RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 GDE1Q9NZC3 331 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 LIMCH1Q9UPQ0 1083 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 DNM3Q9UQ16 869 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 BACE2Q9Y5Z0 518 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 NUMBLQ9Y6R0 609 aa7.95□□□□□ -1.14
BRCA1-214ENST00000477152 LAMTOR5O43504 91 aa7.94□□□□□ -1.14
BRCA1-214ENST00000477152 PI15O43692 258 aa7.94□□□□□ -1.14
BRCA1-214ENST00000477152 USP17L7P0C7H9 530 aa7.94□□□□□ -1.14
BRCA1-214ENST00000477152 FDPSP14324 419 aaKnown RBP7.94□□□□□ -1.14
BRCA1-214ENST00000477152 PTPN2P17706 415 aa7.94□□□□□ -1.14
BRCA1-214ENST00000477152 SCP2P22307 547 aa7.94□□□□□ -1.14
BRCA1-214ENST00000477152 STRN3Q13033 797 aa7.94□□□□□ -1.14
BRCA1-214ENST00000477152 PABPC1LQ4VXU2 614 aaKnown RBP7.94□□□□□ -1.14
BRCA1-214ENST00000477152 EARS2Q5JPH6 523 aaKnown RBP7.94□□□□□ -1.14
BRCA1-214ENST00000477152 SPECC1Q5M775 1068 aa7.94□□□□□ -1.14
BRCA1-214ENST00000477152 TTC38Q5R3I4 469 aa7.94□□□□□ -1.14
BRCA1-214ENST00000477152 KRT79Q5XKE5 535 aa7.94□□□□□ -1.14
BRCA1-214ENST00000477152 IQCEQ6IPM2 695 aa7.94□□□□□ -1.14
BRCA1-214ENST00000477152 PRSS55Q6UWB4 352 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-214ENST00000477152 LEMD2Q8NC56 503 aa7.94□□□□□ -1.14
BRCA1-214ENST00000477152 GLIS3Q8NEA6 775 aa7.94□□□□□ -1.14
BRCA1-214ENST00000477152 GSTCDQ8NEC7 633 aa7.94□□□□□ -1.14
BRCA1-214ENST00000477152 TCHPQ9BT92 498 aa7.94□□□□□ -1.14
BRCA1-214ENST00000477152 IER2Q9BTL4 223 aa7.94□□□□□ -1.14
BRCA1-214ENST00000477152 SH2B1Q9NRF2 756 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-214ENST00000477152 LRWD1Q9UFC0 647 aa7.94□□□□□ -1.14
BRCA1-214ENST00000477152 FBXO4Q9UKT5 387 aa7.94□□□□□ -1.14
BRCA1-214ENST00000477152 TNFSF13BQ9Y275 285 aa7.94□□□□□ -1.14
BRCA1-214ENST00000477152 GDAQ9Y2T3 454 aa7.94□□□□□ -1.14
BRCA1-214ENST00000477152 MRPS23Q9Y3D9 190 aaKnown RBP7.94□□□□□ -1.14
BRCA1-214ENST00000477152 NUB1Q9Y5A7 615 aa7.94□□□□□ -1.14
BRCA1-214ENST00000477152 MYH15Q9Y2K3 1946 aa7.94□□□□□ -1.14
BRCA1-214ENST00000477152 KANSL1LA0AUZ9 987 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 ARHGEF37A1IGU5 675 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 KRBA1A5PL33 1030 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 CCDC169A6NNP5 214 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 METTL12A8MUP2 240 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 MAN2B1O00754 1011 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 PRRG1O14668 218 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 SYN3O14994 580 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 XPOTO43592 962 aaKnown RBP7.93□□□□□ -1.14
BRCA1-214ENST00000477152 NARSO43776 548 aaKnown RBP7.93□□□□□ -1.14
BRCA1-214ENST00000477152 MED24O75448 989 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 KIF4AO95239 1232 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 SPATA31C1P0DKV0 1188 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 MYBP10242 640 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 RPL17P18621 184 aaKnown RBP7.93□□□□□ -1.14
BRCA1-214ENST00000477152 MARCKSP29966 332 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-214ENST00000477152 RPL9P32969 192 aaKnown RBP7.93□□□□□ -1.14
BRCA1-214ENST00000477152 ABCD1P33897 745 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 OR1D2P34982 312 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 MLF2Q15773 248 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-214ENST00000477152 KYAT1Q16773 422 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 ZNF528Q3MIS6 628 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 RTP2Q5QGT7 225 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 C1orf228Q6PIY5 440 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 SYT9Q86SS6 491 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 CDR2LQ86X02 465 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-214ENST00000477152 NT5DC4Q86YG4 428 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 NOSTRINQ8IVI9 506 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 APPL2Q8NEU8 664 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 PJA1Q8NG27 643 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 SLC7A14Q8TBB6 771 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 HASPINQ8TF76 798 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 RSAD2Q8WXG1 361 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 E2F7Q96AV8 911 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 CRELD1Q96HD1 420 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 ACAP3Q96P50 834 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 CLSTN3Q9BQT9 956 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 GPRC5CQ9NQ84 441 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 AVENQ9NQS1 362 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-214ENST00000477152 SPATA6Q9NWH7 488 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-214ENST00000477152 MTRRQ9UBK8 725 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 DOCK8Q8NF50 2099 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 C5orf42Q9H799 3197 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 CCL16O15467 120 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 N4BP1O75113 896 aaKnown RBP7.93□□□□□ -1.14
BRCA1-214ENST00000477152 PAX3P23760 479 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 NRLP54845 237 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 PLD1Q13393 1074 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 ZNF174Q15697 407 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 ZNF568Q3ZCX4 644 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 SLC44A4Q53GD3 710 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 ZBTB41Q5SVQ8 909 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 CYP4A22Q5TCH4 519 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 TPGS2Q68CL5 300 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 ZNF852Q6ZMS4 543 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 ZNF461Q8TAF7 563 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 ATRIPQ8WXE1 791 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 RUBCNQ92622 972 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 DNASE1L2Q92874 299 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 FGF13Q92913 245 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 B3GALT6Q96L58 329 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 FAM126AQ9BYI3 521 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-214ENST00000477152 GPR88Q9GZN0 384 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 KMT5AQ9NQR1 393 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 PPP4R2Q9NY27 417 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 CDY1Q9Y6F8 540 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 CITO14578 2027 aa7.93□□□□□ -1.14
BRCA1-214ENST00000477152 PTGESO14684 152 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms