RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 BCO2Q9BYV7 579 aa17.44■□□□□ 0.38
COL1A1-205ENST00000476387 GOLPH3LQ9H4A5 285 aa17.44■□□□□ 0.38
COL1A1-205ENST00000476387 ITGA11Q9UKX5 1188 aa17.44■□□□□ 0.38
COL1A1-205ENST00000476387 ASB3Q9Y575 518 aa17.44■□□□□ 0.38
COL1A1-205ENST00000476387 EP300Q09472 2414 aaPredicted RBP17.44■□□□□ 0.38
COL1A1-205ENST00000476387 MIA3Q5JRA6 1907 aa17.44■□□□□ 0.38
COL1A1-205ENST00000476387 WDR87Q6ZQQ6 2873 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 MTMR11A4FU01 709 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 FAM170BA6NMN3 283 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 NRG2O14511 850 aaPredicted RBP17.43■□□□□ 0.38
COL1A1-205ENST00000476387 CYB561D2O14569 222 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 CLIC2O15247 247 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 ZNF202O95125 648 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 TNNC2P02585 160 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 KRT19P08727 400 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 POLR2BP30876 1174 aaKnown RBP17.43■□□□□ 0.38
COL1A1-205ENST00000476387 UBXN2BQ14CS0 331 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 SNRNP35Q16560 246 aaKnown RBP17.43■□□□□ 0.38
COL1A1-205ENST00000476387 ZC3H14Q6PJT7 736 aaKnown RBP17.43■□□□□ 0.38
COL1A1-205ENST00000476387 ZNF852Q6ZMS4 543 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 TPRG1Q6ZUI0 275 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 XXYLT1Q8NBI6 393 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 SHKBP1Q8TBC3 707 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 DEPDC1BQ8WUY9 529 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 E2F7Q96AV8 911 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 ZSWIM3Q96MP5 696 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 TRMT61BQ9BVS5 477 aaKnown RBP17.43■□□□□ 0.38
COL1A1-205ENST00000476387 LRRC3Q9BY71 257 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 MTMR12Q9C0I1 747 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 DNAJC25Q9H1X3 360 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 CRISPLD1Q9H336 500 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 LTB4R2Q9NPC1 389 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 TRPV5Q9NQA5 729 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 AGAP1Q9UPQ3 857 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 MRPS17Q9Y2R5 130 aaKnown RBP17.43■□□□□ 0.38
COL1A1-205ENST00000476387 SPTBN4Q9H254 2564 aa17.43■□□□□ 0.38
COL1A1-205ENST00000476387 KPNA7A9QM74 516 aa17.42■□□□□ 0.38
COL1A1-205ENST00000476387 LRRN2O75325 713 aa17.42■□□□□ 0.38
COL1A1-205ENST00000476387 FGF19O95750 216 aa17.42■□□□□ 0.38
COL1A1-205ENST00000476387 PRR29P0C7W0 189 aa17.42■□□□□ 0.38
COL1A1-205ENST00000476387 SP9P0CG40 484 aa17.42■□□□□ 0.38
COL1A1-205ENST00000476387 PSMC3P17980 439 aa17.42■□□□□ 0.38
COL1A1-205ENST00000476387 SMARCB1Q12824 385 aa17.42■□□□□ 0.38
COL1A1-205ENST00000476387 STK4Q13043 487 aa17.42■□□□□ 0.38
COL1A1-205ENST00000476387 TMC8Q8IU68 726 aa17.42■□□□□ 0.38
COL1A1-205ENST00000476387 C12orf56Q8IXR9 622 aa17.42■□□□□ 0.38
COL1A1-205ENST00000476387 CSGALNACT2Q8N6G5 542 aa17.42■□□□□ 0.38
COL1A1-205ENST00000476387 LRRC52Q8N7C0 313 aa17.42■□□□□ 0.38
COL1A1-205ENST00000476387 C1orf127Q8N9H9 656 aa17.42■□□□□ 0.38
COL1A1-205ENST00000476387 RDH13Q8NBN7 331 aa17.42■□□□□ 0.38
COL1A1-205ENST00000476387 ATAD1Q8NBU5 361 aa17.42■□□□□ 0.38
COL1A1-205ENST00000476387 KIAA0895Q8NCT3 520 aa17.42■□□□□ 0.38
COL1A1-205ENST00000476387 OR10T2Q8NGX3 314 aa17.42■□□□□ 0.38
COL1A1-205ENST00000476387 ZSCAN18Q8TBC5 510 aaPredicted RBP17.42■□□□□ 0.38
COL1A1-205ENST00000476387 IRF7Q92985 503 aa17.42■□□□□ 0.38
COL1A1-205ENST00000476387 CLDN23Q96B33 292 aa17.42■□□□□ 0.38
COL1A1-205ENST00000476387 FNBP1Q96RU3 617 aa17.42■□□□□ 0.38
COL1A1-205ENST00000476387 BRD9Q9H8M2 597 aa17.42■□□□□ 0.38
COL1A1-205ENST00000476387 INTS13Q9NVM9 706 aa17.42■□□□□ 0.38
COL1A1-205ENST00000476387 MTF2Q9Y483 593 aaPredicted RBP17.42■□□□□ 0.38
COL1A1-205ENST00000476387 ZNF292O60281 2723 aa17.41■□□□□ 0.38
COL1A1-205ENST00000476387 NCAM2O15394 837 aa17.41■□□□□ 0.38
COL1A1-205ENST00000476387 KIF20AO95235 890 aa17.41■□□□□ 0.38
COL1A1-205ENST00000476387 RPS9P46781 194 aaKnown RBP17.41■□□□□ 0.38
COL1A1-205ENST00000476387 RBP5P82980 135 aa17.41■□□□□ 0.38
COL1A1-205ENST00000476387 BFSP1Q12934 665 aa17.41■□□□□ 0.38
COL1A1-205ENST00000476387 GRM2Q14416 872 aa17.41■□□□□ 0.38
COL1A1-205ENST00000476387 TEAD2Q15562 447 aa17.41■□□□□ 0.38
COL1A1-205ENST00000476387 LMBRD2Q68DH5 695 aaPredicted RBP17.41■□□□□ 0.38
COL1A1-205ENST00000476387 VITQ6UXI7 678 aa17.41■□□□□ 0.38
COL1A1-205ENST00000476387 ITIH5Q86UX2 942 aa17.41■□□□□ 0.38
COL1A1-205ENST00000476387 WDR49Q8IV35 697 aa17.41■□□□□ 0.38
COL1A1-205ENST00000476387 THEM5Q8N1Q8 247 aa17.41■□□□□ 0.38
COL1A1-205ENST00000476387 C2orf15Q8WU43 125 aaKnown RBP17.41■□□□□ 0.38
COL1A1-205ENST00000476387 PSMG2Q969U7 264 aa17.41■□□□□ 0.38
COL1A1-205ENST00000476387 TMEM209Q96SK2 561 aa17.41■□□□□ 0.38
COL1A1-205ENST00000476387 ZCWPW1Q9H0M4 648 aa17.41■□□□□ 0.38
COL1A1-205ENST00000476387 SLITRK6Q9H5Y7 841 aa17.41■□□□□ 0.38
COL1A1-205ENST00000476387 HEBP1Q9NRV9 189 aa17.41■□□□□ 0.38
COL1A1-205ENST00000476387 FBXO4Q9UKT5 387 aa17.41■□□□□ 0.38
COL1A1-205ENST00000476387 SLC27A5Q9Y2P5 690 aa17.41■□□□□ 0.38
COL1A1-205ENST00000476387 MAN2B1O00754 1011 aa17.4■□□□□ 0.38
COL1A1-205ENST00000476387 EXOC3O60645 756 aa17.4■□□□□ 0.38
COL1A1-205ENST00000476387 PRPF40AO75400 957 aaKnown RBP17.4■□□□□ 0.38
COL1A1-205ENST00000476387 DLATP10515 647 aaKnown RBP17.4■□□□□ 0.38
COL1A1-205ENST00000476387 GJA1P17302 382 aa17.4■□□□□ 0.38
COL1A1-205ENST00000476387 TNNI1P19237 187 aa17.4■□□□□ 0.38
COL1A1-205ENST00000476387 CD72P21854 359 aa17.4■□□□□ 0.38
COL1A1-205ENST00000476387 TUFMP49411 452 aaKnown RBP17.4■□□□□ 0.38
COL1A1-205ENST00000476387 CYP24A1Q07973 514 aa17.4■□□□□ 0.38
COL1A1-205ENST00000476387 DPYDQ12882 1025 aa17.4■□□□□ 0.38
COL1A1-205ENST00000476387 DUOXA2Q1HG44 320 aa17.4■□□□□ 0.38
COL1A1-205ENST00000476387 ZNF528Q3MIS6 628 aa17.4■□□□□ 0.38
COL1A1-205ENST00000476387 SLC39A12Q504Y0 691 aa17.4■□□□□ 0.38
COL1A1-205ENST00000476387 DNAJB7Q7Z6W7 309 aaPredicted RBP17.4■□□□□ 0.38
COL1A1-205ENST00000476387 MFSD6LQ8IWD5 586 aa17.4■□□□□ 0.38
COL1A1-205ENST00000476387 MAML2Q8IZL2 1156 aaPredicted RBP17.4■□□□□ 0.38
COL1A1-205ENST00000476387 ADSSL1Q8N142 457 aa17.4■□□□□ 0.38
COL1A1-205ENST00000476387 TTC9BQ8N6N2 239 aa17.4■□□□□ 0.38
COL1A1-205ENST00000476387 BORCS6Q96GS4 357 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms