RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 BMS1Q14692 1282 aaKnown RBP3.99□□□□□ -1.77
XRN1-209ENST00000472625 WTAPQ15007 396 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 SMAD2Q15796 467 aaKnown RBP3.99□□□□□ -1.77
XRN1-209ENST00000472625 PRSS53Q2L4Q9 553 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 TRIM71Q2Q1W2 868 aaKnown RBP3.99□□□□□ -1.77
XRN1-209ENST00000472625 HSDL1Q3SXM5 330 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 PLEKHN1Q494U1 663 aaPredicted RBP3.99□□□□□ -1.77
XRN1-209ENST00000472625 ZNF385BQ569K4 471 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 HERC4Q5GLZ8 1057 aaPredicted RBP3.99□□□□□ -1.77
XRN1-209ENST00000472625 SLC35F1Q5T1Q4 408 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 TMEM63BQ5T3F8 832 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 TCERG1LQ5VWI1 586 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 HLA-DQA1Q5Y7H0 255 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 EEF1DP3Q658K8 133 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 CWF19L1Q69YN2 538 aaKnown RBP3.99□□□□□ -1.77
XRN1-209ENST00000472625 CWC27Q6UX04 472 aaKnown RBP3.99□□□□□ -1.77
XRN1-209ENST00000472625 TSHZ1Q6ZSZ6 1077 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 EP400NLQ6ZTU2 488 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 RASGRP2Q7LDG7 609 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 ADAT2Q7Z6V5 191 aaKnown RBP3.99□□□□□ -1.77
XRN1-209ENST00000472625 ZNF589Q86UQ0 364 aaPredicted RBP3.99□□□□□ -1.77
XRN1-209ENST00000472625 HOMER1Q86YM7 354 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 CPNE8Q86YQ8 564 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 IGDCC3Q8IVU1 814 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 CMTR2Q8IYT2 770 aaKnown RBP3.99□□□□□ -1.77
XRN1-209ENST00000472625 TMTC2Q8N394 836 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 ZNF713Q8N859 430 aaPredicted RBP3.99□□□□□ -1.77
XRN1-209ENST00000472625 DBF4BQ8NFT6 615 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 NCOA7Q8NI08 942 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 SMARCC2Q8TAQ2 1214 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 PLEKHO2Q8TD55 490 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 OTUD7AQ8TE49 926 aaPredicted RBP3.99□□□□□ -1.77
XRN1-209ENST00000472625 MTMR8Q96EF0 704 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 RRP36Q96EU6 259 aaKnown RBP3.99□□□□□ -1.77
XRN1-209ENST00000472625 SIGLEC10Q96LC7 697 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 TAAR1Q96RJ0 339 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 CTAGE1Q96RT6 745 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 CDCA3Q99618 268 aaPredicted RBP3.99□□□□□ -1.77
XRN1-209ENST00000472625 C17orf80Q9BSJ5 609 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 C16orf70Q9BSU1 422 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 UBA5Q9GZZ9 404 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 SMARCAD1Q9H4L7 1026 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 EPHX3Q9H6B9 360 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 PARD6AQ9NPB6 346 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 ST7Q9NRC1 585 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 CLEC1BQ9P126 229 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 STK39Q9UEW8 545 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 TUBE1Q9UJT0 475 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 PCDHA5Q9Y5H7 936 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 MYO15AQ9UKN7 3530 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 WDFY4Q6ZS81 3184 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 USP34Q70CQ2 3546 aa3.99□□□□□ -1.77
XRN1-209ENST00000472625 COL4A4P53420 1690 aaPredicted RBP3.98□□□□□ -1.77
XRN1-209ENST00000472625 H3BQ06 376 aaPredicted RBP3.98□□□□□ -1.77
XRN1-209ENST00000472625 IFIT3O14879 490 aaKnown RBP3.98□□□□□ -1.77
XRN1-209ENST00000472625 N4BP3O15049 544 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 LCP1P13796 627 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 PLS3P13797 630 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 IL9P15248 144 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 PTGS1P23219 599 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 TACR1P25103 407 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 HOXA13P31271 388 aaPredicted RBP3.98□□□□□ -1.77
XRN1-209ENST00000472625 L1CAMP32004 1257 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 PPM1AP35813 382 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 BMPR1AP36894 532 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 NOP2P46087 812 aaKnown RBP3.98□□□□□ -1.77
XRN1-209ENST00000472625 AFF3P51826 1226 aaKnown RBP3.98□□□□□ -1.77
XRN1-209ENST00000472625 AMPD2Q01433 879 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 MTMR1Q13613 665 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 GNL2Q13823 731 aaKnown RBP3.98□□□□□ -1.77
XRN1-209ENST00000472625 GRM4Q14833 912 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 FXNQ16595 210 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 TCEAL5Q5H9L2 206 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 MCTP2Q6DN12 878 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 CASC1Q6TDU7 716 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 BMP8AQ7Z5Y6 402 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 CHD1LQ86WJ1 897 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 SMC5Q8IY18 1101 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 NME8Q8N427 588 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 NAT16Q8N8M0 369 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 SYT8Q8NBV8 401 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.98□□□□□ -1.77
XRN1-209ENST00000472625 FEZF2Q8TBJ5 459 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 MZB1Q8WU39 189 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 LMBR1Q8WVP7 490 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 GLG1Q92896 1179 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 KCNC2Q96PR1 638 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 GPR20Q99678 358 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 SDF4Q9BRK5 362 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 SPZ1Q9BXG8 430 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 LNPKQ9C0E8 428 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 RNPEPQ9H4A4 650 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 RIOX1Q9H6W3 641 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 VAT1LQ9HCJ6 419 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 ARHGEF4Q9NR80 690 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 C1orf112Q9NSG2 853 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 COL20A1Q9P218 1284 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 MAD2L2Q9UI95 211 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 CD207Q9UJ71 328 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 NPFFR2Q9Y5X5 522 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms