RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 DMAC2Q9NW81 257 aa12.02□□□□□ -0.49
CKS1B-206ENST00000474215 DDX43Q9NXZ2 648 aaKnown RBP12.02□□□□□ -0.49
CKS1B-206ENST00000474215 KRBA1A5PL33 1030 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 GOLGA6L4A6NEF3 574 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 STK25O00506 426 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 NRG2O14511 850 aaPredicted RBP12.01□□□□□ -0.49
CKS1B-206ENST00000474215 GABRDO14764 452 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 RHOBTB3O94955 611 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 KIF20AO95235 890 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 FGF19O95750 216 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 CST3P01034 146 aaPredicted RBP12.01□□□□□ -0.49
CKS1B-206ENST00000474215 PRR29P0C7W0 189 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 HAPLN1P10915 354 aaPredicted RBP12.01□□□□□ -0.49
CKS1B-206ENST00000474215 GJA1P17302 382 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 LHX1P48742 406 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 MYL7Q01449 175 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 NFE2Q16621 373 aaPredicted RBP12.01□□□□□ -0.49
CKS1B-206ENST00000474215 MGAT5BQ3V5L5 792 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 FAM78AQ5JUQ0 283 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 TANGO2Q6ICL3 276 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 LIMS2Q7Z4I7 341 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 ITIH5Q86UX2 942 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 SLC9A9Q8IVB4 645 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 TMEM105Q8N8V8 129 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 PRSS33Q8NF86 280 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 ZNF516Q92618 1163 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 ELSPBP1Q96BH3 223 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 ZSWIM3Q96MP5 696 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 GPR88Q9GZN0 384 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 GZF1Q9H116 711 aaPredicted RBP12.01□□□□□ -0.49
CKS1B-206ENST00000474215 TMLHEQ9NVH6 421 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 CA14Q9ULX7 337 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 PCDHB5Q9Y5E4 795 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 SCN1AP35498 2009 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 DOCK6Q96HP0 2047 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 NOTCH4Q99466 2003 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 DOCK8Q8NF50 2099 aa12.01□□□□□ -0.49
CKS1B-206ENST00000474215 A0A1W2PRU2 124 aa12□□□□□ -0.49
CKS1B-206ENST00000474215 PI15O43692 258 aa12□□□□□ -0.49
CKS1B-206ENST00000474215 NR3C1P04150 777 aa12□□□□□ -0.49
CKS1B-206ENST00000474215 ATF6P18850 670 aa12□□□□□ -0.49
CKS1B-206ENST00000474215 AOC1P19801 751 aa12□□□□□ -0.49
CKS1B-206ENST00000474215 ACAT1P24752 427 aaKnown RBP12□□□□□ -0.49
CKS1B-206ENST00000474215 PCSK1P29120 753 aa12□□□□□ -0.49
CKS1B-206ENST00000474215 KCNB1Q14721 858 aa12□□□□□ -0.49
CKS1B-206ENST00000474215 VEPH1Q14D04 833 aa12□□□□□ -0.49
CKS1B-206ENST00000474215 TEAD2Q15562 447 aa12□□□□□ -0.49
CKS1B-206ENST00000474215 TMC8Q8IU68 726 aa12□□□□□ -0.49
CKS1B-206ENST00000474215 ADGRF2Q8IZF7 708 aa12□□□□□ -0.49
CKS1B-206ENST00000474215 SHKBP1Q8TBC3 707 aa12□□□□□ -0.49
CKS1B-206ENST00000474215 FAM200AQ8TCP9 573 aa12□□□□□ -0.49
CKS1B-206ENST00000474215 PARD3BQ8TEW8 1205 aa12□□□□□ -0.49
CKS1B-206ENST00000474215 SMARCD2Q92925 531 aa12□□□□□ -0.49
CKS1B-206ENST00000474215 CCDC34Q96HJ3 373 aa12□□□□□ -0.49
CKS1B-206ENST00000474215 ASB16Q96NS5 453 aa12□□□□□ -0.49
CKS1B-206ENST00000474215 MMS19Q96T76 1030 aa12□□□□□ -0.49
CKS1B-206ENST00000474215 PLA2G2FQ9BZM2 168 aa12□□□□□ -0.49
CKS1B-206ENST00000474215 ZFP14Q9HCL3 533 aa12□□□□□ -0.49
CKS1B-206ENST00000474215 ARHGEF3Q9NR81 526 aa12□□□□□ -0.49
CKS1B-206ENST00000474215 ABI2Q9NYB9 513 aaPredicted RBP12□□□□□ -0.49
CKS1B-206ENST00000474215 GTF3C4Q9UKN8 822 aa12□□□□□ -0.49
CKS1B-206ENST00000474215 CALUO43852 315 aaPredicted RBP11.99□□□□□ -0.49
CKS1B-206ENST00000474215 PHACTR2O75167 634 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 FAM163BP0C2L3 166 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 FCARP24071 287 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 CASP4P49662 377 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 AP3M2P53677 418 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 PTPN5P54829 565 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 CLDN10P78369 228 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 PFKPQ01813 784 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 NHLH1Q02575 133 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 TRPC3Q13507 836 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 TAF12Q16514 161 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 WDR72Q3MJ13 1102 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 SLC44A4Q53GD3 710 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 INTS6LQ5JSJ4 861 aaKnown RBP11.99□□□□□ -0.49
CKS1B-206ENST00000474215 CWF19L1Q69YN2 538 aaKnown RBP11.99□□□□□ -0.49
CKS1B-206ENST00000474215 PHLDB3Q6NSJ2 640 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 GAREM2Q75VX8 874 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 OSTM1Q86WC4 334 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 FMR1NBQ8N0W7 255 aaPredicted RBP11.99□□□□□ -0.49
CKS1B-206ENST00000474215 ZSCAN18Q8TBC5 510 aaPredicted RBP11.99□□□□□ -0.49
CKS1B-206ENST00000474215 PLEKHO2Q8TD55 490 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 GIPC2Q8TF65 315 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 KBTBD7Q8WVZ9 684 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 SHDQ96IW2 340 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 PKMYT1Q99640 499 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 LPIN3Q9BQK8 851 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 PI4K2AQ9BTU6 479 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 SLITRK6Q9H5Y7 841 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 TRPV4Q9HBA0 871 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 ZNF334Q9HCZ1 680 aaPredicted RBP11.99□□□□□ -0.49
CKS1B-206ENST00000474215 ABCB6Q9NP58 842 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 MAPK8IP1Q9UQF2 711 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 TRAF3IP3Q9Y228 551 aa11.99□□□□□ -0.49
CKS1B-206ENST00000474215 ZNF318Q5VUA4 2279 aa11.98□□□□□ -0.49
CKS1B-206ENST00000474215 MYBPHLA2RUH7 354 aa11.98□□□□□ -0.49
CKS1B-206ENST00000474215 LRRIQ3A6PVS8 624 aaPredicted RBP11.98□□□□□ -0.49
CKS1B-206ENST00000474215 GALR2O43603 387 aaPredicted RBP11.98□□□□□ -0.49
CKS1B-206ENST00000474215 HCRTO43612 131 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms