RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 SHCBP1LQ9BZQ2 653 aa18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 ACADSBP45954 432 aa18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 MRPS35P82673 323 aaKnown RBP18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 ATF7IP2Q5U623 682 aa18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 SGF29Q96ES7 293 aa18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 PRDM15P57071 1507 aaPredicted RBP18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 ZBTB22O15209 634 aa18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 DYNC1LI2O43237 492 aaPredicted RBP18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 IL18RAPO95256 599 aa18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 CD4P01730 458 aa18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 IMPDH2P12268 514 aa18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 CYP4A22Q5TCH4 519 aa18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 ZNF512Q96ME7 567 aaPredicted RBP18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 PTPN7P35236 360 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 DEFA1P59665 94 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 DEFA3P59666 94 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 OVGP1Q12889 678 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 BBS7Q8IWZ6 715 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 TBC1D16Q8TBP0 767 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 LPAR1Q92633 364 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 ACSF2Q96CM8 615 aaPredicted RBP18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 TMEM245Q9H330 911 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 PDHBP11177 359 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 ATP6V1B1P15313 513 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 BRD2P25440 801 aaKnown RBP18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 COPAP53621 1224 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 IRX1P78414 480 aaPredicted RBP18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 ARHGEF7Q14155 803 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 CENPPQ6IPU0 288 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 NUDT18Q6ZVK8 323 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 ZNF677Q86XU0 584 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 LRRC34Q8IZ02 419 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 SYN2Q92777 582 aaPredicted RBP18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 PPP1R2P1Q96PQ5 205 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 CATSPERBQ9H7T0 1116 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 SENP2Q9HC62 589 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 RNF181Q9P0P0 153 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 COPG1Q9Y678 874 aaKnown RBP18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 GSNP06396 782 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 TARSP26639 723 aaKnown RBP18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 VHLP40337 213 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 GOLGA7BQ2TAP0 167 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 BRD8Q9H0E9 1235 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 CAAP1Q9H8G2 361 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 LRRIQ3A6PVS8 624 aaPredicted RBP18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 P4HA2O15460 535 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 FDPSP14324 419 aaKnown RBP18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 CHRM3P20309 590 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 RPA1P27694 616 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 HOXD10P28358 340 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 RFC5P40937 340 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 PTK6Q13882 451 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 SLC13A5Q86YT5 568 aaPredicted RBP18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 YAF2Q8IY57 180 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 SERPINB12Q96P63 405 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 ELP3Q9H9T3 547 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 CDC42BPGQ6DT37 1551 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 PPP1R3GB7ZBB8 358 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 TNPO2O14787 897 aaKnown RBP18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 EXTL3O43909 919 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 ETFBP38117 255 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 CCDC142Q17RM4 750 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 VPS50Q96JG6 964 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 ERGIC2Q96RQ1 377 aa18.48■□□□□ 0.55
LPCAT1-202ENST00000475622 EVPLLA8MZ36 301 aa18.47■□□□□ 0.55
LPCAT1-202ENST00000475622 MAGEB2O15479 319 aa18.47■□□□□ 0.55
LPCAT1-202ENST00000475622 NAPEPLDQ6IQ20 393 aa18.47■□□□□ 0.55
LPCAT1-202ENST00000475622 FAM111AQ96PZ2 611 aa18.47■□□□□ 0.55
LPCAT1-202ENST00000475622 NOD2Q9HC29 1040 aa18.47■□□□□ 0.55
LPCAT1-202ENST00000475622 CAB39Q9Y376 341 aaPredicted RBP18.47■□□□□ 0.55
LPCAT1-202ENST00000475622 NFIBO00712 420 aa18.47■□□□□ 0.55
LPCAT1-202ENST00000475622 TPST1O60507 370 aa18.47■□□□□ 0.55
LPCAT1-202ENST00000475622 NUDT2P50583 147 aa18.47■□□□□ 0.55
LPCAT1-202ENST00000475622 SEPT5Q99719 369 aaPredicted RBP18.47■□□□□ 0.55
LPCAT1-202ENST00000475622 PAIP2BQ9ULR5 123 aaKnown RBP18.47■□□□□ 0.55
LPCAT1-202ENST00000475622 TPCN2Q8NHX9 752 aa18.47■□□□□ 0.55
LPCAT1-202ENST00000475622 MOV10L1Q9BXT6 1211 aaKnown RBP18.47■□□□□ 0.55
LPCAT1-202ENST00000475622 THAP2Q9H0W7 228 aa18.47■□□□□ 0.55
LPCAT1-202ENST00000475622 CARD9Q9H257 536 aa18.47■□□□□ 0.55
LPCAT1-202ENST00000475622 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.47■□□□□ 0.557e-7■■□□□ 11.8
LPCAT1-202ENST00000475622 RHOBTB1O94844 696 aa18.47■□□□□ 0.55
LPCAT1-202ENST00000475622 ZBTB7AO95365 584 aa18.47■□□□□ 0.55
LPCAT1-202ENST00000475622 ALBP02768 609 aa18.47■□□□□ 0.55
LPCAT1-202ENST00000475622 USP6NLQ92738 828 aa18.47■□□□□ 0.55
LPCAT1-202ENST00000475622 RBBP8Q99708 897 aa18.47■□□□□ 0.55
LPCAT1-202ENST00000475622 PLA2G12BQ9BX93 195 aa18.47■□□□□ 0.55
LPCAT1-202ENST00000475622 ZRANB3Q5FWF4 1079 aa18.46■□□□□ 0.55
LPCAT1-202ENST00000475622 EFHC1Q5JVL4 640 aa18.46■□□□□ 0.55
LPCAT1-202ENST00000475622 TTC33Q6PID6 262 aaPredicted RBP18.46■□□□□ 0.55
LPCAT1-202ENST00000475622 COL23A1Q86Y22 540 aaPredicted RBP18.46■□□□□ 0.55
LPCAT1-202ENST00000475622 CASKIN2Q8WXE0 1202 aa18.46■□□□□ 0.55
LPCAT1-202ENST00000475622 WBP4O75554 376 aaKnown RBP18.46■□□□□ 0.55
LPCAT1-202ENST00000475622 IRF1P10914 325 aa18.46■□□□□ 0.55
LPCAT1-202ENST00000475622 CTCFP49711 727 aaPredicted RBP18.46■□□□□ 0.55
LPCAT1-202ENST00000475622 C4orf22Q6V702 233 aa18.46■□□□□ 0.55
LPCAT1-202ENST00000475622 CCDC81Q6ZN84 652 aa18.46■□□□□ 0.55
LPCAT1-202ENST00000475622 EFL1Q7Z2Z2 1120 aaKnown RBP18.46■□□□□ 0.55
LPCAT1-202ENST00000475622 LRRC71Q8N4P6 559 aa18.46■□□□□ 0.55
LPCAT1-202ENST00000475622 GPR63Q9BZJ6 419 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms