RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 CSH1P0DML2 217 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 CSH2P0DML3 217 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 NR2F1P10589 423 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 CYP2A6P11509 494 aaPredicted RBP6.47□□□□□ -1.37
RTF1-203ENST00000473214 LAG3P18627 525 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 MLH1P40692 756 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 MATR3P43243 847 aaKnown RBP eCLIP6.47□□□□□ -1.37
RTF1-203ENST00000473214 MTNR1BP49286 362 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 SULT1E1P49888 294 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 KIF11P52732 1056 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 C21orf58P58505 322 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 CCDC15Q0P6D6 951 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 SLC14A1Q13336 389 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 IDI1Q13907 227 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 MAJINQ3KP22 176 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 RABL6Q3YEC7 729 aaPredicted RBP6.47□□□□□ -1.37
RTF1-203ENST00000473214 CCDC157Q569K6 752 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 CCDC183Q5T5S1 534 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 ZNF648Q5T619 568 aaPredicted RBP6.47□□□□□ -1.37
RTF1-203ENST00000473214 MAP3K21Q5TCX8 1036 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 CIAPIN1Q6FI81 312 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 C11orf88Q6PI97 169 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 DCLRE1AQ6PJP8 1040 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 ARHGEF18Q6ZSZ5 1173 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 PLEKHM3Q6ZWE6 761 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 LPCAT2Q7L5N7 544 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 THAP5Q7Z6K1 395 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 TAX1BP1Q86VP1 789 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 HERC6Q8IVU3 1022 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 ELOA2Q8IYF1 753 aaPredicted RBP6.47□□□□□ -1.37
RTF1-203ENST00000473214 TAGAPQ8N103 731 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 SRBD1Q8N5C6 995 aaKnown RBP6.47□□□□□ -1.37
RTF1-203ENST00000473214 OR10H5Q8NGA6 315 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 CTCFLQ8NI51 663 aaPredicted RBP6.47□□□□□ -1.37
RTF1-203ENST00000473214 NEK9Q8TD19 979 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 CFAP36Q96G28 342 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 PLPPR2Q96GM1 343 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 ACSBG1Q96GR2 724 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 PPP1R13BQ96KQ4 1090 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 CCDC140Q96MF4 163 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 PDCD2LQ9BRP1 358 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 CLEC4MQ9H2X3 399 aaPredicted RBP6.47□□□□□ -1.37
RTF1-203ENST00000473214 C14orf93Q9H972 538 aaKnown RBP6.47□□□□□ -1.37
RTF1-203ENST00000473214 PDE7BQ9NP56 450 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 GJB4Q9NTQ9 266 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 TMEM160Q9NX00 188 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 AKAP7Q9P0M2 348 aaPredicted RBP6.47□□□□□ -1.37
RTF1-203ENST00000473214 WHRNQ9P202 907 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 ZC3H7BQ9UGR2 993 aaKnown RBP6.47□□□□□ -1.37
RTF1-203ENST00000473214 HOOK1Q9UJC3 728 aaKnown RBP6.47□□□□□ -1.37
RTF1-203ENST00000473214 SQORQ9Y6N5 450 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 EIF2AK4Q9P2K8 1649 aaKnown RBP6.47□□□□□ -1.37
RTF1-203ENST00000473214 ADGRB3O60242 1522 aa6.46□□□□□ -1.37
RTF1-203ENST00000473214 BRWD3Q6RI45 1802 aa6.46□□□□□ -1.37
RTF1-203ENST00000473214 LCHNA4D1U4 455 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 F8W8V4 182 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 UBXN8O00124 270 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 NEMFO60524 1076 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 SEC22BO75396 215 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 PGM3O95394 542 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 ZFYVE9O95405 1425 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 HEXBP07686 556 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 ADH5P11766 374 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 JUPP14923 745 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 ACSL1P33121 698 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 IL12RB1P42701 662 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 DNM2P50570 870 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 CCR5P51681 352 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 SLC16A1P53985 500 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 INHBEP58166 350 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 PHC1P78364 1004 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 GSTM4Q03013 218 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 MST1RQ04912 1400 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 PCDH1Q08174 1060 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 RABEP1Q15276 862 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 ADIPOQQ15848 244 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 GEN1Q17RS7 908 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 TMEM201Q5SNT2 666 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 SLC35F1Q5T1Q4 408 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 LRFN4Q6PJG9 635 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 R3HCC1LQ7Z5L2 792 aaKnown RBP6.46□□□□□ -1.38
RTF1-203ENST00000473214 CPLX4Q7Z7G2 160 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 TMEM110Q86TL2 294 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 LURAP1LQ8IV03 231 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 PHACTR4Q8IZ21 702 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 C2orf69Q8N8R5 385 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 ETNPPLQ8TBG4 499 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 STT3BQ8TCJ2 826 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 PIGOQ8TEQ8 1089 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 AFG1LQ8WV93 481 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 PTPRUQ92729 1446 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 COG8Q96MW5 612 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 ACAP3Q96P50 834 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 ORAI2Q96SN7 254 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 NTPCRQ9BSD7 190 aaKnown RBP6.46□□□□□ -1.38
RTF1-203ENST00000473214 GPR63Q9BZJ6 419 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 CD244Q9BZW8 370 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 THAP9Q9H5L6 903 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 YY1AP1Q9H869 796 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 ERVMER34-1Q9H9K5 563 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms