RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 CD19P15391 556 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 PECAM1P16284 738 aaPredicted RBP11.42□□□□□ -0.58
VPS52-217ENST00000478934 MAGEA4P43358 317 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 PLCB3Q01970 1234 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 C1QBPQ07021 282 aaKnown RBP11.42□□□□□ -0.58
VPS52-217ENST00000478934 PWP2Q15269 919 aaKnown RBP11.42□□□□□ -0.58
VPS52-217ENST00000478934 WDR72Q3MJ13 1102 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 DNAJC24Q6P3W2 148 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 DPH6Q7L8W6 267 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 GRK7Q8WTQ7 553 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 CLMNQ96JQ2 1002 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 RMDN2Q96LZ7 410 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 SERPINB12Q96P63 405 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 ROPN1BQ9BZX4 212 aaPredicted RBP11.42□□□□□ -0.58
VPS52-217ENST00000478934 ROPN1Q9HAT0 212 aaPredicted RBP11.42□□□□□ -0.58
VPS52-217ENST00000478934 TXNRD2Q9NNW7 524 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 NRBP2Q9NSY0 501 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 ADM5C9JUS6 153 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 POC1B-GALNT4F8VUJ3 575 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 ABLIM1O14639 778 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 CHUKO15111 745 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 PRKCBP05771 671 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 RPSAP08865 295 aaKnown RBP11.41□□□□□ -0.58
VPS52-217ENST00000478934 HOXC6P09630 235 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 IL1R2P27930 398 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 GCAP28676 217 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 CLCN3P51790 818 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 GDF10P55107 478 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 IGBP1P78318 339 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 XRCC4Q13426 336 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 Q3C1V9 767 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 SPOCD1Q6ZMY3 1216 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 ANKMY2Q8IV38 441 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 CCDC63Q8NA47 563 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 TGS1Q96RS0 853 aaKnown RBP11.41□□□□□ -0.58
VPS52-217ENST00000478934 PDGFCQ9NRA1 345 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 IP6K2Q9UHH9 426 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 STK38LQ9Y2H1 464 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 INO80B-WBP1J3KQ70 363 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 SOCS7O14512 581 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 IRF6O14896 467 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 TOM1L1O75674 476 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 STAM2O75886 525 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 ECM2O94769 699 aaPredicted RBP11.41□□□□□ -0.58
VPS52-217ENST00000478934 POTEJP0CG39 1038 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 CXCL8P10145 99 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 TBXAS1P24557 533 aaPredicted RBP11.41□□□□□ -0.58
VPS52-217ENST00000478934 ASPAP45381 313 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 ACCSLQ4AC99 568 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 PTPN20Q4JDL3 420 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 CGB2Q6NT52 195 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 TRIM72Q6ZMU5 477 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.41□□□□□ -0.58
VPS52-217ENST00000478934 FBXO16Q8IX29 292 aaPredicted RBP11.41□□□□□ -0.58
VPS52-217ENST00000478934 CCDC89Q8N998 374 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 DNERQ8NFT8 737 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 SLC16A10Q8TF71 515 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 SEPT1Q8WYJ6 367 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 TWNKQ96RR1 684 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 IMPG2Q9BZV3 1241 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 INO80BQ9C086 356 aaPredicted RBP11.41□□□□□ -0.58
VPS52-217ENST00000478934 SPATC1LQ9H0A9 340 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 SDCBP2Q9H190 292 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 XYLT2Q9H1B5 865 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 TMEM134Q9H6X4 195 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 HOMER3Q9NSC5 361 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 GPRC5DQ9NZD1 345 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 PCSK1NQ9UHG2 260 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 SLC12A4Q9UP95 1085 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 SCINQ9Y6U3 715 aa11.41□□□□□ -0.58
VPS52-217ENST00000478934 FOXN2P32314 431 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 STX2P32856 288 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 MAP2K2P36507 400 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 MGAT5Q09328 741 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 TRPC3Q13507 836 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 TMEM132AQ24JP5 1023 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 ZNF699Q32M78 642 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 WDR78Q5VTH9 848 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 ERICH1Q86X53 443 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 APOBEC3FQ8IUX4 373 aaKnown RBP11.4□□□□□ -0.58
VPS52-217ENST00000478934 CHST13Q8NET6 341 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 LRRN4Q8WUT4 740 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 MAIP1Q8WWC4 291 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 OTUD5Q96G74 571 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 VCPIP1Q96JH7 1222 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 MRPL4Q9BYD3 311 aaKnown RBP11.4□□□□□ -0.58
VPS52-217ENST00000478934 ELP3Q9H9T3 547 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 CPSF3Q9UKF6 684 aaKnown RBP11.4□□□□□ -0.58
VPS52-217ENST00000478934 ATP6V1G2O95670 118 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 EFTUD2Q15029 972 aaKnown RBP eCLIP11.4□□□□□ -0.581e-6■■■■□ 22.8
VPS52-217ENST00000478934 DUOXA2Q1HG44 320 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 SH3PXD2AQ5TCZ1 1133 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 ANKRD22Q5VYY1 191 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 CCDC91Q7Z6B0 441 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 WDR49Q8IV35 697 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 C4orf33Q8N1A6 199 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 FITM2Q8N6M3 262 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 FGD4Q96M96 766 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 NIF3L1Q9GZT8 377 aa11.4□□□□□ -0.58
VPS52-217ENST00000478934 STMN4Q9H169 189 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms