RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	PPP1R2P3	Q6NXS1	205 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	SLFN11	Q7Z7L1	901 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	ZNF598	Q86UK7	904 aa	Known RBP	11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	NT5DC3	Q86UY8	548 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	ERICH1	Q86X53	443 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	ADGRF2	Q8IZF7	708 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	WDTC1	Q8N5D0	677 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	C12orf29	Q8N999	325 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	DBF4B	Q8NFT6	615 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	UBA3	Q8TBC4	463 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	SCLY	Q96I15	445 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	LPIN3	Q9BQK8	851 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	FTHL17	Q9BXU8	183 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	PPP1R12C	Q9BZL4	782 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	HIPK3	Q9H422	1215 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	DPEP3	Q9H4B8	488 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	FAM124B	Q9H5Z6	455 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	AVEN	Q9NQS1	362 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	FAM49B	Q9NUQ9	324 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	UVRAG	Q9P2Y5	699 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	ATP11B	Q9Y2G3	1177 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	NME7	Q9Y5B8	376 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	SCN5A	Q14524	2016 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267		O00370	1275 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	PITPNM1	O00562	1244 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	KCNK3	O14649	394 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CTIF	O43310	598 aa	Known RBP	11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	MTA2	O94776	668 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CALB1	P05937	261 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	PRLR	P16471	622 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	MMP8	P22894	467 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	HADHB	P55084	474 aa	Known RBP	11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	TLE2	Q04725	743 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	C1QBP	Q07021	282 aa	Known RBP	11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	PTP4A2	Q12974	167 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	GRIK3	Q13003	919 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	GPNMB	Q14956	572 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	TCEAL1	Q15170	157 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CNGA2	Q16280	664 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	GOLGA7B	Q2TAP0	167 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CYP4A22	Q5TCH4	519 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CCDC181	Q5TID7	509 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	GLB1L	Q6UWU2	654 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	DSTYK	Q6XUX3	929 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	UNC93A	Q86WB7	457 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	KBTBD7	Q8WVZ9	684 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	SEPT8	Q92599	483 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CALR3	Q96L12	384 aa	Known RBP	11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	SENP8	Q96LD8	212 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	PAAF1	Q9BRP4	392 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	ZNF518B	Q9C0D4	1074 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	LHX5	Q9H2C1	402 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	ANAPC7	Q9UJX3	599 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	KIAA1257	Q9ULG3	409 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	STXBP5L	Q9Y2K9	1186 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	ALG6	Q9Y672	507 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CTAGE15	A4D2H0	777 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	TADA3	O75528	432 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	GJB6	O95452	261 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	EOMES	O95936	686 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CTAGE8	P0CG41	777 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	LMO2	P25791	158 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	RPL9	P32969	192 aa	Known RBP	11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CDH5	P33151	784 aa	Predicted RBP	11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CKAP4	Q07065	602 aa	Known RBP	11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	FAAP100	Q0VG06	881 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	PAN2	Q504Q3	1202 aa	Known RBP	11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	PLEKHG4	Q58EX7	1191 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	TEX35	Q5T0J7	233 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	WSCD1	Q658N2	575 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	C11orf63	Q6NUN7	778 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	ANKRD33	Q7Z3H0	272 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CTAGE6	Q86UF2	777 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	OSTM1	Q86WC4	334 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CTAGE4	Q8IX94	777 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	PDCL2	Q8N4E4	241 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	TOP6BL	Q8N6T0	577 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	URGCP	Q8TCY9	931 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	MS4A14	Q96JA4	679 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	VCPIP1	Q96JH7	1222 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	TRIM7	Q9C029	511 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	DNAI2	Q9GZS0	605 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	SYNC	Q9H7C4	482 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	ABCB6	Q9NP58	842 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	SMARCAL1	Q9NZC9	954 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	EHD2	Q9NZN4	543 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CYTH4	Q9UIA0	394 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	TSPAN16	Q9UKR8	245 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	TET1	Q8NFU7	2136 aa		11.41	□□□□□ -0.58
MRPS18B-208	ENST00000472267	GOLGA8S	H3BPF8	625 aa		11.4	□□□□□ -0.58
MRPS18B-208	ENST00000472267	ENPP3	O14638	875 aa		11.4	□□□□□ -0.58
MRPS18B-208	ENST00000472267	COMT	P21964	271 aa		11.4	□□□□□ -0.58
MRPS18B-208	ENST00000472267	WARS	P23381	471 aa	Known RBP	11.4	□□□□□ -0.58
MRPS18B-208	ENST00000472267	ADORA2B	P29275	332 aa		11.4	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CYP2C18	P33260	490 aa		11.4	□□□□□ -0.58
MRPS18B-208	ENST00000472267	RNASE9	P60153	205 aa	Known RBP	11.4	□□□□□ -0.58
MRPS18B-208	ENST00000472267	FAM189B	P81408	668 aa		11.4	□□□□□ -0.58
MRPS18B-208	ENST00000472267	TUSC3	Q13454	348 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms