RNA–Protein interactions for RNA: ENST00000473843.1

MACF1-215, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-215ENST00000473843 SUSD3Q96L08 255 aa12.18□□□□□ -0.46
MACF1-215ENST00000473843 SMG9Q9H0W8 520 aaKnown RBP12.18□□□□□ -0.46
MACF1-215ENST00000473843 POLR3FQ9H1D9 316 aaPredicted RBP12.18□□□□□ -0.46
MACF1-215ENST00000473843 SLC38A7Q9NVC3 462 aa12.18□□□□□ -0.46
MACF1-215ENST00000473843 DAXXQ9UER7 740 aaPredicted RBP12.18□□□□□ -0.46
MACF1-215ENST00000473843 DDX25Q9UHL0 483 aaKnown RBP12.18□□□□□ -0.46
MACF1-215ENST00000473843 ZMYM5Q9UJ78 669 aa12.18□□□□□ -0.46
MACF1-215ENST00000473843 NUB1Q9Y5A7 615 aa12.18□□□□□ -0.46
MACF1-215ENST00000473843 CCDC196A0A1B0GTZ2 297 aa12.17□□□□□ -0.46
MACF1-215ENST00000473843 SMIM28A0A1B0GU29 152 aa12.17□□□□□ -0.46
MACF1-215ENST00000473843 SLC27A2O14975 620 aa12.17□□□□□ -0.46
MACF1-215ENST00000473843 GJB3O75712 270 aa12.17□□□□□ -0.46
MACF1-215ENST00000473843 ALDH1A2O94788 518 aa12.17□□□□□ -0.46
MACF1-215ENST00000473843 GSPT1P15170 499 aaKnown RBP12.17□□□□□ -0.46
MACF1-215ENST00000473843 CDC25CP30307 473 aa12.17□□□□□ -0.46
MACF1-215ENST00000473843 GJA4P35212 333 aa12.17□□□□□ -0.46
MACF1-215ENST00000473843 CYP4F8P98187 520 aa12.17□□□□□ -0.46
MACF1-215ENST00000473843 CFHR1Q03591 330 aa12.17□□□□□ -0.46
MACF1-215ENST00000473843 PRPF4BQ13523 1007 aaKnown RBP12.17□□□□□ -0.46
MACF1-215ENST00000473843 PPP4R3AQ6IN85 833 aa12.17□□□□□ -0.46
MACF1-215ENST00000473843 DNAJB7Q7Z6W7 309 aaPredicted RBP12.17□□□□□ -0.46
MACF1-215ENST00000473843 SLCO6A1Q86UG4 719 aa12.17□□□□□ -0.46
MACF1-215ENST00000473843 ITIH5Q86UX2 942 aa12.17□□□□□ -0.46
MACF1-215ENST00000473843 ZBTB8OSQ8IWT0 167 aa12.17□□□□□ -0.46
MACF1-215ENST00000473843 CPA6Q8N4T0 437 aa12.17□□□□□ -0.46
MACF1-215ENST00000473843 USP33Q8TEY7 942 aa12.17□□□□□ -0.46
MACF1-215ENST00000473843 WHAMMQ8TF30 809 aa12.17□□□□□ -0.46
MACF1-215ENST00000473843 RLN3Q8WXF3 142 aa12.17□□□□□ -0.46
MACF1-215ENST00000473843 DDX12PQ92771 950 aa12.17□□□□□ -0.46
MACF1-215ENST00000473843 FAM20AQ96MK3 541 aa12.17□□□□□ -0.46
MACF1-215ENST00000473843 IPO9Q96P70 1041 aaKnown RBP12.17□□□□□ -0.46
MACF1-215ENST00000473843 GCNAQ96QF7 691 aa12.17□□□□□ -0.46
MACF1-215ENST00000473843 LARP6Q9BRS8 491 aaKnown RBP12.17□□□□□ -0.46
MACF1-215ENST00000473843 CRISPLD1Q9H336 500 aa12.17□□□□□ -0.46
MACF1-215ENST00000473843 RGL1Q9NZL6 768 aa12.17□□□□□ -0.46
MACF1-215ENST00000473843 KIAA1522Q9P206 1035 aaPredicted RBP12.17□□□□□ -0.46
MACF1-215ENST00000473843 MMP17Q9ULZ9 603 aa12.17□□□□□ -0.46
MACF1-215ENST00000473843 TEP1Q99973 2627 aaKnown RBP12.17□□□□□ -0.46
MACF1-215ENST00000473843 KLF18A0A0U1RQI7 1052 aa12.16□□□□□ -0.46
MACF1-215ENST00000473843 TRABD2BA6NFA1 517 aa12.16□□□□□ -0.46
MACF1-215ENST00000473843 PRPF3O43395 683 aaKnown RBP12.16□□□□□ -0.46
MACF1-215ENST00000473843 SLC37A4O43826 429 aa12.16□□□□□ -0.46
MACF1-215ENST00000473843 SYPP08247 313 aa12.16□□□□□ -0.46
MACF1-215ENST00000473843 ADD1P35611 737 aaKnown RBP12.16□□□□□ -0.46
MACF1-215ENST00000473843 EMP3P54852 163 aa12.16□□□□□ -0.46
MACF1-215ENST00000473843 DUSP4Q13115 394 aa12.16□□□□□ -0.46
MACF1-215ENST00000473843 BYSLQ13895 437 aaKnown RBP12.16□□□□□ -0.46
MACF1-215ENST00000473843 CTTNQ14247 550 aaKnown RBP12.16□□□□□ -0.46
MACF1-215ENST00000473843 PDGFRLQ15198 375 aa12.16□□□□□ -0.46
MACF1-215ENST00000473843 CRY1Q16526 586 aa12.16□□□□□ -0.46
MACF1-215ENST00000473843 ARSIQ5FYB1 569 aa12.16□□□□□ -0.46
MACF1-215ENST00000473843 CC2D1AQ6P1N0 951 aaPredicted RBP12.16□□□□□ -0.46
MACF1-215ENST00000473843 TTC30AQ86WT1 665 aa12.16□□□□□ -0.46
MACF1-215ENST00000473843 CMTM8Q8IZV2 173 aa12.16□□□□□ -0.46
MACF1-215ENST00000473843 DYDC2Q96IM9 177 aa12.16□□□□□ -0.46
MACF1-215ENST00000473843 PGLYRP2Q96PD5 576 aa12.16□□□□□ -0.46
MACF1-215ENST00000473843 OXCT2Q9BYC2 517 aaPredicted RBP12.16□□□□□ -0.46
MACF1-215ENST00000473843 KIF9Q9HAQ2 790 aa12.16□□□□□ -0.46
MACF1-215ENST00000473843 KCNMB3Q9NPA1 279 aa12.16□□□□□ -0.46
MACF1-215ENST00000473843 AP5Z1O43299 807 aa12.15□□□□□ -0.46
MACF1-215ENST00000473843 RPL9P32969 192 aaKnown RBP12.15□□□□□ -0.46
MACF1-215ENST00000473843 MCM4P33991 863 aa12.15□□□□□ -0.46
MACF1-215ENST00000473843 AVPR1AP37288 418 aa12.15□□□□□ -0.46
MACF1-215ENST00000473843 BFSP1Q12934 665 aa12.15□□□□□ -0.46
MACF1-215ENST00000473843 NBR1Q14596 966 aa12.15□□□□□ -0.46
MACF1-215ENST00000473843 TTC22Q5TAA0 569 aa12.15□□□□□ -0.46
MACF1-215ENST00000473843 EEF1DP3Q658K8 133 aa12.15□□□□□ -0.46
MACF1-215ENST00000473843 KRT25Q7Z3Z0 450 aa12.15□□□□□ -0.46
MACF1-215ENST00000473843 CCDC43Q96MW1 224 aaKnown RBP12.15□□□□□ -0.46
MACF1-215ENST00000473843 FCRL3Q96P31 734 aaPredicted RBP12.15□□□□□ -0.46
MACF1-215ENST00000473843 SLC46A2Q9BY10 475 aa12.15□□□□□ -0.46
MACF1-215ENST00000473843 C2orf40Q9H1Z8 148 aa12.15□□□□□ -0.46
MACF1-215ENST00000473843 ECT2Q9H8V3 914 aa12.15□□□□□ -0.46
MACF1-215ENST00000473843 TOPORSQ9NS56 1045 aaPredicted RBP12.15□□□□□ -0.46
MACF1-215ENST00000473843 VPS54Q9P1Q0 977 aa12.15□□□□□ -0.46
MACF1-215ENST00000473843 CCL26Q9Y258 94 aa12.15□□□□□ -0.46
MACF1-215ENST00000473843 ANK1P16157 1881 aa12.14□□□□□ -0.47
MACF1-215ENST00000473843 TEX51A0A1B0GUA7 166 aa12.14□□□□□ -0.47
MACF1-215ENST00000473843 ACKR2O00590 384 aa12.14□□□□□ -0.47
MACF1-215ENST00000473843 CBFA2T3O75081 653 aa12.14□□□□□ -0.47
MACF1-215ENST00000473843 OAZ2O95190 189 aa12.14□□□□□ -0.47
MACF1-215ENST00000473843 OR4Q2P0C623 313 aa12.14□□□□□ -0.47
MACF1-215ENST00000473843 ITPKBP27987 946 aa12.14□□□□□ -0.47
MACF1-215ENST00000473843 AKAP17AQ02040 695 aaKnown RBP12.14□□□□□ -0.47
MACF1-215ENST00000473843 KCNC4Q03721 635 aa12.14□□□□□ -0.47
MACF1-215ENST00000473843 YWHAHQ04917 246 aaPredicted RBP12.14□□□□□ -0.47
MACF1-215ENST00000473843 SRSF1Q07955 248 aaKnown RBP eCLIP12.14□□□□□ -0.473e-7■■■■□ 22.3
MACF1-215ENST00000473843 GPR17Q13304 367 aa12.14□□□□□ -0.47
MACF1-215ENST00000473843 CAMK2BQ13554 666 aa12.14□□□□□ -0.47
MACF1-215ENST00000473843 MAP7D1Q3KQU3 841 aa12.14□□□□□ -0.47
MACF1-215ENST00000473843 C2orf27AQ580R0 203 aa12.14□□□□□ -0.47
MACF1-215ENST00000473843 XKR4Q5GH76 650 aa12.14□□□□□ -0.47
MACF1-215ENST00000473843 PPP1R15BQ5SWA1 713 aa12.14□□□□□ -0.47
MACF1-215ENST00000473843 CREB3L3Q68CJ9 461 aa12.14□□□□□ -0.47
MACF1-215ENST00000473843 NCAPH2Q6IBW4 605 aa12.14□□□□□ -0.47
MACF1-215ENST00000473843 CENPPQ6IPU0 288 aa12.14□□□□□ -0.47
MACF1-215ENST00000473843 APBB1IPQ7Z5R6 666 aaPredicted RBP12.14□□□□□ -0.47
MACF1-215ENST00000473843 TPH2Q8IWU9 490 aa12.14□□□□□ -0.47
MACF1-215ENST00000473843 GALNT15Q8N3T1 639 aa12.14□□□□□ -0.47
MACF1-215ENST00000473843 FRMD1Q8N878 549 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms