RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 A0A1B0GTW7 788 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 ZNF24P17028 368 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 SLC16A2P36021 539 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 CD151P48509 253 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 HSPA2P54652 639 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 PPP3CAQ08209 521 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 KLF1Q13351 362 aaPredicted RBP10.34□□□□□ -0.75
COL13A1-207ENST00000478219 ACAP1Q15027 740 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 CCDC174Q6PII3 467 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 FBXO33Q7Z6M2 555 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 BANPQ8N9N5 519 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 ZSWIM2Q8NEG5 633 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 DIS3LQ8TF46 1054 aaKnown RBP10.34□□□□□ -0.75
COL13A1-207ENST00000478219 PRPF31Q8WWY3 499 aaKnown RBP10.34□□□□□ -0.75
COL13A1-207ENST00000478219 LZICQ8WZA0 190 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 P2RX7Q99572 595 aaKnown RBP10.34□□□□□ -0.75
COL13A1-207ENST00000478219 EPB41L1Q9H4G0 881 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 SMYD3Q9H7B4 428 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 LIN28AQ9H9Z2 209 aaKnown RBP10.34□□□□□ -0.75
COL13A1-207ENST00000478219 ATRNL1Q5VV63 1379 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 CLUHO75153 1309 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 EML1O00423 815 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 CIB2O75838 187 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 CAMTA2O94983 1202 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 CDK8P49336 464 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 PHEXP78562 749 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 SLC25A3Q00325 362 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 FOLH1Q04609 750 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 UBAP2LQ14157 1087 aaKnown RBP10.34□□□□□ -0.75
COL13A1-207ENST00000478219 TFDP1Q14186 410 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 CCDC142Q17RM4 750 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 EPC2Q52LR7 807 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 RALGPS1Q5JS13 557 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 FAM182AQ5T1J6 154 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 SYDE1Q6ZW31 735 aaPredicted RBP10.34□□□□□ -0.75
COL13A1-207ENST00000478219 GSTA5Q7RTV2 222 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 TMC7Q7Z402 723 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 RNF168Q8IYW5 571 aaPredicted RBP10.34□□□□□ -0.75
COL13A1-207ENST00000478219 SMYD1Q8NB12 490 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 RPGRQ92834 1020 aaKnown RBP10.34□□□□□ -0.75
COL13A1-207ENST00000478219 TTC17Q96AE7 1141 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 RANBP17Q9H2T7 1088 aaKnown RBP10.34□□□□□ -0.75
COL13A1-207ENST00000478219 PFDN4Q9NQP4 134 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 KLHL11Q9NVR0 708 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 BTBD7Q9P203 1132 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 PPARGC1AQ9UBK2 798 aaKnown RBP10.34□□□□□ -0.75
COL13A1-207ENST00000478219 MARCOQ9UEW3 520 aaPredicted RBP10.34□□□□□ -0.75
COL13A1-207ENST00000478219 ANAPC7Q9UJX3 599 aa10.34□□□□□ -0.75
COL13A1-207ENST00000478219 CAPN8A6NHC0 703 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 TTLL13PA6NNM8 815 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 PRR5-ARHGAP8B1AHC4 643 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 ERVV-1B6SEH8 477 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 H3BSA7 217 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 VIL1P09327 827 aaKnown RBP10.33□□□□□ -0.76
COL13A1-207ENST00000478219 COL6A2P12110 1019 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 IL2RBP14784 551 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 CCR3P51677 355 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 ARHGAP8P85298 464 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 CYLC2Q14093 348 aaPredicted RBP10.33□□□□□ -0.76
COL13A1-207ENST00000478219 CCNIQ14094 377 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 SEPT7Q16181 437 aaKnown RBP10.33□□□□□ -0.76
COL13A1-207ENST00000478219 ANKRD20A4Q4UJ75 823 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 PRPF39Q86UA1 669 aaKnown RBP10.33□□□□□ -0.76
COL13A1-207ENST00000478219 SLC15A3Q8IY34 581 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 ARHGAP24Q8N264 748 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 ARL10Q8N8L6 244 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 CCDC89Q8N998 374 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 ETNPPLQ8TBG4 499 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 WDR66Q8TBY9 1149 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 SLC26A7Q8TE54 656 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 MORC4Q8TE76 937 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 GRK7Q8WTQ7 553 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 CELF1Q92879 486 aaKnown RBP10.33□□□□□ -0.76
COL13A1-207ENST00000478219 FAM111AQ96PZ2 611 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 CORO1BQ9BR76 489 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 WDR83Q9BRX9 315 aaKnown RBP10.33□□□□□ -0.76
COL13A1-207ENST00000478219 MECRQ9BV79 373 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 JMJD4Q9H9V9 463 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 SENP1Q9P0U3 644 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 PSMC3IPQ9P2W1 217 aaPredicted RBP10.33□□□□□ -0.76
COL13A1-207ENST00000478219 DNM3Q9UQ16 869 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 LZTS1Q9Y250 596 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 EMSYQ7Z589 1322 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 TRIM43BA6NCK2 446 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 PDE5AO76074 875 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 NTSR2O95665 410 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 CLPTM1O96005 669 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 KITP10721 976 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 GJC1P36383 396 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 CPOXP36551 454 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 RPL5P46777 297 aaKnown RBP10.33□□□□□ -0.76
COL13A1-207ENST00000478219 GCLMP48507 274 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 CD97P48960 835 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 GSTM4Q03013 218 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 DCTN2Q13561 401 aaKnown RBP10.33□□□□□ -0.76
COL13A1-207ENST00000478219 ALCAMQ13740 583 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 ITGA9Q13797 1035 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 MSS51Q4VC12 460 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 TAB3Q8N5C8 712 aaPredicted RBP10.33□□□□□ -0.76
COL13A1-207ENST00000478219 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms