RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 HES6Q96HZ4 224 aa10.85□□□□□ -0.67
PCCB-213ENST00000475214 HEXIM2Q96MH2 286 aaKnown RBP10.85□□□□□ -0.67
PCCB-213ENST00000475214 C11orf70Q9BRQ4 267 aa10.85□□□□□ -0.67
PCCB-213ENST00000475214 NT5C1AQ9BXI3 368 aa10.85□□□□□ -0.67
PCCB-213ENST00000475214 CXCL16Q9H2A7 254 aa10.85□□□□□ -0.67
PCCB-213ENST00000475214 LHX5Q9H2C1 402 aa10.85□□□□□ -0.67
PCCB-213ENST00000475214 GOLPH3Q9H4A6 298 aa10.85□□□□□ -0.67
PCCB-213ENST00000475214 AGO3Q9H9G7 860 aaKnown RBP10.85□□□□□ -0.67
PCCB-213ENST00000475214 SLC38A7Q9NVC3 462 aa10.85□□□□□ -0.67
PCCB-213ENST00000475214 ARGLU1Q9NWB6 273 aaPredicted RBP10.85□□□□□ -0.67
PCCB-213ENST00000475214 LCMT1Q9UIC8 334 aa10.85□□□□□ -0.67
PCCB-213ENST00000475214 PHF24Q9UPV7 400 aa10.85□□□□□ -0.67
PCCB-213ENST00000475214 ATP11BQ9Y2G3 1177 aa10.85□□□□□ -0.67
PCCB-213ENST00000475214 GIT1Q9Y2X7 761 aa10.85□□□□□ -0.67
PCCB-213ENST00000475214 SNX9Q9Y5X1 595 aa10.85□□□□□ -0.67
PCCB-213ENST00000475214 ALG6Q9Y672 507 aa10.85□□□□□ -0.67
PCCB-213ENST00000475214 SCINQ9Y6U3 715 aa10.85□□□□□ -0.67
PCCB-213ENST00000475214 FRMPD3Q5JV73 1810 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 ARVCFO00192 962 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 PIRO00625 290 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 ZNF623O75123 536 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 TUBBP07437 444 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 MMP8P22894 467 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 RRM1P23921 792 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 HOXD11P31277 338 aaPredicted RBP10.84□□□□□ -0.67
PCCB-213ENST00000475214 CD52P31358 61 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 CDH5P33151 784 aaPredicted RBP10.84□□□□□ -0.67
PCCB-213ENST00000475214 TAF6P49848 677 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 NDST1P52848 882 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 LPIN1Q14693 890 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 CLUL1Q15846 466 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 CNGA2Q16280 664 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 TRIM71Q2Q1W2 868 aaKnown RBP10.84□□□□□ -0.67
PCCB-213ENST00000475214 SGO2Q562F6 1265 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 ZNF618Q5T7W0 954 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 MMS22LQ6ZRQ5 1243 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 Q7L0L9 218 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 MRPL10Q7Z7H8 261 aaKnown RBP10.84□□□□□ -0.67
PCCB-213ENST00000475214 UNC93AQ86WB7 457 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 ERICH1Q86X53 443 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 WHAMMQ8TF30 809 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 TFAP2BQ92481 460 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 TRAIPQ9BWF2 469 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 ELOVL4Q9GZR5 314 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 WNT8AQ9H1J5 351 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 UBN1Q9NPG3 1134 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 ANAPC7Q9UJX3 599 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 STRIP2Q9ULQ0 834 aa10.84□□□□□ -0.67
PCCB-213ENST00000475214 KPNA7A9QM74 516 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 MYO1FO00160 1098 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 PDE2AO00408 941 aaPredicted RBP10.83□□□□□ -0.68
PCCB-213ENST00000475214 PPEF2O14830 753 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 SPOPO43791 374 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 CEP104O60308 925 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 THP07101 528 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 CKBP12277 381 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 COMTP21964 271 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 LRPAP1P30533 357 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 SLC1A1P43005 524 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 TAP1Q03518 808 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 PTP4A2Q12974 167 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 DSC3Q14574 896 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 PTPROQ16827 1216 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 PLEKHA7Q6IQ23 1121 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 DENND1BQ6P3S1 775 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 DPH6Q7L8W6 267 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 MMGT1Q8N4V1 131 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 C1orf131Q8NDD1 294 aaKnown RBP10.83□□□□□ -0.68
PCCB-213ENST00000475214 SPATA4Q8NEY3 305 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 ACTRT1Q8TDG2 376 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 MS4A14Q96JA4 679 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 PPP1R10Q96QC0 940 aaKnown RBP10.83□□□□□ -0.68
PCCB-213ENST00000475214 TWNKQ96RR1 684 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 ZSWIM1Q9BR11 485 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 TRPV6Q9H1D0 765 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 SNX25Q9H3E2 840 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 PARVAQ9NVD7 372 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 MTMR10Q9NXD2 777 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 GDAP2Q9NXN4 497 aa10.83□□□□□ -0.68
PCCB-213ENST00000475214 CHORDC1Q9UHD1 332 aaPredicted RBP10.83□□□□□ -0.68
PCCB-213ENST00000475214 CCDC66A2RUB6 948 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 A8MXQ7 604 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 PTGESO14684 152 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 DDX3YO15523 660 aaKnown RBP10.82□□□□□ -0.68
PCCB-213ENST00000475214 HUS1O60921 280 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 MICAL2O94851 1124 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 FAM163BP0C2L3 166 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 RHOXF2BP0C7M4 288 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 MCM3P25205 808 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 CTNNA2P26232 953 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 MLH1P40692 756 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 RBM10P98175 930 aaKnown RBP10.82□□□□□ -0.68
PCCB-213ENST00000475214 SOX4Q06945 474 aaPredicted RBP10.82□□□□□ -0.68
PCCB-213ENST00000475214 C2orf54Q08AI8 447 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 ORC1Q13415 861 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 MAMLD1Q13495 774 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 DNAJC24Q6P3W2 148 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 MTERF4Q7Z6M4 381 aaKnown RBP10.82□□□□□ -0.68
PCCB-213ENST00000475214 PHLDB2Q86SQ0 1253 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 RASGEF1CQ8N431 466 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms