RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 TOX2Q96NM4 488 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 PSMB7Q99436 277 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 NUP85Q9BW27 656 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 TRIM7Q9C029 511 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 LHX5Q9H2C1 402 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 HIPK3Q9H422 1215 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 UBN1Q9NPG3 1134 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 TJP2Q9UDY2 1190 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.36■□□□□ 0.05
COL4A6-206ENST00000477085 UQCRHLA0A096LP55 91 aa15.35■□□□□ 0.05
COL4A6-206ENST00000477085 CTIFO43310 598 aaKnown RBP15.35■□□□□ 0.05
COL4A6-206ENST00000477085 LSM8O95777 96 aaKnown RBP15.35■□□□□ 0.05
COL4A6-206ENST00000477085 UQCRHP07919 91 aa15.35■□□□□ 0.05
COL4A6-206ENST00000477085 PFKMP08237 780 aa15.35■□□□□ 0.05
COL4A6-206ENST00000477085 PDGFRBP09619 1106 aa15.35■□□□□ 0.05
COL4A6-206ENST00000477085 HSPA1AP0DMV8 641 aaKnown RBP15.35■□□□□ 0.05
COL4A6-206ENST00000477085 HSPA1BP0DMV9 641 aaKnown RBP15.35■□□□□ 0.05
COL4A6-206ENST00000477085 CRIPAKQ8N1N5 446 aa15.35■□□□□ 0.05
COL4A6-206ENST00000477085 OR6B3Q8NGW1 331 aa15.35■□□□□ 0.05
COL4A6-206ENST00000477085 FTHL17Q9BXU8 183 aa15.35■□□□□ 0.05
COL4A6-206ENST00000477085 PPP1R12CQ9BZL4 782 aa15.35■□□□□ 0.05
COL4A6-206ENST00000477085 ADAM22Q9P0K1 906 aa15.35■□□□□ 0.05
COL4A6-206ENST00000477085 PCDH10Q9P2E7 1040 aa15.35■□□□□ 0.05
COL4A6-206ENST00000477085 MYH10P35580 1976 aa15.35■□□□□ 0.05
COL4A6-206ENST00000477085 TCRBV5S1A1TA0A578 114 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 DCDC2CA8MYV0 355 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 F8W810 466 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 PDE2AO00408 941 aaPredicted RBP15.34■□□□□ 0.05
COL4A6-206ENST00000477085 CYB561D2O14569 222 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 DDHD2O94830 711 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 GJB6O95452 261 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 PRLRP16471 622 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 RPL9P32969 192 aaKnown RBP15.34■□□□□ 0.05
COL4A6-206ENST00000477085 GNL1P36915 607 aaPredicted RBP15.34■□□□□ 0.05
COL4A6-206ENST00000477085 GPD2P43304 727 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 C1QBPQ07021 282 aaKnown RBP15.34■□□□□ 0.05
COL4A6-206ENST00000477085 PKN2Q16513 984 aaKnown RBP15.34■□□□□ 0.05
COL4A6-206ENST00000477085 IFI16Q16666 785 aaKnown RBP15.34■□□□□ 0.05
COL4A6-206ENST00000477085 PPP1R26Q5T8A7 1209 aaPredicted RBP15.34■□□□□ 0.05
COL4A6-206ENST00000477085 WSCD1Q658N2 575 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 DPH6Q7L8W6 267 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 DAAM2Q86T65 1068 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 ZNF280BQ86YH2 543 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 CREG2Q8IUH2 290 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 TTC39CQ8N584 583 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 TMEM35BQ8NCS4 154 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 APPL2Q8NEU8 664 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 UBA3Q8TBC4 463 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 PAWRQ96IZ0 340 aaKnown RBP15.34■□□□□ 0.05
COL4A6-206ENST00000477085 SENP8Q96LD8 212 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 OSBPL9Q96SU4 736 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 AVENQ9NQS1 362 aaPredicted RBP15.34■□□□□ 0.05
COL4A6-206ENST00000477085 TBX21Q9UL17 535 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.34■□□□□ 0.05
COL4A6-206ENST00000477085 A8MXQ7 604 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 GABRDO14764 452 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 MED7O43513 233 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 CXCL10P02778 98 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 AARSP49588 968 aaKnown RBP eCLIP15.34■□□□□ 0.05
COL4A6-206ENST00000477085 GRIK3Q13003 919 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 MAMLD1Q13495 774 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 CCDC142Q17RM4 750 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 LRRC26Q2I0M4 334 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 PTPN20Q4JDL3 420 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 TIGD5Q53EQ6 642 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 SGO2Q562F6 1265 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 KIAA0319Q5VV43 1072 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 PLEKHA7Q6IQ23 1121 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 LCLAT1Q6UWP7 414 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 UNC93AQ86WB7 457 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 ADGRF2Q8IZF7 708 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 CRYBG2Q8N1P7 616 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 TOP6BLQ8N6T0 577 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 ZNF564Q8TBZ8 553 aaPredicted RBP15.34■□□□□ 0.05
COL4A6-206ENST00000477085 VCPIP1Q96JH7 1222 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 ZNF518BQ9C0D4 1074 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 KIAA1257Q9ULG3 409 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 ALG6Q9Y672 507 aa15.34■□□□□ 0.05
COL4A6-206ENST00000477085 I3L4J1 428 aa15.33■□□□□ 0.04
COL4A6-206ENST00000477085 HUS1O60921 280 aa15.33■□□□□ 0.04
COL4A6-206ENST00000477085 ITGB1P05556 798 aa15.33■□□□□ 0.04
COL4A6-206ENST00000477085 MYBL1P10243 752 aa15.33■□□□□ 0.04
COL4A6-206ENST00000477085 WARSP23381 471 aaKnown RBP15.33■□□□□ 0.04
COL4A6-206ENST00000477085 CTCFP49711 727 aaPredicted RBP15.33■□□□□ 0.04
COL4A6-206ENST00000477085 DNA2P51530 1060 aa15.33■□□□□ 0.04
COL4A6-206ENST00000477085 TUSC3Q13454 348 aa15.33■□□□□ 0.04
COL4A6-206ENST00000477085 TUBB2AQ13885 445 aa15.33■□□□□ 0.04
COL4A6-206ENST00000477085 PAN2Q504Q3 1202 aaKnown RBP15.33■□□□□ 0.04
COL4A6-206ENST00000477085 PKDCCQ504Y2 493 aa15.33■□□□□ 0.04
COL4A6-206ENST00000477085 SEPT8Q92599 483 aa15.33■□□□□ 0.04
COL4A6-206ENST00000477085 CAPZA3Q96KX2 299 aa15.33■□□□□ 0.04
COL4A6-206ENST00000477085 CPXM1Q96SM3 734 aa15.33■□□□□ 0.04
COL4A6-206ENST00000477085 TUBB2BQ9BVA1 445 aa15.33■□□□□ 0.04
COL4A6-206ENST00000477085 FAM49BQ9NUQ9 324 aa15.33■□□□□ 0.04
COL4A6-206ENST00000477085 UVRAGQ9P2Y5 699 aa15.33■□□□□ 0.04
COL4A6-206ENST00000477085 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.33■□□□□ 0.04
COL4A6-206ENST00000477085 TSPAN16Q9UKR8 245 aa15.33■□□□□ 0.04
COL4A6-206ENST00000477085 ATP11BQ9Y2G3 1177 aa15.33■□□□□ 0.04
COL4A6-206ENST00000477085 TIMM13Q9Y5L4 95 aaPredicted RBP15.33■□□□□ 0.04
COL4A6-206ENST00000477085 V9GYY5 206 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms