RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 RGL1Q9NZL6 768 aa10.95□□□□□ -0.66
CCHCR1-212ENST00000475684 VAV3Q9UKW4 847 aa10.95□□□□□ -0.66
CCHCR1-212ENST00000475684 BRPF3Q9ULD4 1205 aa10.95□□□□□ -0.66
CCHCR1-212ENST00000475684 USP20Q9Y2K6 914 aa10.95□□□□□ -0.66
CCHCR1-212ENST00000475684 ATMQ13315 3056 aa10.95□□□□□ -0.66
CCHCR1-212ENST00000475684 CACNA1EQ15878 2313 aa10.95□□□□□ -0.66
CCHCR1-212ENST00000475684 PCDH15Q96QU1 1955 aa10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 ARID2Q68CP9 1835 aa10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 B8ZZF3 427 aa10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 K7EQS6 105 aa10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 DGAT1O75907 488 aa10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 SOAT2O75908 522 aa10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 ATXN1LP0C7T5 689 aaKnown RBP10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 HLA-EP13747 358 aa10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 LIG1P18858 919 aa10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 CDC25CP30307 473 aa10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 MCM4P33991 863 aa10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 ADD1P35611 737 aaKnown RBP10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 ZNF33AQ06730 810 aa10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 CTTNQ14247 550 aaKnown RBP10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 EPHA7Q15375 998 aa10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 FAM187BQ17R55 369 aa10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 PLEKHG6Q3KR16 790 aa10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 EEF1DP3Q658K8 133 aa10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 PPP4R3AQ6IN85 833 aa10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 ZBTB8OSQ8IWT0 167 aa10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 TPH2Q8IWU9 490 aa10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 HMGB4Q8WW32 186 aa10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 USP13Q92995 863 aaPredicted RBP10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 SUSD3Q96L08 255 aa10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 TDP1Q9NUW8 608 aa10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 SLC38A7Q9NVC3 462 aa10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 DDX25Q9UHL0 483 aaKnown RBP10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 DNMT3LQ9UJW3 386 aa10.94□□□□□ -0.66
CCHCR1-212ENST00000475684 URB1O60287 2271 aaKnown RBP10.93□□□□□ -0.66
CCHCR1-212ENST00000475684 COL12A1Q99715 3063 aa10.93□□□□□ -0.66
CCHCR1-212ENST00000475684 KIAA1549LQ6ZVL6 1849 aa10.93□□□□□ -0.66
CCHCR1-212ENST00000475684 ANTXRLA6NF34 631 aa10.93□□□□□ -0.66
CCHCR1-212ENST00000475684 E9PAM4 449 aa10.93□□□□□ -0.66
CCHCR1-212ENST00000475684 ERVH48-1M5A8F1 160 aa10.93□□□□□ -0.66
CCHCR1-212ENST00000475684 C7P10643 843 aa10.93□□□□□ -0.66
CCHCR1-212ENST00000475684 HNRNPLP14866 589 aaKnown RBP eCLIP10.93□□□□□ -0.66
CCHCR1-212ENST00000475684 CHMLP26374 656 aa10.93□□□□□ -0.66
CCHCR1-212ENST00000475684 DCAF4L1Q3SXM0 396 aa10.93□□□□□ -0.66
CCHCR1-212ENST00000475684 CENPPQ6IPU0 288 aa10.93□□□□□ -0.66
CCHCR1-212ENST00000475684 MAB21L3Q8N8X9 362 aa10.93□□□□□ -0.66
CCHCR1-212ENST00000475684 TTC16Q8NEE8 873 aa10.93□□□□□ -0.66
CCHCR1-212ENST00000475684 CCDC148Q8NFR7 591 aa10.93□□□□□ -0.66
CCHCR1-212ENST00000475684 PI4K2AQ9BTU6 479 aa10.93□□□□□ -0.66
CCHCR1-212ENST00000475684 KIF9Q9HAQ2 790 aa10.93□□□□□ -0.66
CCHCR1-212ENST00000475684 PRDM16Q9HAZ2 1276 aa10.93□□□□□ -0.66
CCHCR1-212ENST00000475684 DUS2Q9NX74 493 aaKnown RBP10.93□□□□□ -0.66
CCHCR1-212ENST00000475684 TOR4AQ9NXH8 423 aa10.93□□□□□ -0.66
CCHCR1-212ENST00000475684 METRNQ9UJH8 293 aa10.93□□□□□ -0.66
CCHCR1-212ENST00000475684 NAP1L2Q9ULW6 460 aaPredicted RBP10.93□□□□□ -0.66
CCHCR1-212ENST00000475684 APC2O95996 2303 aa10.93□□□□□ -0.66
CCHCR1-212ENST00000475684 KLF18A0A0U1RQI7 1052 aa10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 A0A1W2PQD8 194 aa10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 PRPF3O43395 683 aaKnown RBP10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 SLC28A2O43868 658 aa10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 RPL9P32969 192 aaKnown RBP10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 YARSP54577 528 aaKnown RBP10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 YWHAHQ04917 246 aaPredicted RBP10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 NR1H3Q13133 447 aa10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 GPR17Q13304 367 aa10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 TAF12Q16514 161 aa10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 NCAPH2Q6IBW4 605 aa10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 SLC36A4Q6YBV0 504 aa10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 MAEAQ7L5Y9 396 aa10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 ALLCQ8N6M5 410 aa10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 ATAD1Q8NBU5 361 aa10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 RIN3Q8TB24 985 aa10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 ATP2A3Q93084 1043 aa10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 FAM20AQ96MK3 541 aa10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 CCDC43Q96MW1 224 aaKnown RBP10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 LPIN3Q9BQK8 851 aa10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 OXCT2Q9BYC2 517 aaPredicted RBP10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 C22orf23Q9BZE7 217 aa10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 IL21Q9HBE4 155 aa10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 ZMYM5Q9UJ78 669 aa10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 TIMM13Q9Y5L4 95 aaPredicted RBP10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 MUC22E2RYF6 1773 aaPredicted RBP10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 TEX15Q9BXT5 2789 aa10.92□□□□□ -0.66
CCHCR1-212ENST00000475684 ACACAQ13085 2346 aa10.91□□□□□ -0.66
CCHCR1-212ENST00000475684 ASXL3Q9C0F0 2248 aa10.91□□□□□ -0.66
CCHCR1-212ENST00000475684 PLK4O00444 970 aa10.91□□□□□ -0.66
CCHCR1-212ENST00000475684 ACKR2O00590 384 aa10.91□□□□□ -0.66
CCHCR1-212ENST00000475684 SLC27A2O14975 620 aa10.91□□□□□ -0.66
CCHCR1-212ENST00000475684 SGSM2O43147 1006 aa10.91□□□□□ -0.66
CCHCR1-212ENST00000475684 TLX3O43711 291 aaPredicted RBP10.91□□□□□ -0.66
CCHCR1-212ENST00000475684 SLC37A4O43826 429 aa10.91□□□□□ -0.66
CCHCR1-212ENST00000475684 DKK1O94907 266 aa10.91□□□□□ -0.66
CCHCR1-212ENST00000475684 SLITRK3O94933 977 aa10.91□□□□□ -0.66
CCHCR1-212ENST00000475684 OAZ2O95190 189 aa10.91□□□□□ -0.66
CCHCR1-212ENST00000475684 KLF8O95600 359 aaPredicted RBP10.91□□□□□ -0.66
CCHCR1-212ENST00000475684 IFNAR2P48551 515 aa10.91□□□□□ -0.66
CCHCR1-212ENST00000475684 CSRP3P50461 194 aa10.91□□□□□ -0.66
CCHCR1-212ENST00000475684 NLRP5P59047 1200 aa10.91□□□□□ -0.66
CCHCR1-212ENST00000475684 CXADRP78310 365 aa10.91□□□□□ -0.66
CCHCR1-212ENST00000475684 MRPS21P82921 87 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms