RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 SPRED3Q2MJR0 410 aa17.6■□□□□ 0.41
TVP23B-202ENST00000476139 TLCD1Q96CP7 247 aa17.6■□□□□ 0.41
TVP23B-202ENST00000476139 SMYD3Q9H7B4 428 aa17.6■□□□□ 0.41
TVP23B-202ENST00000476139 CALB1P05937 261 aa17.6■□□□□ 0.41
TVP23B-202ENST00000476139 EIF4BP23588 611 aaKnown RBP17.6■□□□□ 0.41
TVP23B-202ENST00000476139 RFC1P35251 1148 aaPredicted RBP17.6■□□□□ 0.41
TVP23B-202ENST00000476139 LAMC2Q13753 1193 aa17.6■□□□□ 0.41
TVP23B-202ENST00000476139 SLMAPQ14BN4 828 aa17.6■□□□□ 0.41
TVP23B-202ENST00000476139 PTPN20Q4JDL3 420 aa17.6■□□□□ 0.41
TVP23B-202ENST00000476139 RHBDF2Q6PJF5 856 aa17.6■□□□□ 0.41
TVP23B-202ENST00000476139 CPLX4Q7Z7G2 160 aa17.6■□□□□ 0.41
TVP23B-202ENST00000476139 GLIS1Q8NBF1 620 aa17.6■□□□□ 0.41
TVP23B-202ENST00000476139 L3MBTL3Q96JM7 780 aaPredicted RBP17.6■□□□□ 0.41
TVP23B-202ENST00000476139 SCLT1Q96NL6 688 aa17.6■□□□□ 0.41
TVP23B-202ENST00000476139 CDC42EP4Q9H3Q1 356 aaKnown RBP17.6■□□□□ 0.41
TVP23B-202ENST00000476139 WHRNQ9P202 907 aa17.6■□□□□ 0.41
TVP23B-202ENST00000476139 NEU2Q9Y3R4 380 aa17.6■□□□□ 0.41
TVP23B-202ENST00000476139 ASAP2O43150 1006 aa17.59■□□□□ 0.41
TVP23B-202ENST00000476139 LSM8O95777 96 aaKnown RBP17.59■□□□□ 0.41
TVP23B-202ENST00000476139 ARF4P18085 180 aaPredicted RBP17.59■□□□□ 0.41
TVP23B-202ENST00000476139 ITIH2P19823 946 aa17.59■□□□□ 0.41
TVP23B-202ENST00000476139 CCNG2Q16589 344 aa17.59■□□□□ 0.41
TVP23B-202ENST00000476139 PPP1R15BQ5SWA1 713 aa17.59■□□□□ 0.41
TVP23B-202ENST00000476139 MAIP1Q8WWC4 291 aa17.59■□□□□ 0.41
TVP23B-202ENST00000476139 SNF8Q96H20 258 aa17.59■□□□□ 0.41
TVP23B-202ENST00000476139 C16orf70Q9BSU1 422 aa17.59■□□□□ 0.41
TVP23B-202ENST00000476139 MGAMO43451 1857 aa17.59■□□□□ 0.41
TVP23B-202ENST00000476139 GAS8O95995 478 aa17.59■□□□□ 0.41
TVP23B-202ENST00000476139 RAD23BP54727 409 aa17.59■□□□□ 0.41
TVP23B-202ENST00000476139 PTK6Q13882 451 aa17.59■□□□□ 0.41
TVP23B-202ENST00000476139 ZNF667Q5HYK9 610 aa17.59■□□□□ 0.41
TVP23B-202ENST00000476139 HOOK3Q86VS8 718 aa17.59■□□□□ 0.41
TVP23B-202ENST00000476139 SLITRK1Q96PX8 696 aa17.59■□□□□ 0.41
TVP23B-202ENST00000476139 PDZD7Q9H5P4 517 aa17.59■□□□□ 0.41
TVP23B-202ENST00000476139 PRMT7Q9NVM4 692 aaPredicted RBP17.59■□□□□ 0.41
TVP23B-202ENST00000476139 PCDHGC3Q9UN70 934 aa17.59■□□□□ 0.41
TVP23B-202ENST00000476139 BTBD19C9JJ37 291 aa17.58■□□□□ 0.41
TVP23B-202ENST00000476139 CHN1P15882 459 aa17.58■□□□□ 0.41
TVP23B-202ENST00000476139 PHKA2P46019 1235 aa17.58■□□□□ 0.41
TVP23B-202ENST00000476139 BYSLQ13895 437 aaKnown RBP17.58■□□□□ 0.41
TVP23B-202ENST00000476139 SLC10A6Q3KNW5 377 aa17.58■□□□□ 0.41
TVP23B-202ENST00000476139 KIAA0319LQ8IZA0 1049 aa17.58■□□□□ 0.41
TVP23B-202ENST00000476139 SHCBP1Q8NEM2 672 aa17.58■□□□□ 0.41
TVP23B-202ENST00000476139 CXorf38Q8TB03 319 aa17.58■□□□□ 0.41
TVP23B-202ENST00000476139 HAUS1Q96CS2 278 aa17.58■□□□□ 0.41
TVP23B-202ENST00000476139 CXCL16Q9H2A7 254 aa17.58■□□□□ 0.41
TVP23B-202ENST00000476139 DNPEPQ9ULA0 475 aa17.58■□□□□ 0.41
TVP23B-202ENST00000476139 SNAI1O95863 264 aaPredicted RBP17.58■□□□□ 0.4
TVP23B-202ENST00000476139 ZSCAN5DPP0CG00 497 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 IFNAR2P48551 515 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 KYNUQ16719 465 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 LONRF1Q17RB8 773 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 SMTNL2Q2TAL5 461 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 KCNT1Q5JUK3 1230 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 ZNF484Q5JVG2 852 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 MAP1SQ66K74 1059 aaPredicted RBP17.58■□□□□ 0.4
TVP23B-202ENST00000476139 DPH6Q7L8W6 267 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 GSTA5Q7RTV2 222 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 JOSD2Q8TAC2 188 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 MS4A4AQ96JQ5 239 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 CABS1Q96KC9 395 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 CPXM1Q96SM3 734 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 H3BRB1 525 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 RGS16O15492 202 aaPredicted RBP17.58■□□□□ 0.4
TVP23B-202ENST00000476139 GH1P01241 217 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 KRT1P04264 644 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 CDH5P33151 784 aaPredicted RBP17.58■□□□□ 0.4
TVP23B-202ENST00000476139 MAN1A1P33908 653 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 EMC1Q8N766 993 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 GRK7Q8WTQ7 553 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 NLRP7Q8WX94 980 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 PGM2Q96G03 612 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 SEC16BQ96JE7 1060 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 ZNF518BQ9C0D4 1074 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 TUT1Q9H6E5 874 aaKnown RBP17.58■□□□□ 0.4
TVP23B-202ENST00000476139 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.58■□□□□ 0.4
TVP23B-202ENST00000476139 SAE1Q9UBE0 346 aaPredicted RBP17.58■□□□□ 0.4
TVP23B-202ENST00000476139 ANAPC5Q9UJX4 755 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 GINS2Q9Y248 185 aa17.58■□□□□ 0.4
TVP23B-202ENST00000476139 ETS1P14921 441 aa17.57■□□□□ 0.4
TVP23B-202ENST00000476139 ATF2P15336 505 aa17.57■□□□□ 0.4
TVP23B-202ENST00000476139 MICALCLQ6ZW33 695 aa17.57■□□□□ 0.4
TVP23B-202ENST00000476139 ZNF365Q70YC5 407 aa17.57■□□□□ 0.4
TVP23B-202ENST00000476139 RCOR2Q8IZ40 523 aa17.57■□□□□ 0.4
TVP23B-202ENST00000476139 ARFGAP1Q8N6T3 406 aa17.57■□□□□ 0.4
TVP23B-202ENST00000476139 PPTC7Q8NI37 304 aa17.57■□□□□ 0.4
TVP23B-202ENST00000476139 NFKBIZQ9BYH8 718 aa17.57■□□□□ 0.4
TVP23B-202ENST00000476139 BCO2Q9BYV7 579 aa17.57■□□□□ 0.4
TVP23B-202ENST00000476139 CLEC11AQ9Y240 323 aa17.57■□□□□ 0.4
TVP23B-202ENST00000476139 MTHFD1LQ6UB35 978 aa17.57■□□□□ 0.4
TVP23B-202ENST00000476139 ILDR2Q71H61 639 aa17.57■□□□□ 0.4
TVP23B-202ENST00000476139 LINC01465Q8N7H1 131 aa17.57■□□□□ 0.4
TVP23B-202ENST00000476139 SLC4A11Q8NBS3 891 aa17.57■□□□□ 0.4
TVP23B-202ENST00000476139 C3orf20Q8ND61 904 aa17.57■□□□□ 0.4
TVP23B-202ENST00000476139 ELOVL4Q9GZR5 314 aa17.57■□□□□ 0.4
TVP23B-202ENST00000476139 KATNBL1Q9H079 304 aa17.57■□□□□ 0.4
TVP23B-202ENST00000476139 ADAM7Q9H2U9 754 aa17.57■□□□□ 0.4
TVP23B-202ENST00000476139 PNMA3Q9UL41 463 aa17.57■□□□□ 0.4
TVP23B-202ENST00000476139 CEP83Q9Y592 693 aa17.57■□□□□ 0.4
TVP23B-202ENST00000476139 BRCA2P51587 3418 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms