredicted RBP25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 YARSP54577 528 aaKnown RBP25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 EN1Q05925 392 aaPredicted RBP25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 SETDB1Q15047 1291 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms