RNA–Protein interactions for RNA: ENST00000473883.5

HCLS1-205, Transcript of hematopoietic cell-specific Lyn substrate 1, human

TSL 2

Gene HCLS1, Length 2,710 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCLS1-205	ENST00000473883	TEKT2	Q9UIF3	430 aa		13.27	□□□□□ -0.28
HCLS1-205	ENST00000473883	NUP50	Q9UKX7	468 aa		13.27	□□□□□ -0.28
HCLS1-205	ENST00000473883	MAGED1	Q9Y5V3	778 aa	Predicted RBP	13.27	□□□□□ -0.28
HCLS1-205	ENST00000473883	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.27	□□□□□ -0.29
HCLS1-205	ENST00000473883	ZBTB14	O43829	449 aa		13.27	□□□□□ -0.29
HCLS1-205	ENST00000473883	LRPAP1	P30533	357 aa		13.27	□□□□□ -0.29
HCLS1-205	ENST00000473883	PTPN5	P54829	565 aa		13.27	□□□□□ -0.29
HCLS1-205	ENST00000473883	EIF4A1	P60842	406 aa	Known RBP	13.27	□□□□□ -0.29
HCLS1-205	ENST00000473883	ECT2L	Q008S8	904 aa		13.27	□□□□□ -0.29
HCLS1-205	ENST00000473883	PRKCQ	Q04759	706 aa		13.27	□□□□□ -0.29
HCLS1-205	ENST00000473883	TRIM32	Q13049	653 aa		13.27	□□□□□ -0.29
HCLS1-205	ENST00000473883	CNGA2	Q16280	664 aa		13.27	□□□□□ -0.29
HCLS1-205	ENST00000473883	CERKL	Q49MI3	558 aa	Predicted RBP	13.27	□□□□□ -0.29
HCLS1-205	ENST00000473883	CRTC1	Q6UUV9	634 aa		13.27	□□□□□ -0.29
HCLS1-205	ENST00000473883	LIMS2	Q7Z4I7	341 aa		13.27	□□□□□ -0.29
HCLS1-205	ENST00000473883	RNF135	Q8IUD6	432 aa		13.27	□□□□□ -0.29
HCLS1-205	ENST00000473883	SIRT2	Q8IXJ6	389 aa		13.27	□□□□□ -0.29
HCLS1-205	ENST00000473883	ZFP28	Q8NHY6	868 aa		13.27	□□□□□ -0.29
HCLS1-205	ENST00000473883	GDF3	Q9NR23	364 aa		13.27	□□□□□ -0.29
HCLS1-205	ENST00000473883	RIMS2	Q9UQ26	1411 aa		13.27	□□□□□ -0.29
HCLS1-205	ENST00000473883	DCDC2C	A8MYV0	355 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	SHBG	P04278	402 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	MAGEA11	P43364	429 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	AP2S1	P53680	142 aa	Predicted RBP	13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	SNTA1	Q13424	505 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	EFTUD2	Q15029	972 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	ADCK5	Q3MIX3	580 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	AARS2	Q5JTZ9	985 aa	Known RBP	13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	KBTBD2	Q8IY47	623 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	CCDC33	Q8N5R6	958 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	CCDC51	Q96ER9	411 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	ZNF717	Q9BY31	904 aa	Predicted RBP	13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	EMILIN3	Q9NT22	766 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	ZDHHC7	Q9NXF8	308 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	AMACR	Q9UHK6	382 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	FBXO2	Q9UK22	296 aa	Predicted RBP	13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	NOB1	Q9ULX3	412 aa	Known RBP	13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	ARL2BP	Q9Y2Y0	163 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883		H0YGN5	161 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	MAPK13	O15264	365 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	PIGN	O95427	931 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	ITGB1	P05556	798 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	CYP3A4	P08684	503 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	ITGA2	P17301	1181 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	CYP3A5	P20815	502 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	SHMT1	P34896	483 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	PRKCI	P41743	596 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	MASP1	P48740	699 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	NLRP11	P59045	1033 aa	Known RBP	13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	DALRD3	Q5D0E6	543 aa	Known RBP	13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	POTEH	Q6S545	545 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	OR6C4	Q8NGE1	309 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	AIDA	Q96BJ3	306 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	ZNF486	Q96H40	463 aa	Predicted RBP	13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	SELENOS	Q9BQE4	189 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	THAP9	Q9H5L6	903 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	TLE6	Q9H808	572 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	ATP13A1	Q9HD20	1204 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	POLE3	Q9NRF9	147 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	FAM8A1	Q9UBU6	413 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	PCDHGA10	Q9Y5H3	936 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	NFS1	Q9Y697	457 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	KDM3A	Q9Y4C1	1321 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883		A0A1B0GWJ7	208 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	CCDC160	A6NGH7	325 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883		A6NL46	340 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	AREL1	O15033	823 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	CCDC22	O60826	627 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	CLN5	O75503	358 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	PCSK2	P16519	638 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	PBLD	P30039	288 aa	Predicted RBP	13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	PXDC1	Q5TGL8	231 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	GTF2IRD2B	Q6EKJ0	949 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	ABRAXAS1	Q6UWZ7	409 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	PIK3AP1	Q6ZUJ8	805 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	GTF2IRD2	Q86UP8	949 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	KSR1	Q8IVT5	923 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	ADGRG5	Q8IZF4	528 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	ADAMTS16	Q8TE57	1224 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	TRIM63	Q969Q1	353 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	PLEKHA8	Q96JA3	519 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	ECSIT	Q9BQ95	431 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	INTS2	Q9H0H0	1204 aa	Known RBP	13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	CYP4F12	Q9HCS2	524 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	PNMA3	Q9UL41	463 aa		13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	RPH3A	Q9Y2J0	694 aa	Predicted RBP	13.26	□□□□□ -0.29
HCLS1-205	ENST00000473883	FLT1	P17948	1338 aa		13.25	□□□□□ -0.29
HCLS1-205	ENST00000473883	TNR	Q92752	1358 aa		13.25	□□□□□ -0.29
HCLS1-205	ENST00000473883		A0A0G2JS52	829 aa		13.25	□□□□□ -0.29
HCLS1-205	ENST00000473883		H0Y858	1186 aa		13.25	□□□□□ -0.29
HCLS1-205	ENST00000473883	HOXC11	O43248	304 aa	Predicted RBP	13.25	□□□□□ -0.29
HCLS1-205	ENST00000473883	ENTPD5	O75356	428 aa		13.25	□□□□□ -0.29
HCLS1-205	ENST00000473883	USP1	O94782	785 aa		13.25	□□□□□ -0.29
HCLS1-205	ENST00000473883	BAG2	O95816	211 aa		13.25	□□□□□ -0.29
HCLS1-205	ENST00000473883	PRKAR2A	P13861	404 aa	Known RBP	13.25	□□□□□ -0.29
HCLS1-205	ENST00000473883	GFAP	P14136	432 aa		13.25	□□□□□ -0.29
HCLS1-205	ENST00000473883	NEK3	P51956	506 aa		13.25	□□□□□ -0.29
HCLS1-205	ENST00000473883	VCP	P55072	806 aa	Known RBP	13.25	□□□□□ -0.29
HCLS1-205	ENST00000473883	GRIN1	Q05586	938 aa		13.25	□□□□□ -0.29
HCLS1-205	ENST00000473883	INO80D	Q53TQ3	878 aa	Predicted RBP	13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 92 ms